RNA–Protein interactions for RNA: ENST00000572723.1

PRPF8-206, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-206ENST00000572723 ABCA3Q99758 1704 aa16.9■□□□□ 0.3
PRPF8-206ENST00000572723 ATP7BP35670 1465 aa16.89■□□□□ 0.29
PRPF8-206ENST00000572723 ITSN1Q15811 1721 aa16.89■□□□□ 0.29
PRPF8-206ENST00000572723 ACEP12821 1306 aa16.89■□□□□ 0.29
PRPF8-206ENST00000572723 PLCH1Q4KWH8 1693 aa16.88■□□□□ 0.29
PRPF8-206ENST00000572723 CENPJQ9HC77 1338 aaPredicted RBP16.88■□□□□ 0.29
PRPF8-206ENST00000572723 POLR3AO14802 1390 aaPredicted RBP16.88■□□□□ 0.29
PRPF8-206ENST00000572723 BRWD3Q6RI45 1802 aa16.86■□□□□ 0.29
PRPF8-206ENST00000572723 KRT27Q7Z3Y8 459 aa16.86■□□□□ 0.29
PRPF8-206ENST00000572723 SIN3AQ96ST3 1273 aa16.86■□□□□ 0.29
PRPF8-206ENST00000572723 PRDM11Q9NQV5 511 aa16.86■□□□□ 0.29
PRPF8-206ENST00000572723 EP400Q96L91 3159 aa16.86■□□□□ 0.29
PRPF8-206ENST00000572723 COL14A1Q05707 1796 aaKnown RBP16.85■□□□□ 0.29
PRPF8-206ENST00000572723 SRPK2P78362 688 aaKnown RBP16.85■□□□□ 0.29
PRPF8-206ENST00000572723 ZRANB1Q9UGI0 708 aa16.85■□□□□ 0.29
PRPF8-206ENST00000572723 NEUROD1Q13562 356 aa16.84■□□□□ 0.29
PRPF8-206ENST00000572723 BLMP54132 1417 aaPredicted RBP16.83■□□□□ 0.28
PRPF8-206ENST00000572723 SF3B2Q13435 895 aaKnown RBP16.83■□□□□ 0.28
PRPF8-206ENST00000572723 FAM98CQ17RN3 349 aaKnown RBP16.83■□□□□ 0.28
PRPF8-206ENST00000572723 SPATA31A5Q5VU36 1347 aa16.83■□□□□ 0.28
PRPF8-206ENST00000572723 SPATA31A7Q8IWB4 1347 aa16.83■□□□□ 0.28
PRPF8-206ENST00000572723 ABTB2Q8N961 1025 aa16.83■□□□□ 0.28
PRPF8-206ENST00000572723 NUTM2GQ5VZR2 741 aa16.82■□□□□ 0.28
PRPF8-206ENST00000572723 CABP2Q9NPB3 220 aa16.82■□□□□ 0.28
PRPF8-206ENST00000572723 BRD4O60885 1362 aaPredicted RBP16.81■□□□□ 0.28
PRPF8-206ENST00000572723 KIAA0232Q92628 1395 aa16.81■□□□□ 0.28
PRPF8-206ENST00000572723 A0A0G2JS52 829 aa16.81■□□□□ 0.28
PRPF8-206ENST00000572723 ZC3H6P61129 1189 aaKnown RBP16.81■□□□□ 0.28
PRPF8-206ENST00000572723 MYT1Q01538 1121 aa16.81■□□□□ 0.28
PRPF8-206ENST00000572723 NLRP13Q86W25 1043 aa16.81■□□□□ 0.28
PRPF8-206ENST00000572723 NRAPQ86VF7 1730 aa16.81■□□□□ 0.28
PRPF8-206ENST00000572723 CRYBG1Q9Y4K1 1723 aa16.81■□□□□ 0.28
PRPF8-206ENST00000572723 CHRNA2Q15822 529 aa16.8■□□□□ 0.28
PRPF8-206ENST00000572723 TOPAZ1Q8N9V7 1692 aa16.8■□□□□ 0.28
PRPF8-206ENST00000572723 PPIP5K1Q6PFW1 1433 aa16.79■□□□□ 0.28
PRPF8-206ENST00000572723 CABP1Q9NZU7 370 aa16.79■□□□□ 0.28
PRPF8-206ENST00000572723 EVC2Q86UK5 1308 aa16.78■□□□□ 0.28
PRPF8-206ENST00000572723 EVA1CP58658 441 aa16.78■□□□□ 0.28
PRPF8-206ENST00000572723 DEFB132Q7Z7B7 95 aa16.78■□□□□ 0.28
PRPF8-206ENST00000572723 SPATA31A1Q5TZJ5 1347 aa16.77■□□□□ 0.28
PRPF8-206ENST00000572723 GCP02774 474 aa16.77■□□□□ 0.28
PRPF8-206ENST00000572723 STRN4Q9NRL3 753 aa16.77■□□□□ 0.28
PRPF8-206ENST00000572723 ROCK2O75116 1388 aaKnown RBP16.76■□□□□ 0.27
PRPF8-206ENST00000572723 CPDO75976 1380 aa16.76■□□□□ 0.27
PRPF8-206ENST00000572723 QRICH2Q9H0J4 1663 aa16.75■□□□□ 0.27
PRPF8-206ENST00000572723 USP19O94966 1318 aa16.75■□□□□ 0.27
PRPF8-206ENST00000572723 ZNF692Q9BU19 519 aaPredicted RBP16.75■□□□□ 0.27
PRPF8-206ENST00000572723 TRPM1Q7Z4N2 1603 aa16.74■□□□□ 0.27
PRPF8-206ENST00000572723 PHRF1Q9P1Y6 1649 aaKnown RBP16.74■□□□□ 0.27
PRPF8-206ENST00000572723 NLRP6P59044 892 aa16.74■□□□□ 0.27
PRPF8-206ENST00000572723 BAG6P46379 1132 aa16.73■□□□□ 0.27
PRPF8-206ENST00000572723 BARGINQ6ZT62 677 aa16.73■□□□□ 0.27
PRPF8-206ENST00000572723 USP6P35125 1406 aa16.71■□□□□ 0.27
PRPF8-206ENST00000572723 FAM182BQ5T319 152 aa16.71■□□□□ 0.27
PRPF8-206ENST00000572723 USP35Q9P2H5 1018 aa16.71■□□□□ 0.27
PRPF8-206ENST00000572723 CAMTA1Q9Y6Y1 1673 aa16.7■□□□□ 0.26
PRPF8-206ENST00000572723 LARP1Q6PKG0 1096 aaKnown RBP16.7■□□□□ 0.26
PRPF8-206ENST00000572723 FAM196AQ6ZSG2 479 aa16.7■□□□□ 0.26
PRPF8-206ENST00000572723 TCP11L2Q8N4U5 519 aa16.7■□□□□ 0.26
PRPF8-206ENST00000572723 THRAP3Q9Y2W1 955 aaKnown RBP16.7■□□□□ 0.26
PRPF8-206ENST00000572723 SSH2Q76I76 1423 aa16.7■□□□□ 0.26
PRPF8-206ENST00000572723 THSD7AQ9UPZ6 1657 aa16.69■□□□□ 0.26
PRPF8-206ENST00000572723 NRKQ7Z2Y5 1582 aa16.68■□□□□ 0.26
PRPF8-206ENST00000572723 PDE3BQ13370 1112 aa16.68■□□□□ 0.26
PRPF8-206ENST00000572723 CARD11Q9BXL7 1154 aa16.68■□□□□ 0.26
PRPF8-206ENST00000572723 SRCAPQ6ZRS2 3230 aa16.67■□□□□ 0.26
PRPF8-206ENST00000572723 TTC21BQ7Z4L5 1316 aa16.67■□□□□ 0.26
PRPF8-206ENST00000572723 AATKQ6ZMQ8 1374 aa16.66■□□□□ 0.26
PRPF8-206ENST00000572723 EN1Q05925 392 aaPredicted RBP16.66■□□□□ 0.26
PRPF8-206ENST00000572723 KCNH5Q8NCM2 988 aa16.66■□□□□ 0.26
PRPF8-206ENST00000572723 TTC21AQ8NDW8 1320 aa16.66■□□□□ 0.26
PRPF8-206ENST00000572723 LMO7Q8WWI1 1683 aa16.65■□□□□ 0.26
PRPF8-206ENST00000572723 SBNO2Q9Y2G9 1366 aa16.65■□□□□ 0.26
PRPF8-206ENST00000572723 ZBTB7CA1YPR0 619 aa16.64■□□□□ 0.25
PRPF8-206ENST00000572723 TRIM37O94972 964 aa16.64■□□□□ 0.25
PRPF8-206ENST00000572723 RGPD1P0DJD0 1748 aa16.64■□□□□ 0.25
PRPF8-206ENST00000572723 CPSF1Q10570 1443 aaKnown RBP16.63■□□□□ 0.25
PRPF8-206ENST00000572723 C11orf95C9JLR9 678 aaPredicted RBP16.63■□□□□ 0.25
PRPF8-206ENST00000572723 ARHGEF25Q86VW2 580 aa16.63■□□□□ 0.25
PRPF8-206ENST00000572723 SLIT3O75094 1523 aa16.63■□□□□ 0.25
PRPF8-206ENST00000572723 KTN1Q86UP2 1357 aaKnown RBP16.63■□□□□ 0.25
PRPF8-206ENST00000572723 TONSLQ96HA7 1378 aa16.63■□□□□ 0.25
PRPF8-206ENST00000572723 DISP2A7MBM2 1401 aa16.62■□□□□ 0.25
PRPF8-206ENST00000572723 COL5A2P05997 1499 aaPredicted RBP16.62■□□□□ 0.25
PRPF8-206ENST00000572723 TRIM26Q12899 539 aaPredicted RBP16.62■□□□□ 0.25
PRPF8-206ENST00000572723 PUS7Q96PZ0 661 aaKnown RBP16.62■□□□□ 0.25
PRPF8-206ENST00000572723 CRB1P82279 1406 aa16.62■□□□□ 0.25
PRPF8-206ENST00000572723 APBA3O96018 575 aa16.61■□□□□ 0.25
PRPF8-206ENST00000572723 CAMKK2Q96RR4 588 aa16.61■□□□□ 0.25
PRPF8-206ENST00000572723 AXIN2Q9Y2T1 843 aa16.61■□□□□ 0.25
PRPF8-206ENST00000572723 AKAP12Q02952 1782 aa16.61■□□□□ 0.25
PRPF8-206ENST00000572723 PIK3C2AO00443 1686 aa16.6■□□□□ 0.25
PRPF8-206ENST00000572723 EZH2Q15910 746 aaKnown RBP16.6■□□□□ 0.25
PRPF8-206ENST00000572723 TOM1L2Q6ZVM7 507 aa16.6■□□□□ 0.25
PRPF8-206ENST00000572723 COL18A1P39060 1754 aa16.59■□□□□ 0.25
PRPF8-206ENST00000572723 SLC24A1O60721 1099 aa16.59■□□□□ 0.25
PRPF8-206ENST00000572723 TMC1Q8TDI8 760 aa16.59■□□□□ 0.25
PRPF8-206ENST00000572723 PSDA5PKW4 1024 aaPredicted RBP16.58■□□□□ 0.24
PRPF8-206ENST00000572723 CDCA7Q9BWT1 371 aaPredicted RBP16.58■□□□□ 0.24
PRPF8-206ENST00000572723 SLC12A5Q9H2X9 1139 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms