RNA–Protein interactions for RNA: ENST00000573559.3

ABR-221, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-221ENST00000573559 TMC1Q8TDI8 760 aa29.67■■■□□ 2.34
ABR-221ENST00000573559 CABLES1Q8TDN4 633 aa29.67■■■□□ 2.34
ABR-221ENST00000573559 USP6P35125 1406 aa29.66■■■□□ 2.34
ABR-221ENST00000573559 AFF2P51816 1311 aa29.64■■■□□ 2.34
ABR-221ENST00000573559 EIF4G2P78344 907 aaKnown RBP eCLIP29.63■■■□□ 2.33
ABR-221ENST00000573559 NGLY1Q96IV0 654 aa29.63■■■□□ 2.33
ABR-221ENST00000573559 PUS7Q96PZ0 661 aaKnown RBP29.62■■■□□ 2.33
ABR-221ENST00000573559 NUTM2GQ5VZR2 741 aa29.61■■■□□ 2.33
ABR-221ENST00000573559 CRYBG1Q9Y4K1 1723 aa29.61■■■□□ 2.33
ABR-221ENST00000573559 BRD4O60885 1362 aaPredicted RBP29.61■■■□□ 2.33
ABR-221ENST00000573559 MON2Q7Z3U7 1717 aa29.6■■■□□ 2.33
ABR-221ENST00000573559 ZNF772Q68DY9 489 aaPredicted RBP29.6■■■□□ 2.33
ABR-221ENST00000573559 ILDR2Q71H61 639 aa29.6■■■□□ 2.33
ABR-221ENST00000573559 HSPA5P11021 654 aaKnown RBP29.59■■■□□ 2.33
ABR-221ENST00000573559 ABTB2Q8N961 1025 aa29.59■■■□□ 2.33
ABR-221ENST00000573559 ZNF692Q9BU19 519 aaPredicted RBP29.59■■■□□ 2.33
ABR-221ENST00000573559 SLC12A5Q9H2X9 1139 aa29.59■■■□□ 2.33
ABR-221ENST00000573559 KTN1Q86UP2 1357 aaKnown RBP29.59■■■□□ 2.33
ABR-221ENST00000573559 CPSF1Q10570 1443 aaKnown RBP29.59■■■□□ 2.33
ABR-221ENST00000573559 NRKQ7Z2Y5 1582 aa29.58■■■□□ 2.33
ABR-221ENST00000573559 PHRF1Q9P1Y6 1649 aaKnown RBP29.58■■■□□ 2.33
ABR-221ENST00000573559 POTEAQ6S8J7 498 aa29.57■■■□□ 2.32
ABR-221ENST00000573559 CD163L1Q9NR16 1453 aa29.56■■■□□ 2.32
ABR-221ENST00000573559 CDCA8Q53HL2 280 aa29.56■■■□□ 2.32
ABR-221ENST00000573559 HDGFL2Q7Z4V5 671 aaPredicted RBP29.56■■■□□ 2.32
ABR-221ENST00000573559 NINLQ9Y2I6 1382 aa29.55■■■□□ 2.32
ABR-221ENST00000573559 SSH2Q76I76 1423 aa29.54■■■□□ 2.32
ABR-221ENST00000573559 PIK3C2AO00443 1686 aa29.54■■■□□ 2.32
ABR-221ENST00000573559 TERF2IPQ9NYB0 399 aa29.53■■■□□ 2.32
ABR-221ENST00000573559 TTC21BQ7Z4L5 1316 aa29.52■■■□□ 2.32
ABR-221ENST00000573559 A0A1W2PP64 1363 aa29.52■■■□□ 2.32
ABR-221ENST00000573559 PLCH1Q4KWH8 1693 aa29.51■■■□□ 2.31
ABR-221ENST00000573559 USP21Q9UK80 565 aa29.51■■■□□ 2.31
ABR-221ENST00000573559 NLRP13Q86W25 1043 aa29.5■■■□□ 2.31
ABR-221ENST00000573559 NLRP6P59044 892 aa29.49■■■□□ 2.31
ABR-221ENST00000573559 FNBP4Q8N3X1 1017 aaPredicted RBP29.49■■■□□ 2.31
ABR-221ENST00000573559 TTC21AQ8NDW8 1320 aa29.48■■■□□ 2.31
ABR-221ENST00000573559 MYOM1P52179 1685 aa29.48■■■□□ 2.31
ABR-221ENST00000573559 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.48■■■□□ 2.31
ABR-221ENST00000573559 POLR3GLQ9BT43 218 aa29.48■■■□□ 2.31
ABR-221ENST00000573559 USP19O94966 1318 aa29.47■■■□□ 2.31
ABR-221ENST00000573559 EDC4Q6P2E9 1401 aaKnown RBP29.46■■■□□ 2.31
ABR-221ENST00000573559 COL14A1Q05707 1796 aaKnown RBP29.46■■■□□ 2.31
ABR-221ENST00000573559 SLIT2O94813 1529 aa29.45■■■□□ 2.31
ABR-221ENST00000573559 ANKRD36BQ8N2N9 1353 aa29.45■■■□□ 2.31
ABR-221ENST00000573559 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.45■■■□□ 2.3
ABR-221ENST00000573559 NWD2Q9ULI1 1742 aa29.45■■■□□ 2.3
ABR-221ENST00000573559 ZC3H6P61129 1189 aaKnown RBP29.44■■■□□ 2.3
ABR-221ENST00000573559 QTRT2Q9H974 415 aaKnown RBP29.44■■■□□ 2.3
ABR-221ENST00000573559 PRDM11Q9NQV5 511 aa29.44■■■□□ 2.3
ABR-221ENST00000573559 BCL9LQ86UU0 1499 aa29.43■■■□□ 2.3
ABR-221ENST00000573559 KIAA0232Q92628 1395 aa29.43■■■□□ 2.3
ABR-221ENST00000573559 FAM83GA6ND36 823 aa29.43■■■□□ 2.3
ABR-221ENST00000573559 SLIT3O75094 1523 aa29.42■■■□□ 2.3
ABR-221ENST00000573559 TRPC5Q9UL62 973 aaPredicted RBP29.41■■■□□ 2.3
ABR-221ENST00000573559 GCP02774 474 aa29.4■■■□□ 2.3
ABR-221ENST00000573559 RXRBP28702 533 aa29.4■■■□□ 2.3
ABR-221ENST00000573559 ATRNO75882 1429 aa29.39■■■□□ 2.3
ABR-221ENST00000573559 NME9Q86XW9 330 aa29.39■■■□□ 2.3
ABR-221ENST00000573559 UNC5CLQ8IV45 518 aa29.39■■■□□ 2.3
ABR-221ENST00000573559 CHRNA2Q15822 529 aa29.38■■■□□ 2.29
ABR-221ENST00000573559 NRAPQ86VF7 1730 aa29.37■■■□□ 2.29
ABR-221ENST00000573559 ZRANB1Q9UGI0 708 aa29.37■■■□□ 2.29
ABR-221ENST00000573559 USP54Q70EL1 1684 aa29.37■■■□□ 2.29
ABR-221ENST00000573559 ZBTB7CA1YPR0 619 aa29.36■■■□□ 2.29
ABR-221ENST00000573559 SOX12O15370 315 aa29.36■■■□□ 2.29
ABR-221ENST00000573559 BTG4Q9NY30 223 aa29.36■■■□□ 2.29
ABR-221ENST00000573559 RBM6P78332 1123 aaKnown RBP29.35■■■□□ 2.29
ABR-221ENST00000573559 CPDO75976 1380 aa29.34■■■□□ 2.29
ABR-221ENST00000573559 USP31Q70CQ4 1352 aa29.34■■■□□ 2.29
ABR-221ENST00000573559 KCNH5Q8NCM2 988 aa29.32■■■□□ 2.28
ABR-221ENST00000573559 CCDC9Q9Y3X0 531 aaKnown RBP29.32■■■□□ 2.28
ABR-221ENST00000573559 KIF20BQ96Q89 1820 aa29.3■■■□□ 2.28
ABR-221ENST00000573559 C11orf95C9JLR9 678 aaPredicted RBP29.3■■■□□ 2.28
ABR-221ENST00000573559 OVOS2A0A0J9YW53 1432 aa29.29■■■□□ 2.28
ABR-221ENST00000573559 OVOS2Q6IE36 1432 aa29.29■■■□□ 2.28
ABR-221ENST00000573559 LMO7Q8WWI1 1683 aa29.29■■■□□ 2.28
ABR-221ENST00000573559 NFAT5O94916 1531 aa29.29■■■□□ 2.28
ABR-221ENST00000573559 CDK12Q9NYV4 1490 aaPredicted RBP29.29■■■□□ 2.28
ABR-221ENST00000573559 NSD3Q9BZ95 1437 aa29.28■■■□□ 2.28
ABR-221ENST00000573559 VPS72Q15906 364 aa29.28■■■□□ 2.28
ABR-221ENST00000573559 GJD4Q96KN9 370 aaPredicted RBP29.28■■■□□ 2.28
ABR-221ENST00000573559 GLI3P10071 1580 aa29.27■■■□□ 2.28
ABR-221ENST00000573559 RGS12O14924 1447 aa29.27■■■□□ 2.28
ABR-221ENST00000573559 STRN4Q9NRL3 753 aa29.26■■■□□ 2.27
ABR-221ENST00000573559 CAMTA1Q9Y6Y1 1673 aa29.25■■■□□ 2.27
ABR-221ENST00000573559 COG3Q96JB2 828 aa29.25■■■□□ 2.27
ABR-221ENST00000573559 KIF7Q2M1P5 1343 aa29.24■■■□□ 2.27
ABR-221ENST00000573559 CARD14Q9BXL6 1004 aa29.24■■■□□ 2.27
ABR-221ENST00000573559 LTN1O94822 1766 aa29.23■■■□□ 2.27
ABR-221ENST00000573559 SOCS7O14512 581 aa29.22■■■□□ 2.27
ABR-221ENST00000573559 EVA1CP58658 441 aa29.22■■■□□ 2.27
ABR-221ENST00000573559 GGNBP2Q9H3C7 697 aa29.22■■■□□ 2.27
ABR-221ENST00000573559 AATKQ6ZMQ8 1374 aa29.22■■■□□ 2.27
ABR-221ENST00000573559 COL18A1P39060 1754 aa29.21■■■□□ 2.27
ABR-221ENST00000573559 ARHGEF25Q86VW2 580 aa29.21■■■□□ 2.27
ABR-221ENST00000573559 FYB1O15117 783 aa29.2■■■□□ 2.26
ABR-221ENST00000573559 RGPD5Q99666 1765 aa29.19■■■□□ 2.26
ABR-221ENST00000573559 COL5A2P05997 1499 aaPredicted RBP29.18■■■□□ 2.26
ABR-221ENST00000573559 PANK3Q9H999 370 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms