RNA–Protein interactions for RNA: ENST00000574266.1

ABR-227, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-227ENST00000574266 ARHGEF28Q8N1W1 1705 aaKnown RBP24.91■■□□□ 1.58
ABR-227ENST00000574266 ACEP12821 1306 aa24.9■■□□□ 1.58
ABR-227ENST00000574266 ITSN1Q15811 1721 aa24.9■■□□□ 1.58
ABR-227ENST00000574266 L3MBTL2Q969R5 705 aa24.9■■□□□ 1.58
ABR-227ENST00000574266 KRT27Q7Z3Y8 459 aa24.89■■□□□ 1.58
ABR-227ENST00000574266 PLEKHG3A1L390 1219 aa24.88■■□□□ 1.57
ABR-227ENST00000574266 ONECUT3O60422 494 aaPredicted RBP24.88■■□□□ 1.57
ABR-227ENST00000574266 ABTB2Q8N961 1025 aa24.88■■□□□ 1.57
ABR-227ENST00000574266 NWD2Q9ULI1 1742 aa24.88■■□□□ 1.57
ABR-227ENST00000574266 ATP7BP35670 1465 aa24.86■■□□□ 1.57
ABR-227ENST00000574266 EVA1CP58658 441 aa24.86■■□□□ 1.57
ABR-227ENST00000574266 NUTM2GQ5VZR2 741 aa24.86■■□□□ 1.57
ABR-227ENST00000574266 SIN3AQ96ST3 1273 aa24.86■■□□□ 1.57
ABR-227ENST00000574266 FAM98CQ17RN3 349 aaKnown RBP24.85■■□□□ 1.57
ABR-227ENST00000574266 TRPM3Q9HCF6 1732 aaPredicted RBP24.85■■□□□ 1.57
ABR-227ENST00000574266 GLI3P10071 1580 aa24.84■■□□□ 1.57
ABR-227ENST00000574266 PLCH1Q4KWH8 1693 aa24.84■■□□□ 1.57
ABR-227ENST00000574266 NLRP13Q86W25 1043 aa24.83■■□□□ 1.57
ABR-227ENST00000574266 CABP2Q9NPB3 220 aa24.83■■□□□ 1.57
ABR-227ENST00000574266 POLR3AO14802 1390 aaPredicted RBP24.82■■□□□ 1.56
ABR-227ENST00000574266 ALS2Q96Q42 1657 aa24.82■■□□□ 1.56
ABR-227ENST00000574266 BLMP54132 1417 aaPredicted RBP24.82■■□□□ 1.56
ABR-227ENST00000574266 ZC3H6P61129 1189 aaKnown RBP24.82■■□□□ 1.56
ABR-227ENST00000574266 COL14A1Q05707 1796 aaKnown RBP24.82■■□□□ 1.56
ABR-227ENST00000574266 EVC2Q86UK5 1308 aa24.82■■□□□ 1.56
ABR-227ENST00000574266 ABCA3Q99758 1704 aa24.81■■□□□ 1.56
ABR-227ENST00000574266 STRN4Q9NRL3 753 aa24.81■■□□□ 1.56
ABR-227ENST00000574266 PPIP5K1Q6PFW1 1433 aa24.79■■□□□ 1.56
ABR-227ENST00000574266 CHRNA2Q15822 529 aa24.79■■□□□ 1.56
ABR-227ENST00000574266 ROCK2O75116 1388 aaKnown RBP24.79■■□□□ 1.56
ABR-227ENST00000574266 KIAA0232Q92628 1395 aa24.79■■□□□ 1.56
ABR-227ENST00000574266 SPATA31A5Q5VU36 1347 aa24.78■■□□□ 1.56
ABR-227ENST00000574266 SPATA31A7Q8IWB4 1347 aa24.78■■□□□ 1.56
ABR-227ENST00000574266 CABP1Q9NZU7 370 aa24.77■■□□□ 1.56
ABR-227ENST00000574266 BRD4O60885 1362 aaPredicted RBP24.77■■□□□ 1.56
ABR-227ENST00000574266 BAG6P46379 1132 aa24.76■■□□□ 1.55
ABR-227ENST00000574266 ZNF692Q9BU19 519 aaPredicted RBP24.73■■□□□ 1.55
ABR-227ENST00000574266 NLRP6P59044 892 aa24.72■■□□□ 1.55
ABR-227ENST00000574266 DEFB132Q7Z7B7 95 aa24.72■■□□□ 1.55
ABR-227ENST00000574266 USP35Q9P2H5 1018 aa24.72■■□□□ 1.55
ABR-227ENST00000574266 BRWD3Q6RI45 1802 aa24.72■■□□□ 1.55
ABR-227ENST00000574266 EP400Q96L91 3159 aa24.71■■□□□ 1.55
ABR-227ENST00000574266 SPATA31A1Q5TZJ5 1347 aa24.71■■□□□ 1.55
ABR-227ENST00000574266 ZBTB7CA1YPR0 619 aa24.71■■□□□ 1.55
ABR-227ENST00000574266 GCP02774 474 aa24.71■■□□□ 1.55
ABR-227ENST00000574266 PDE3BQ13370 1112 aa24.7■■□□□ 1.54
ABR-227ENST00000574266 NRAPQ86VF7 1730 aa24.69■■□□□ 1.54
ABR-227ENST00000574266 TOPAZ1Q8N9V7 1692 aa24.69■■□□□ 1.54
ABR-227ENST00000574266 QRICH2Q9H0J4 1663 aa24.68■■□□□ 1.54
ABR-227ENST00000574266 TONSLQ96HA7 1378 aa24.67■■□□□ 1.54
ABR-227ENST00000574266 FAM196AQ6ZSG2 479 aa24.66■■□□□ 1.54
ABR-227ENST00000574266 CARD11Q9BXL7 1154 aa24.66■■□□□ 1.54
ABR-227ENST00000574266 CPDO75976 1380 aa24.66■■□□□ 1.54
ABR-227ENST00000574266 TCP11L2Q8N4U5 519 aa24.65■■□□□ 1.54
ABR-227ENST00000574266 USP19O94966 1318 aa24.64■■□□□ 1.54
ABR-227ENST00000574266 BARGINQ6ZT62 677 aa24.64■■□□□ 1.54
ABR-227ENST00000574266 THRAP3Q9Y2W1 955 aaKnown RBP24.64■■□□□ 1.54
ABR-227ENST00000574266 PHRF1Q9P1Y6 1649 aaKnown RBP24.64■■□□□ 1.53
ABR-227ENST00000574266 CRYBG1Q9Y4K1 1723 aa24.64■■□□□ 1.53
ABR-227ENST00000574266 TRPM1Q7Z4N2 1603 aa24.63■■□□□ 1.53
ABR-227ENST00000574266 USP6P35125 1406 aa24.62■■□□□ 1.53
ABR-227ENST00000574266 FAM182BQ5T319 152 aa24.62■■□□□ 1.53
ABR-227ENST00000574266 LARP1Q6PKG0 1096 aaKnown RBP24.62■■□□□ 1.53
ABR-227ENST00000574266 KCNH5Q8NCM2 988 aa24.62■■□□□ 1.53
ABR-227ENST00000574266 SSH2Q76I76 1423 aa24.61■■□□□ 1.53
ABR-227ENST00000574266 TRIM26Q12899 539 aaPredicted RBP24.59■■□□□ 1.53
ABR-227ENST00000574266 C11orf95C9JLR9 678 aaPredicted RBP24.58■■□□□ 1.53
ABR-227ENST00000574266 EN1Q05925 392 aaPredicted RBP24.58■■□□□ 1.53
ABR-227ENST00000574266 TMC1Q8TDI8 760 aa24.58■■□□□ 1.53
ABR-227ENST00000574266 TTC21BQ7Z4L5 1316 aa24.58■■□□□ 1.52
ABR-227ENST00000574266 TTC21AQ8NDW8 1320 aa24.58■■□□□ 1.52
ABR-227ENST00000574266 TOM1L2Q6ZVM7 507 aa24.57■■□□□ 1.52
ABR-227ENST00000574266 SLC24A1O60721 1099 aa24.56■■□□□ 1.52
ABR-227ENST00000574266 TRIM37O94972 964 aa24.56■■□□□ 1.52
ABR-227ENST00000574266 KTN1Q86UP2 1357 aaKnown RBP24.55■■□□□ 1.52
ABR-227ENST00000574266 NRKQ7Z2Y5 1582 aa24.55■■□□□ 1.52
ABR-227ENST00000574266 HDGFL2Q7Z4V5 671 aaPredicted RBP24.55■■□□□ 1.52
ABR-227ENST00000574266 CAMTA1Q9Y6Y1 1673 aa24.54■■□□□ 1.52
ABR-227ENST00000574266 SOX12O15370 315 aa24.54■■□□□ 1.52
ABR-227ENST00000574266 APBA3O96018 575 aa24.54■■□□□ 1.52
ABR-227ENST00000574266 CSB-PGBD3P0DP91 1061 aa24.54■■□□□ 1.52
ABR-227ENST00000574266 AATKQ6ZMQ8 1374 aa24.54■■□□□ 1.52
ABR-227ENST00000574266 THSD7AQ9UPZ6 1657 aa24.52■■□□□ 1.52
ABR-227ENST00000574266 RGPD1P0DJD0 1748 aa24.51■■□□□ 1.51
ABR-227ENST00000574266 CRB1P82279 1406 aa24.51■■□□□ 1.51
ABR-227ENST00000574266 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.5■■□□□ 1.51
ABR-227ENST00000574266 TERF2IPQ9NYB0 399 aa24.5■■□□□ 1.51
ABR-227ENST00000574266 PSDA5PKW4 1024 aaPredicted RBP24.49■■□□□ 1.51
ABR-227ENST00000574266 DDB1Q16531 1140 aa24.49■■□□□ 1.51
ABR-227ENST00000574266 CDCA7Q9BWT1 371 aaPredicted RBP24.49■■□□□ 1.51
ABR-227ENST00000574266 SBNO2Q9Y2G9 1366 aa24.49■■□□□ 1.51
ABR-227ENST00000574266 COL5A2P05997 1499 aaPredicted RBP24.49■■□□□ 1.51
ABR-227ENST00000574266 EZH2Q15910 746 aaKnown RBP24.47■■□□□ 1.51
ABR-227ENST00000574266 NBPF14Q5TI25 921 aa24.47■■□□□ 1.51
ABR-227ENST00000574266 ARHGEF25Q86VW2 580 aa24.47■■□□□ 1.51
ABR-227ENST00000574266 SLIT3O75094 1523 aa24.45■■□□□ 1.51
ABR-227ENST00000574266 WDR17Q8IZU2 1322 aa24.45■■□□□ 1.5
ABR-227ENST00000574266 PUS7Q96PZ0 661 aaKnown RBP24.45■■□□□ 1.5
ABR-227ENST00000574266 LMO7Q8WWI1 1683 aa24.45■■□□□ 1.5
ABR-227ENST00000574266 CPSF1Q10570 1443 aaKnown RBP24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms