RNA–Protein interactions for RNA: ENST00000574175.1

TRAP1-209, Transcript of TNF receptor associated protein 1, humanhuman

TSL 5

Gene TRAP1, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-209ENST00000574175 POLR3AO14802 1390 aaPredicted RBP23.47■■□□□ 1.35
TRAP1-209ENST00000574175 BCL9LQ86UU0 1499 aa23.47■■□□□ 1.35
TRAP1-209ENST00000574175 PLEKHG3A1L390 1219 aa23.46■■□□□ 1.35
TRAP1-209ENST00000574175 PCGF6Q9BYE7 350 aa23.46■■□□□ 1.35
TRAP1-209ENST00000574175 EVC2Q86UK5 1308 aa23.45■■□□□ 1.34
TRAP1-209ENST00000574175 SLIT2O94813 1529 aa23.44■■□□□ 1.34
TRAP1-209ENST00000574175 UNC5CLQ8IV45 518 aa23.43■■□□□ 1.34
TRAP1-209ENST00000574175 NUTM2GQ5VZR2 741 aa23.42■■□□□ 1.34
TRAP1-209ENST00000574175 CABP1Q9NZU7 370 aa23.4■■□□□ 1.34
TRAP1-209ENST00000574175 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.39■■□□□ 1.34
TRAP1-209ENST00000574175 PLCH1Q4KWH8 1693 aa23.39■■□□□ 1.34
TRAP1-209ENST00000574175 FAM83GA6ND36 823 aa23.38■■□□□ 1.33
TRAP1-209ENST00000574175 CRYBG1Q9Y4K1 1723 aa23.37■■□□□ 1.33
TRAP1-209ENST00000574175 GJD4Q96KN9 370 aaPredicted RBP23.37■■□□□ 1.33
TRAP1-209ENST00000574175 CCDC9Q9Y3X0 531 aaKnown RBP23.36■■□□□ 1.33
TRAP1-209ENST00000574175 ABTB2Q8N961 1025 aa23.35■■□□□ 1.33
TRAP1-209ENST00000574175 NWD2Q9ULI1 1742 aa23.35■■□□□ 1.33
TRAP1-209ENST00000574175 SBNO2Q9Y2G9 1366 aa23.35■■□□□ 1.33
TRAP1-209ENST00000574175 UPF1Q92900 1129 aaKnown RBP eCLIP23.34■■□□□ 1.33
TRAP1-209ENST00000574175 PRDM11Q9NQV5 511 aa23.34■■□□□ 1.33
TRAP1-209ENST00000574175 USP6P35125 1406 aa23.33■■□□□ 1.33
TRAP1-209ENST00000574175 PHRF1Q9P1Y6 1649 aaKnown RBP23.33■■□□□ 1.33
TRAP1-209ENST00000574175 GLI3P10071 1580 aa23.33■■□□□ 1.33
TRAP1-209ENST00000574175 ATAD2Q6PL18 1390 aa23.33■■□□□ 1.33
TRAP1-209ENST00000574175 BTG4Q9NY30 223 aa23.33■■□□□ 1.33
TRAP1-209ENST00000574175 COL14A1Q05707 1796 aaKnown RBP23.32■■□□□ 1.32
TRAP1-209ENST00000574175 KIAA0232Q92628 1395 aa23.32■■□□□ 1.32
TRAP1-209ENST00000574175 VPS72Q15906 364 aa23.32■■□□□ 1.32
TRAP1-209ENST00000574175 ZC3H6P61129 1189 aaKnown RBP23.31■■□□□ 1.32
TRAP1-209ENST00000574175 CHRNA2Q15822 529 aa23.3■■□□□ 1.32
TRAP1-209ENST00000574175 BRD4O60885 1362 aaPredicted RBP23.29■■□□□ 1.32
TRAP1-209ENST00000574175 EP400Q96L91 3159 aa23.29■■□□□ 1.32
TRAP1-209ENST00000574175 NRAPQ86VF7 1730 aa23.29■■□□□ 1.32
TRAP1-209ENST00000574175 NRKQ7Z2Y5 1582 aa23.28■■□□□ 1.32
TRAP1-209ENST00000574175 USP19O94966 1318 aa23.28■■□□□ 1.32
TRAP1-209ENST00000574175 CLSPNQ9HAW4 1339 aa23.28■■□□□ 1.32
TRAP1-209ENST00000574175 NLRP13Q86W25 1043 aa23.27■■□□□ 1.32
TRAP1-209ENST00000574175 ST20-MTHFSA0A0A6YYL1 179 aa23.25■■□□□ 1.31
TRAP1-209ENST00000574175 NLRP6P59044 892 aa23.25■■□□□ 1.31
TRAP1-209ENST00000574175 TMC1Q8TDI8 760 aa23.25■■□□□ 1.31
TRAP1-209ENST00000574175 SSH2Q76I76 1423 aa23.25■■□□□ 1.31
TRAP1-209ENST00000574175 CCER1Q8TC90 406 aaPredicted RBP23.24■■□□□ 1.31
TRAP1-209ENST00000574175 ZNF692Q9BU19 519 aaPredicted RBP23.24■■□□□ 1.31
TRAP1-209ENST00000574175 TTC21BQ7Z4L5 1316 aa23.24■■□□□ 1.31
TRAP1-209ENST00000574175 KTN1Q86UP2 1357 aaKnown RBP23.24■■□□□ 1.31
TRAP1-209ENST00000574175 AKAP12Q02952 1782 aa23.23■■□□□ 1.31
TRAP1-209ENST00000574175 A0A0G2JS52 829 aa23.23■■□□□ 1.31
TRAP1-209ENST00000574175 MYT1Q01538 1121 aa23.23■■□□□ 1.31
TRAP1-209ENST00000574175 SEPT12Q8IYM1 358 aa23.23■■□□□ 1.31
TRAP1-209ENST00000574175 USP47Q96K76 1375 aa23.23■■□□□ 1.31
TRAP1-209ENST00000574175 PIK3C2AO00443 1686 aa23.22■■□□□ 1.31
TRAP1-209ENST00000574175 ZBTB7CA1YPR0 619 aa23.22■■□□□ 1.31
TRAP1-209ENST00000574175 GCP02774 474 aa23.22■■□□□ 1.31
TRAP1-209ENST00000574175 TESK2Q96S53 571 aa23.22■■□□□ 1.31
TRAP1-209ENST00000574175 STRN4Q9NRL3 753 aa23.22■■□□□ 1.31
TRAP1-209ENST00000574175 CPSF1Q10570 1443 aaKnown RBP23.22■■□□□ 1.31
TRAP1-209ENST00000574175 FAM98CQ17RN3 349 aaKnown RBP23.21■■□□□ 1.31
TRAP1-209ENST00000574175 CPDO75976 1380 aa23.2■■□□□ 1.3
TRAP1-209ENST00000574175 SPATA31A5Q5VU36 1347 aa23.19■■□□□ 1.3
TRAP1-209ENST00000574175 SPATA31A7Q8IWB4 1347 aa23.19■■□□□ 1.3
TRAP1-209ENST00000574175 TIMELESSQ9UNS1 1208 aa23.19■■□□□ 1.3
TRAP1-209ENST00000574175 TTC21AQ8NDW8 1320 aa23.18■■□□□ 1.3
TRAP1-209ENST00000574175 SLC12A5Q9H2X9 1139 aa23.18■■□□□ 1.3
TRAP1-209ENST00000574175 SLIT3O75094 1523 aa23.18■■□□□ 1.3
TRAP1-209ENST00000574175 MON2Q7Z3U7 1717 aa23.17■■□□□ 1.3
TRAP1-209ENST00000574175 HDGFL2Q7Z4V5 671 aaPredicted RBP23.17■■□□□ 1.3
TRAP1-209ENST00000574175 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.17■■□□□ 1.3
TRAP1-209ENST00000574175 CD163L1Q9NR16 1453 aa23.17■■□□□ 1.3
TRAP1-209ENST00000574175 SOX12O15370 315 aa23.16■■□□□ 1.3
TRAP1-209ENST00000574175 EVA1CP58658 441 aa23.16■■□□□ 1.3
TRAP1-209ENST00000574175 BRWD3Q6RI45 1802 aa23.16■■□□□ 1.3
TRAP1-209ENST00000574175 ONECUT3O60422 494 aaPredicted RBP23.15■■□□□ 1.3
TRAP1-209ENST00000574175 CAMTA1Q9Y6Y1 1673 aa23.15■■□□□ 1.3
TRAP1-209ENST00000574175 LMO7Q8WWI1 1683 aa23.14■■□□□ 1.29
TRAP1-209ENST00000574175 PUS7Q96PZ0 661 aaKnown RBP23.14■■□□□ 1.29
TRAP1-209ENST00000574175 A0A1W2PP64 1363 aa23.14■■□□□ 1.29
TRAP1-209ENST00000574175 SPATA31A1Q5TZJ5 1347 aa23.13■■□□□ 1.29
TRAP1-209ENST00000574175 TERF2IPQ9NYB0 399 aa23.13■■□□□ 1.29
TRAP1-209ENST00000574175 SLC24A1O60721 1099 aa23.12■■□□□ 1.29
TRAP1-209ENST00000574175 KRT27Q7Z3Y8 459 aa23.12■■□□□ 1.29
TRAP1-209ENST00000574175 USP35Q9P2H5 1018 aa23.12■■□□□ 1.29
TRAP1-209ENST00000574175 ZRANB1Q9UGI0 708 aa23.12■■□□□ 1.29
TRAP1-209ENST00000574175 TMF1P82094 1093 aa23.11■■□□□ 1.29
TRAP1-209ENST00000574175 LARP1Q6PKG0 1096 aaKnown RBP23.11■■□□□ 1.29
TRAP1-209ENST00000574175 NME9Q86XW9 330 aa23.11■■□□□ 1.29
TRAP1-209ENST00000574175 EDC4Q6P2E9 1401 aaKnown RBP23.1■■□□□ 1.29
TRAP1-209ENST00000574175 AATKQ6ZMQ8 1374 aa23.1■■□□□ 1.29
TRAP1-209ENST00000574175 NINLQ9Y2I6 1382 aa23.1■■□□□ 1.29
TRAP1-209ENST00000574175 KCNH5Q8NCM2 988 aa23.09■■□□□ 1.29
TRAP1-209ENST00000574175 COL5A2P05997 1499 aaPredicted RBP23.09■■□□□ 1.29
TRAP1-209ENST00000574175 THSD7AQ9UPZ6 1657 aa23.08■■□□□ 1.29
TRAP1-209ENST00000574175 NFAT5O94916 1531 aa23.07■■□□□ 1.28
TRAP1-209ENST00000574175 USP31Q70CQ4 1352 aa23.06■■□□□ 1.28
TRAP1-209ENST00000574175 ARHGEF25Q86VW2 580 aa23.05■■□□□ 1.28
TRAP1-209ENST00000574175 TCP11L2Q8N4U5 519 aa23.04■■□□□ 1.28
TRAP1-209ENST00000574175 BLMP54132 1417 aaPredicted RBP23.04■■□□□ 1.28
TRAP1-209ENST00000574175 FAM182BQ5T319 152 aa23.03■■□□□ 1.28
TRAP1-209ENST00000574175 CCDC125Q86Z20 511 aa23.03■■□□□ 1.28
TRAP1-209ENST00000574175 COL18A1P39060 1754 aa23.02■■□□□ 1.28
TRAP1-209ENST00000574175 CRB1P82279 1406 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms