RNA–Protein interactions for RNA: ENST00000573095.1

HCFC1R1-204, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3

Gene HCFC1R1, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-204ENST00000573095 CCDC125Q86Z20 511 aa28.02■■■□□ 2.08
HCFC1R1-204ENST00000573095 QRICH2Q9H0J4 1663 aa28.01■■■□□ 2.07
HCFC1R1-204ENST00000573095 NBPF1Q3BBV0 1214 aa28.01■■■□□ 2.07
HCFC1R1-204ENST00000573095 CDK19Q9BWU1 502 aa28.01■■■□□ 2.07
HCFC1R1-204ENST00000573095 ONECUT3O60422 494 aaPredicted RBP27.98■■■□□ 2.07
HCFC1R1-204ENST00000573095 PAK3O75914 559 aaPredicted RBP27.98■■■□□ 2.07
HCFC1R1-204ENST00000573095 SEPT12Q8IYM1 358 aa27.98■■■□□ 2.07
HCFC1R1-204ENST00000573095 TRPM1Q7Z4N2 1603 aa27.97■■■□□ 2.07
HCFC1R1-204ENST00000573095 CCDC9Q9Y3X0 531 aaKnown RBP27.97■■■□□ 2.07
HCFC1R1-204ENST00000573095 BLMP54132 1417 aaPredicted RBP27.97■■■□□ 2.07
HCFC1R1-204ENST00000573095 BTG4Q9NY30 223 aa27.96■■■□□ 2.07
HCFC1R1-204ENST00000573095 CCDC61Q9Y6R9 512 aa27.96■■■□□ 2.07
HCFC1R1-204ENST00000573095 CENPJQ9HC77 1338 aaPredicted RBP27.94■■■□□ 2.06
HCFC1R1-204ENST00000573095 ACEP12821 1306 aa27.93■■■□□ 2.06
HCFC1R1-204ENST00000573095 PLEKHG3A1L390 1219 aa27.93■■■□□ 2.06
HCFC1R1-204ENST00000573095 NRKQ7Z2Y5 1582 aa27.93■■■□□ 2.06
HCFC1R1-204ENST00000573095 THSD7AQ9UPZ6 1657 aa27.91■■■□□ 2.06
HCFC1R1-204ENST00000573095 L3MBTL2Q969R5 705 aa27.91■■■□□ 2.06
HCFC1R1-204ENST00000573095 PRDM11Q9NQV5 511 aa27.91■■■□□ 2.06
HCFC1R1-204ENST00000573095 PPIP5K1Q6PFW1 1433 aa27.9■■■□□ 2.06
HCFC1R1-204ENST00000573095 KIAA0232Q92628 1395 aa27.89■■■□□ 2.06
HCFC1R1-204ENST00000573095 NBPF8Q3BBV2 869 aa27.89■■■□□ 2.06
HCFC1R1-204ENST00000573095 KRT27Q7Z3Y8 459 aa27.88■■■□□ 2.05
HCFC1R1-204ENST00000573095 SPATA31A5Q5VU36 1347 aa27.87■■■□□ 2.05
HCFC1R1-204ENST00000573095 SPATA31A7Q8IWB4 1347 aa27.87■■■□□ 2.05
HCFC1R1-204ENST00000573095 SRPK2P78362 688 aaKnown RBP27.86■■■□□ 2.05
HCFC1R1-204ENST00000573095 FAM98CQ17RN3 349 aaKnown RBP27.86■■■□□ 2.05
HCFC1R1-204ENST00000573095 A0A0G2JS52 829 aa27.84■■■□□ 2.05
HCFC1R1-204ENST00000573095 MYT1Q01538 1121 aa27.84■■■□□ 2.05
HCFC1R1-204ENST00000573095 SIN3AQ96ST3 1273 aa27.84■■■□□ 2.05
HCFC1R1-204ENST00000573095 ZRANB1Q9UGI0 708 aa27.84■■■□□ 2.05
HCFC1R1-204ENST00000573095 LMO7Q8WWI1 1683 aa27.84■■■□□ 2.05
HCFC1R1-204ENST00000573095 BRD4O60885 1362 aaPredicted RBP27.84■■■□□ 2.05
HCFC1R1-204ENST00000573095 USP19O94966 1318 aa27.83■■■□□ 2.05
HCFC1R1-204ENST00000573095 NUTM2GQ5VZR2 741 aa27.82■■■□□ 2.04
HCFC1R1-204ENST00000573095 CABP2Q9NPB3 220 aa27.82■■■□□ 2.04
HCFC1R1-204ENST00000573095 RGPD1P0DJD0 1748 aa27.81■■■□□ 2.04
HCFC1R1-204ENST00000573095 SF3B2Q13435 895 aaKnown RBP27.8■■■□□ 2.04
HCFC1R1-204ENST00000573095 CPDO75976 1380 aa27.8■■■□□ 2.04
HCFC1R1-204ENST00000573095 USP6P35125 1406 aa27.79■■■□□ 2.04
HCFC1R1-204ENST00000573095 ROCK2O75116 1388 aaKnown RBP27.79■■■□□ 2.04
HCFC1R1-204ENST00000573095 CHRNA2Q15822 529 aa27.79■■■□□ 2.04
HCFC1R1-204ENST00000573095 ABTB2Q8N961 1025 aa27.79■■■□□ 2.04
HCFC1R1-204ENST00000573095 SPATA31A1Q5TZJ5 1347 aa27.78■■■□□ 2.04
HCFC1R1-204ENST00000573095 ZC3H6P61129 1189 aaKnown RBP27.78■■■□□ 2.04
HCFC1R1-204ENST00000573095 DEFB132Q7Z7B7 95 aa27.77■■■□□ 2.04
HCFC1R1-204ENST00000573095 SSH2Q76I76 1423 aa27.76■■■□□ 2.04
HCFC1R1-204ENST00000573095 CAMTA1Q9Y6Y1 1673 aa27.76■■■□□ 2.03
HCFC1R1-204ENST00000573095 TNS1Q9HBL0 1735 aaKnown RBP27.75■■■□□ 2.03
HCFC1R1-204ENST00000573095 NEUROD1Q13562 356 aa27.75■■■□□ 2.03
HCFC1R1-204ENST00000573095 SLIT3O75094 1523 aa27.75■■■□□ 2.03
HCFC1R1-204ENST00000573095 AKAP12Q02952 1782 aa27.75■■■□□ 2.03
HCFC1R1-204ENST00000573095 PIK3C2AO00443 1686 aa27.75■■■□□ 2.03
HCFC1R1-204ENST00000573095 EVC2Q86UK5 1308 aa27.74■■■□□ 2.03
HCFC1R1-204ENST00000573095 NLRP13Q86W25 1043 aa27.74■■■□□ 2.03
HCFC1R1-204ENST00000573095 STRN4Q9NRL3 753 aa27.73■■■□□ 2.03
HCFC1R1-204ENST00000573095 CABP1Q9NZU7 370 aa27.72■■■□□ 2.03
HCFC1R1-204ENST00000573095 GCP02774 474 aa27.69■■■□□ 2.02
HCFC1R1-204ENST00000573095 BAG6P46379 1132 aa27.69■■■□□ 2.02
HCFC1R1-204ENST00000573095 COL5A2P05997 1499 aaPredicted RBP27.69■■■□□ 2.02
HCFC1R1-204ENST00000573095 DISP2A7MBM2 1401 aa27.68■■■□□ 2.02
HCFC1R1-204ENST00000573095 BARGINQ6ZT62 677 aa27.67■■■□□ 2.02
HCFC1R1-204ENST00000573095 SBNO2Q9Y2G9 1366 aa27.67■■■□□ 2.02
HCFC1R1-204ENST00000573095 EVA1CP58658 441 aa27.66■■■□□ 2.02
HCFC1R1-204ENST00000573095 PARP4Q9UKK3 1724 aaKnown RBP27.66■■■□□ 2.02
HCFC1R1-204ENST00000573095 MON2Q7Z3U7 1717 aa27.65■■■□□ 2.02
HCFC1R1-204ENST00000573095 FAM182BQ5T319 152 aa27.65■■■□□ 2.02
HCFC1R1-204ENST00000573095 COL18A1P39060 1754 aa27.64■■■□□ 2.02
HCFC1R1-204ENST00000573095 LARP1Q6PKG0 1096 aaKnown RBP27.64■■■□□ 2.02
HCFC1R1-204ENST00000573095 SRCAPQ6ZRS2 3230 aa27.64■■■□□ 2.02
HCFC1R1-204ENST00000573095 NLRP6P59044 892 aa27.63■■■□□ 2.01
HCFC1R1-204ENST00000573095 USP35Q9P2H5 1018 aa27.63■■■□□ 2.01
HCFC1R1-204ENST00000573095 LRP5O75197 1615 aa27.62■■■□□ 2.01
HCFC1R1-204ENST00000573095 AATKQ6ZMQ8 1374 aa27.61■■■□□ 2.01
HCFC1R1-204ENST00000573095 CPSF1Q10570 1443 aaKnown RBP27.61■■■□□ 2.01
HCFC1R1-204ENST00000573095 TCP11L2Q8N4U5 519 aa27.61■■■□□ 2.01
HCFC1R1-204ENST00000573095 CRB1P82279 1406 aa27.6■■■□□ 2.01
HCFC1R1-204ENST00000573095 WNK3Q9BYP7 1800 aa27.6■■■□□ 2.01
HCFC1R1-204ENST00000573095 FAM196AQ6ZSG2 479 aa27.59■■■□□ 2.01
HCFC1R1-204ENST00000573095 ZNF692Q9BU19 519 aaPredicted RBP27.59■■■□□ 2.01
HCFC1R1-204ENST00000573095 THRAP3Q9Y2W1 955 aaKnown RBP27.59■■■□□ 2.01
HCFC1R1-204ENST00000573095 TTC21BQ7Z4L5 1316 aa27.58■■■□□ 2.01
HCFC1R1-204ENST00000573095 USP54Q70EL1 1684 aa27.58■■■□□ 2.01
HCFC1R1-204ENST00000573095 TONSLQ96HA7 1378 aa27.58■■■□□ 2.01
HCFC1R1-204ENST00000573095 TTC21AQ8NDW8 1320 aa27.57■■■□□ 2
HCFC1R1-204ENST00000573095 LRRC37A3O60309 1634 aa27.56■■■□□ 2
HCFC1R1-204ENST00000573095 EN1Q05925 392 aaPredicted RBP27.56■■■□□ 2
HCFC1R1-204ENST00000573095 CARD11Q9BXL7 1154 aa27.55■■■□□ 2
HCFC1R1-204ENST00000573095 NFAT5O94916 1531 aa27.55■■■□□ 2
HCFC1R1-204ENST00000573095 RREB1Q92766 1687 aa27.54■■■□□ 2
HCFC1R1-204ENST00000573095 RGPD5Q99666 1765 aa27.53■■■□□ 2
HCFC1R1-204ENST00000573095 ABCC6O95255 1503 aa27.53■■■□□ 2
HCFC1R1-204ENST00000573095 KTN1Q86UP2 1357 aaKnown RBP27.53■■■□□ 2
HCFC1R1-204ENST00000573095 PDE3BQ13370 1112 aa27.53■■■□□ 2
HCFC1R1-204ENST00000573095 ZBTB7CA1YPR0 619 aa27.52■■■□□ 2
HCFC1R1-204ENST00000573095 PEAK1Q9H792 1746 aa27.52■■■□□ 2
HCFC1R1-204ENST00000573095 CD163L1Q9NR16 1453 aa27.51■■■□□ 2
HCFC1R1-204ENST00000573095 PARD3Q8TEW0 1356 aa27.51■■□□□ 1.99
HCFC1R1-204ENST00000573095 TRIM37O94972 964 aa27.51■■□□□ 1.99
HCFC1R1-204ENST00000573095 KCNH5Q8NCM2 988 aa27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms