RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 ACEP12821 1306 aa18.16■□□□□ 0.5
NPLOC4-213ENST00000573519 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.15■□□□□ 0.5
NPLOC4-213ENST00000573519 PPIP5K1Q6PFW1 1433 aa18.15■□□□□ 0.5
NPLOC4-213ENST00000573519 NBPF8Q3BBV2 869 aa18.14■□□□□ 0.49
NPLOC4-213ENST00000573519 CCDC9Q9Y3X0 531 aaKnown RBP18.14■□□□□ 0.49
NPLOC4-213ENST00000573519 PLCH1Q4KWH8 1693 aa18.14■□□□□ 0.49
NPLOC4-213ENST00000573519 FAM83GA6ND36 823 aa18.13■□□□□ 0.49
NPLOC4-213ENST00000573519 NUTM2GQ5VZR2 741 aa18.13■□□□□ 0.49
NPLOC4-213ENST00000573519 POLR3AO14802 1390 aaPredicted RBP18.13■□□□□ 0.49
NPLOC4-213ENST00000573519 PLEKHG3A1L390 1219 aa18.12■□□□□ 0.49
NPLOC4-213ENST00000573519 RALGAPBQ86X10 1494 aa18.12■□□□□ 0.49
NPLOC4-213ENST00000573519 EVC2Q86UK5 1308 aa18.11■□□□□ 0.49
NPLOC4-213ENST00000573519 ATAD2Q6PL18 1390 aa18.11■□□□□ 0.49
NPLOC4-213ENST00000573519 BTG4Q9NY30 223 aa18.1■□□□□ 0.49
NPLOC4-213ENST00000573519 NWD2Q9ULI1 1742 aa18.09■□□□□ 0.49
NPLOC4-213ENST00000573519 GLI3P10071 1580 aa18.09■□□□□ 0.49
NPLOC4-213ENST00000573519 VPS72Q15906 364 aa18.09■□□□□ 0.49
NPLOC4-213ENST00000573519 CARD11Q9BXL7 1154 aa18.09■□□□□ 0.49
NPLOC4-213ENST00000573519 ABTB2Q8N961 1025 aa18.08■□□□□ 0.48
NPLOC4-213ENST00000573519 PCGF6Q9BYE7 350 aa18.08■□□□□ 0.48
NPLOC4-213ENST00000573519 PRDM11Q9NQV5 511 aa18.08■□□□□ 0.48
NPLOC4-213ENST00000573519 CABP1Q9NZU7 370 aa18.08■□□□□ 0.48
NPLOC4-213ENST00000573519 COL14A1Q05707 1796 aaKnown RBP18.07■□□□□ 0.48
NPLOC4-213ENST00000573519 CRYBG1Q9Y4K1 1723 aa18.07■□□□□ 0.48
NPLOC4-213ENST00000573519 PHRF1Q9P1Y6 1649 aaKnown RBP18.05■□□□□ 0.48
NPLOC4-213ENST00000573519 A0A0G2JS52 829 aa18.05■□□□□ 0.48
NPLOC4-213ENST00000573519 ZC3H6P61129 1189 aaKnown RBP18.05■□□□□ 0.48
NPLOC4-213ENST00000573519 MYT1Q01538 1121 aa18.05■□□□□ 0.48
NPLOC4-213ENST00000573519 KIAA0232Q92628 1395 aa18.04■□□□□ 0.48
NPLOC4-213ENST00000573519 CHRNA2Q15822 529 aa18.04■□□□□ 0.48
NPLOC4-213ENST00000573519 NRAPQ86VF7 1730 aa18.03■□□□□ 0.48
NPLOC4-213ENST00000573519 SEPT12Q8IYM1 358 aa18.03■□□□□ 0.48
NPLOC4-213ENST00000573519 USP6P35125 1406 aa18.02■□□□□ 0.48
NPLOC4-213ENST00000573519 NLRP13Q86W25 1043 aa18.02■□□□□ 0.48
NPLOC4-213ENST00000573519 FAM98CQ17RN3 349 aaKnown RBP18.01■□□□□ 0.47
NPLOC4-213ENST00000573519 STRN4Q9NRL3 753 aa18.01■□□□□ 0.47
NPLOC4-213ENST00000573519 NRKQ7Z2Y5 1582 aa18■□□□□ 0.47
NPLOC4-213ENST00000573519 BRD4O60885 1362 aaPredicted RBP18■□□□□ 0.47
NPLOC4-213ENST00000573519 ZBTB7CA1YPR0 619 aa17.99■□□□□ 0.47
NPLOC4-213ENST00000573519 NLRP6P59044 892 aa17.99■□□□□ 0.47
NPLOC4-213ENST00000573519 USP19O94966 1318 aa17.98■□□□□ 0.47
NPLOC4-213ENST00000573519 SBNO2Q9Y2G9 1366 aa17.97■□□□□ 0.47
NPLOC4-213ENST00000573519 ONECUT3O60422 494 aaPredicted RBP17.97■□□□□ 0.47
NPLOC4-213ENST00000573519 GCP02774 474 aa17.97■□□□□ 0.47
NPLOC4-213ENST00000573519 EVA1CP58658 441 aa17.97■□□□□ 0.47
NPLOC4-213ENST00000573519 KRT27Q7Z3Y8 459 aa17.97■□□□□ 0.47
NPLOC4-213ENST00000573519 BRWD3Q6RI45 1802 aa17.97■□□□□ 0.47
NPLOC4-213ENST00000573519 SPATA31A5Q5VU36 1347 aa17.97■□□□□ 0.47
NPLOC4-213ENST00000573519 SPATA31A7Q8IWB4 1347 aa17.97■□□□□ 0.47
NPLOC4-213ENST00000573519 ZNF692Q9BU19 519 aaPredicted RBP17.96■□□□□ 0.47
NPLOC4-213ENST00000573519 TMC1Q8TDI8 760 aa17.95■□□□□ 0.46
NPLOC4-213ENST00000573519 USP35Q9P2H5 1018 aa17.95■□□□□ 0.46
NPLOC4-213ENST00000573519 KTN1Q86UP2 1357 aaKnown RBP17.94■□□□□ 0.46
NPLOC4-213ENST00000573519 CCDC125Q86Z20 511 aa17.94■□□□□ 0.46
NPLOC4-213ENST00000573519 SSH2Q76I76 1423 aa17.94■□□□□ 0.46
NPLOC4-213ENST00000573519 TTC21BQ7Z4L5 1316 aa17.94■□□□□ 0.46
NPLOC4-213ENST00000573519 PIK3C2AO00443 1686 aa17.93■□□□□ 0.46
NPLOC4-213ENST00000573519 CPDO75976 1380 aa17.93■□□□□ 0.46
NPLOC4-213ENST00000573519 AKAP12Q02952 1782 aa17.93■□□□□ 0.46
NPLOC4-213ENST00000573519 SPATA31A1Q5TZJ5 1347 aa17.93■□□□□ 0.46
NPLOC4-213ENST00000573519 SOX12O15370 315 aa17.92■□□□□ 0.46
NPLOC4-213ENST00000573519 CAMTA1Q9Y6Y1 1673 aa17.92■□□□□ 0.46
NPLOC4-213ENST00000573519 BLMP54132 1417 aaPredicted RBP17.91■□□□□ 0.46
NPLOC4-213ENST00000573519 CPSF1Q10570 1443 aaKnown RBP17.91■□□□□ 0.46
NPLOC4-213ENST00000573519 ST20-MTHFSA0A0A6YYL1 179 aa17.91■□□□□ 0.46
NPLOC4-213ENST00000573519 SF3B2Q13435 895 aaKnown RBP17.91■□□□□ 0.46
NPLOC4-213ENST00000573519 LARP1Q6PKG0 1096 aaKnown RBP17.91■□□□□ 0.46
NPLOC4-213ENST00000573519 SLIT3O75094 1523 aa17.91■□□□□ 0.46
NPLOC4-213ENST00000573519 TTC21AQ8NDW8 1320 aa17.91■□□□□ 0.46
NPLOC4-213ENST00000573519 LMO7Q8WWI1 1683 aa17.9■□□□□ 0.46
NPLOC4-213ENST00000573519 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.9■□□□□ 0.46
NPLOC4-213ENST00000573519 FAM182BQ5T319 152 aa17.89■□□□□ 0.45
NPLOC4-213ENST00000573519 HDGFL2Q7Z4V5 671 aaPredicted RBP17.89■□□□□ 0.45
NPLOC4-213ENST00000573519 EP400Q96L91 3159 aa17.89■□□□□ 0.45
NPLOC4-213ENST00000573519 THSD7AQ9UPZ6 1657 aa17.88■□□□□ 0.45
NPLOC4-213ENST00000573519 SLC12A5Q9H2X9 1139 aa17.88■□□□□ 0.45
NPLOC4-213ENST00000573519 COL5A2P05997 1499 aaPredicted RBP17.88■□□□□ 0.45
NPLOC4-213ENST00000573519 MON2Q7Z3U7 1717 aa17.87■□□□□ 0.45
NPLOC4-213ENST00000573519 KCNH5Q8NCM2 988 aa17.87■□□□□ 0.45
NPLOC4-213ENST00000573519 TESK2Q96S53 571 aa17.86■□□□□ 0.45
NPLOC4-213ENST00000573519 TERF2IPQ9NYB0 399 aa17.86■□□□□ 0.45
NPLOC4-213ENST00000573519 CD163L1Q9NR16 1453 aa17.86■□□□□ 0.45
NPLOC4-213ENST00000573519 AATKQ6ZMQ8 1374 aa17.85■□□□□ 0.45
NPLOC4-213ENST00000573519 DEFB132Q7Z7B7 95 aa17.85■□□□□ 0.45
NPLOC4-213ENST00000573519 TCP11L2Q8N4U5 519 aa17.85■□□□□ 0.45
NPLOC4-213ENST00000573519 USP47Q96K76 1375 aa17.85■□□□□ 0.45
NPLOC4-213ENST00000573519 ZRANB1Q9UGI0 708 aa17.85■□□□□ 0.45
NPLOC4-213ENST00000573519 SLC24A1O60721 1099 aa17.84■□□□□ 0.45
NPLOC4-213ENST00000573519 BARGINQ6ZT62 677 aa17.84■□□□□ 0.45
NPLOC4-213ENST00000573519 NME9Q86XW9 330 aa17.84■□□□□ 0.45
NPLOC4-213ENST00000573519 CRB1P82279 1406 aa17.83■□□□□ 0.45
NPLOC4-213ENST00000573519 A0A1W2PP64 1363 aa17.83■□□□□ 0.45
NPLOC4-213ENST00000573519 CLSPNQ9HAW4 1339 aa17.83■□□□□ 0.44
NPLOC4-213ENST00000573519 TOM1L2Q6ZVM7 507 aa17.83■□□□□ 0.44
NPLOC4-213ENST00000573519 CCER1Q8TC90 406 aaPredicted RBP17.83■□□□□ 0.44
NPLOC4-213ENST00000573519 PUS7Q96PZ0 661 aaKnown RBP17.83■□□□□ 0.44
NPLOC4-213ENST00000573519 PDE3BQ13370 1112 aa17.82■□□□□ 0.44
NPLOC4-213ENST00000573519 ARHGEF25Q86VW2 580 aa17.82■□□□□ 0.44
NPLOC4-213ENST00000573519 TIMELESSQ9UNS1 1208 aa17.82■□□□□ 0.44
NPLOC4-213ENST00000573519 AXIN2Q9Y2T1 843 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms