RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 PNPLA6Q8IY17 1366 aa25.71■■□□□ 1.71
RPAIN-210ENST00000571613 NME9Q86XW9 330 aa25.71■■□□□ 1.71
RPAIN-210ENST00000571613 SHPRHQ149N8 1683 aa25.71■■□□□ 1.71
RPAIN-210ENST00000571613 SUPT16HQ9Y5B9 1047 aaKnown RBP25.7■■□□□ 1.7
RPAIN-210ENST00000571613 NRKQ7Z2Y5 1582 aa25.7■■□□□ 1.7
RPAIN-210ENST00000571613 SSH2Q76I76 1423 aa25.69■■□□□ 1.7
RPAIN-210ENST00000571613 NCBP3Q53F19 620 aaKnown RBP25.68■■□□□ 1.7
RPAIN-210ENST00000571613 RUNDC1Q96C34 613 aa25.68■■□□□ 1.7
RPAIN-210ENST00000571613 NALCNQ8IZF0 1738 aa25.68■■□□□ 1.7
RPAIN-210ENST00000571613 PNNQ9H307 717 aaKnown RBP25.68■■□□□ 1.7
RPAIN-210ENST00000571613 SALL2Q9Y467 1007 aaPredicted RBP25.68■■□□□ 1.7
RPAIN-210ENST00000571613 POLKQ9UBT6 870 aa25.67■■□□□ 1.7
RPAIN-210ENST00000571613 DIAPH1O60610 1272 aaKnown RBP25.66■■□□□ 1.7
RPAIN-210ENST00000571613 PMFBP1Q8TBY8 1022 aa25.66■■□□□ 1.7
RPAIN-210ENST00000571613 COL3A1P02461 1466 aaPredicted RBP25.65■■□□□ 1.7
RPAIN-210ENST00000571613 C14orf37Q86TY3 774 aa25.65■■□□□ 1.7
RPAIN-210ENST00000571613 PROSER2Q86WR7 435 aaPredicted RBP25.65■■□□□ 1.7
RPAIN-210ENST00000571613 APAF1O14727 1248 aa25.64■■□□□ 1.7
RPAIN-210ENST00000571613 CCDC146Q8IYE0 955 aa25.64■■□□□ 1.7
RPAIN-210ENST00000571613 NCOA3Q9Y6Q9 1424 aa25.64■■□□□ 1.7
RPAIN-210ENST00000571613 U2AF1L5P0DN76 240 aaPredicted RBP25.64■■□□□ 1.69
RPAIN-210ENST00000571613 U2AF1Q01081 240 aaKnown RBP eCLIP25.64■■□□□ 1.69
RPAIN-210ENST00000571613 FKBP8Q14318 412 aa25.64■■□□□ 1.69
RPAIN-210ENST00000571613 OVOS2A0A0J9YW53 1432 aa25.63■■□□□ 1.69
RPAIN-210ENST00000571613 OVOS2Q6IE36 1432 aa25.63■■□□□ 1.69
RPAIN-210ENST00000571613 SENP3-EIF4A1A0A087X0R7 540 aa25.62■■□□□ 1.69
RPAIN-210ENST00000571613 ERICH6BQ5W0A0 696 aa25.62■■□□□ 1.69
RPAIN-210ENST00000571613 ZNF521Q96K83 1311 aa25.62■■□□□ 1.69
RPAIN-210ENST00000571613 PHF8Q9UPP1 1060 aa25.62■■□□□ 1.69
RPAIN-210ENST00000571613 CDK12Q9NYV4 1490 aaPredicted RBP25.62■■□□□ 1.69
RPAIN-210ENST00000571613 USP31Q70CQ4 1352 aa25.61■■□□□ 1.69
RPAIN-210ENST00000571613 RGPD8O14715 1765 aaPredicted RBP25.61■■□□□ 1.69
RPAIN-210ENST00000571613 GOLGA2Q08379 1002 aa25.61■■□□□ 1.69
RPAIN-210ENST00000571613 LMTK3Q96Q04 1460 aa25.6■■□□□ 1.69
RPAIN-210ENST00000571613 C19orf44Q9H6X5 657 aa25.59■■□□□ 1.69
RPAIN-210ENST00000571613 ZRANB1Q9UGI0 708 aa25.59■■□□□ 1.69
RPAIN-210ENST00000571613 MAP2P11137 1827 aaKnown RBP25.58■■□□□ 1.69
RPAIN-210ENST00000571613 U2SURPO15042 1029 aaKnown RBP25.58■■□□□ 1.68
RPAIN-210ENST00000571613 HSPA2P54652 639 aa25.58■■□□□ 1.68
RPAIN-210ENST00000571613 PPM1GO15355 546 aaPredicted RBP25.56■■□□□ 1.68
RPAIN-210ENST00000571613 CCDC27Q2M243 656 aa25.55■■□□□ 1.68
RPAIN-210ENST00000571613 FCHSD2O94868 740 aa25.55■■□□□ 1.68
RPAIN-210ENST00000571613 TCP11L2Q8N4U5 519 aa25.55■■□□□ 1.68
RPAIN-210ENST00000571613 RBM33Q96EV2 1170 aaKnown RBP25.55■■□□□ 1.68
RPAIN-210ENST00000571613 EMILIN1Q9Y6C2 1016 aa25.55■■□□□ 1.68
RPAIN-210ENST00000571613 RNF123Q5XPI4 1314 aa25.54■■□□□ 1.68
RPAIN-210ENST00000571613 DCCP43146 1447 aa25.54■■□□□ 1.68
RPAIN-210ENST00000571613 CDCA7LQ96GN5 454 aa25.54■■□□□ 1.68
RPAIN-210ENST00000571613 IQSEC2Q5JU85 1478 aa25.54■■□□□ 1.68
RPAIN-210ENST00000571613 ESCO1Q5FWF5 840 aa25.53■■□□□ 1.68
RPAIN-210ENST00000571613 E9PSI1 815 aa25.52■■□□□ 1.68
RPAIN-210ENST00000571613 NEFMP07197 916 aa25.52■■□□□ 1.68
RPAIN-210ENST00000571613 LRRC7Q96NW7 1537 aa25.52■■□□□ 1.68
RPAIN-210ENST00000571613 MAPK8IP3Q9UPT6 1336 aa25.52■■□□□ 1.68
RPAIN-210ENST00000571613 SLFN5Q08AF3 891 aa25.51■■□□□ 1.67
RPAIN-210ENST00000571613 RCAN3Q9UKA8 241 aa25.51■■□□□ 1.67
RPAIN-210ENST00000571613 RRS1Q15050 365 aaKnown RBP25.5■■□□□ 1.67
RPAIN-210ENST00000571613 WWC1Q8IX03 1113 aa25.5■■□□□ 1.67
RPAIN-210ENST00000571613 PLEKHF1Q96S99 279 aa25.5■■□□□ 1.67
RPAIN-210ENST00000571613 FBLN1P23142 703 aa25.49■■□□□ 1.67
RPAIN-210ENST00000571613 IL13P35225 146 aa25.49■■□□□ 1.67
RPAIN-210ENST00000571613 PSME1Q06323 249 aa25.49■■□□□ 1.67
RPAIN-210ENST00000571613 WDR63Q8IWG1 891 aa25.49■■□□□ 1.67
RPAIN-210ENST00000571613 PHF23Q9BUL5 403 aaPredicted RBP25.49■■□□□ 1.67
RPAIN-210ENST00000571613 TMEM94Q12767 1356 aa25.49■■□□□ 1.67
RPAIN-210ENST00000571613 ATF3P18847 181 aa25.48■■□□□ 1.67
RPAIN-210ENST00000571613 NLRP6P59044 892 aa25.48■■□□□ 1.67
RPAIN-210ENST00000571613 DUSP27Q5VZP5 1158 aa25.48■■□□□ 1.67
RPAIN-210ENST00000571613 TRMT2AQ8IZ69 625 aaKnown RBP25.48■■□□□ 1.67
RPAIN-210ENST00000571613 USP54Q70EL1 1684 aa25.48■■□□□ 1.67
RPAIN-210ENST00000571613 KIF24Q5T7B8 1368 aa25.47■■□□□ 1.67
RPAIN-210ENST00000571613 ABTB2Q8N961 1025 aa25.47■■□□□ 1.67
RPAIN-210ENST00000571613 PIK3C2AO00443 1686 aa25.47■■□□□ 1.67
RPAIN-210ENST00000571613 PAK3O75914 559 aaPredicted RBP25.45■■□□□ 1.67
RPAIN-210ENST00000571613 CADPS2Q86UW7 1296 aa25.45■■□□□ 1.67
RPAIN-210ENST00000571613 C1orf167Q5SNV9 1468 aa25.44■■□□□ 1.66
RPAIN-210ENST00000571613 KIF1AQ12756 1690 aa25.44■■□□□ 1.66
RPAIN-210ENST00000571613 RSPH6AQ9H0K4 717 aa25.43■■□□□ 1.66
RPAIN-210ENST00000571613 SBNO1A3KN83 1393 aa25.43■■□□□ 1.66
RPAIN-210ENST00000571613 STRCQ7RTU9 1775 aa25.43■■□□□ 1.66
RPAIN-210ENST00000571613 TMPOP42166 694 aaKnown RBP25.42■■□□□ 1.66
RPAIN-210ENST00000571613 FLT4P35916 1363 aa25.42■■□□□ 1.66
RPAIN-210ENST00000571613 MSH6P52701 1360 aa25.42■■□□□ 1.66
RPAIN-210ENST00000571613 NEUROD2Q15784 382 aa25.42■■□□□ 1.66
RPAIN-210ENST00000571613 DMRT2Q9Y5R5 561 aa25.41■■□□□ 1.66
RPAIN-210ENST00000571613 STRCP1A6NGW2 1772 aa25.41■■□□□ 1.66
RPAIN-210ENST00000571613 PELP1Q8IZL8 1130 aaKnown RBP25.4■■□□□ 1.66
RPAIN-210ENST00000571613 ORAI2Q96SN7 254 aa25.4■■□□□ 1.66
RPAIN-210ENST00000571613 RRP7AQ9Y3A4 280 aaKnown RBP25.4■■□□□ 1.66
RPAIN-210ENST00000571613 MAP3K19Q56UN5 1328 aa25.39■■□□□ 1.66
RPAIN-210ENST00000571613 PRKAR2BP31323 418 aa25.39■■□□□ 1.65
RPAIN-210ENST00000571613 RRP1P56182 461 aaKnown RBP25.39■■□□□ 1.65
RPAIN-210ENST00000571613 KCNH5Q8NCM2 988 aa25.39■■□□□ 1.65
RPAIN-210ENST00000571613 AMPHP49418 695 aa25.38■■□□□ 1.65
RPAIN-210ENST00000571613 MST1RQ04912 1400 aa25.38■■□□□ 1.65
RPAIN-210ENST00000571613 EIF4A2Q14240 407 aaKnown RBP25.37■■□□□ 1.65
RPAIN-210ENST00000571613 MYH16Q9H6N6 1097 aa25.37■■□□□ 1.65
RPAIN-210ENST00000571613 FOXO3O43524 673 aa25.36■■□□□ 1.65
RPAIN-210ENST00000571613 IL16Q14005 1332 aa25.36■■□□□ 1.65
RPAIN-210ENST00000571613 RIPK4P57078 832 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms