RNA–Protein interactions for RNA: ENST00000570904.5

LITAF-205, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-205ENST00000570904 NEUROD1Q13562 356 aa29.8■■■□□ 2.36
LITAF-205ENST00000570904 CCDC9Q9Y3X0 531 aaKnown RBP29.8■■■□□ 2.36
LITAF-205ENST00000570904 CCDC61Q9Y6R9 512 aa29.78■■■□□ 2.36
LITAF-205ENST00000570904 CRYBG1Q9Y4K1 1723 aa29.78■■■□□ 2.36
LITAF-205ENST00000570904 ACEP12821 1306 aa29.77■■■□□ 2.36
LITAF-205ENST00000570904 POLR3AO14802 1390 aaPredicted RBP29.77■■■□□ 2.36
LITAF-205ENST00000570904 NRAPQ86VF7 1730 aa29.75■■■□□ 2.35
LITAF-205ENST00000570904 BTG4Q9NY30 223 aa29.75■■■□□ 2.35
LITAF-205ENST00000570904 COL14A1Q05707 1796 aaKnown RBP29.75■■■□□ 2.35
LITAF-205ENST00000570904 PLEKHG3A1L390 1219 aa29.74■■■□□ 2.35
LITAF-205ENST00000570904 SRPK2P78362 688 aaKnown RBP29.74■■■□□ 2.35
LITAF-205ENST00000570904 SEPT12Q8IYM1 358 aa29.74■■■□□ 2.35
LITAF-205ENST00000570904 QRICH2Q9H0J4 1663 aa29.74■■■□□ 2.35
LITAF-205ENST00000570904 NBPF8Q3BBV2 869 aa29.73■■■□□ 2.35
LITAF-205ENST00000570904 NUTM2GQ5VZR2 741 aa29.73■■■□□ 2.35
LITAF-205ENST00000570904 CABP2Q9NPB3 220 aa29.73■■■□□ 2.35
LITAF-205ENST00000570904 TRPM1Q7Z4N2 1603 aa29.73■■■□□ 2.35
LITAF-205ENST00000570904 PPIP5K1Q6PFW1 1433 aa29.71■■■□□ 2.35
LITAF-205ENST00000570904 PRDM11Q9NQV5 511 aa29.7■■■□□ 2.35
LITAF-205ENST00000570904 BRWD3Q6RI45 1802 aa29.7■■■□□ 2.34
LITAF-205ENST00000570904 PHRF1Q9P1Y6 1649 aaKnown RBP29.69■■■□□ 2.34
LITAF-205ENST00000570904 ROCK2O75116 1388 aaKnown RBP29.67■■■□□ 2.34
LITAF-205ENST00000570904 KIAA0232Q92628 1395 aa29.67■■■□□ 2.34
LITAF-205ENST00000570904 ONECUT3O60422 494 aaPredicted RBP29.67■■■□□ 2.34
LITAF-205ENST00000570904 A0A0G2JS52 829 aa29.65■■■□□ 2.34
LITAF-205ENST00000570904 MYT1Q01538 1121 aa29.65■■■□□ 2.34
LITAF-205ENST00000570904 FAM98CQ17RN3 349 aaKnown RBP29.65■■■□□ 2.34
LITAF-205ENST00000570904 CHRNA2Q15822 529 aa29.64■■■□□ 2.34
LITAF-205ENST00000570904 ZC3H6P61129 1189 aaKnown RBP29.63■■■□□ 2.33
LITAF-205ENST00000570904 CCDC125Q86Z20 511 aa29.63■■■□□ 2.33
LITAF-205ENST00000570904 KRT27Q7Z3Y8 459 aa29.62■■■□□ 2.33
LITAF-205ENST00000570904 ABTB2Q8N961 1025 aa29.62■■■□□ 2.33
LITAF-205ENST00000570904 CABP1Q9NZU7 370 aa29.6■■■□□ 2.33
LITAF-205ENST00000570904 SPATA31A5Q5VU36 1347 aa29.6■■■□□ 2.33
LITAF-205ENST00000570904 SPATA31A7Q8IWB4 1347 aa29.6■■■□□ 2.33
LITAF-205ENST00000570904 BLMP54132 1417 aaPredicted RBP29.6■■■□□ 2.33
LITAF-205ENST00000570904 NRKQ7Z2Y5 1582 aa29.6■■■□□ 2.33
LITAF-205ENST00000570904 EVC2Q86UK5 1308 aa29.59■■■□□ 2.33
LITAF-205ENST00000570904 USP19O94966 1318 aa29.57■■■□□ 2.32
LITAF-205ENST00000570904 STRN4Q9NRL3 753 aa29.56■■■□□ 2.32
LITAF-205ENST00000570904 USP6P35125 1406 aa29.55■■■□□ 2.32
LITAF-205ENST00000570904 NLRP13Q86W25 1043 aa29.53■■■□□ 2.32
LITAF-205ENST00000570904 BRD4O60885 1362 aaPredicted RBP29.52■■■□□ 2.32
LITAF-205ENST00000570904 SPATA31A1Q5TZJ5 1347 aa29.51■■■□□ 2.32
LITAF-205ENST00000570904 THSD7AQ9UPZ6 1657 aa29.51■■■□□ 2.31
LITAF-205ENST00000570904 DEFB132Q7Z7B7 95 aa29.51■■■□□ 2.31
LITAF-205ENST00000570904 CPDO75976 1380 aa29.51■■■□□ 2.31
LITAF-205ENST00000570904 SF3B2Q13435 895 aaKnown RBP29.5■■■□□ 2.31
LITAF-205ENST00000570904 TONSLQ96HA7 1378 aa29.5■■■□□ 2.31
LITAF-205ENST00000570904 GCP02774 474 aa29.49■■■□□ 2.31
LITAF-205ENST00000570904 ZRANB1Q9UGI0 708 aa29.49■■■□□ 2.31
LITAF-205ENST00000570904 SRCAPQ6ZRS2 3230 aa29.49■■■□□ 2.31
LITAF-205ENST00000570904 SSH2Q76I76 1423 aa29.48■■■□□ 2.31
LITAF-205ENST00000570904 CAMTA1Q9Y6Y1 1673 aa29.48■■■□□ 2.31
LITAF-205ENST00000570904 LMO7Q8WWI1 1683 aa29.47■■■□□ 2.31
LITAF-205ENST00000570904 FAM182BQ5T319 152 aa29.47■■■□□ 2.31
LITAF-205ENST00000570904 CARD11Q9BXL7 1154 aa29.47■■■□□ 2.31
LITAF-205ENST00000570904 EVA1CP58658 441 aa29.46■■■□□ 2.31
LITAF-205ENST00000570904 NLRP6P59044 892 aa29.46■■■□□ 2.31
LITAF-205ENST00000570904 USP35Q9P2H5 1018 aa29.46■■■□□ 2.31
LITAF-205ENST00000570904 PIK3C2AO00443 1686 aa29.44■■■□□ 2.3
LITAF-205ENST00000570904 TRIM26Q12899 539 aaPredicted RBP29.44■■■□□ 2.3
LITAF-205ENST00000570904 ZBTB7CA1YPR0 619 aa29.43■■■□□ 2.3
LITAF-205ENST00000570904 LARP1Q6PKG0 1096 aaKnown RBP29.43■■■□□ 2.3
LITAF-205ENST00000570904 SLIT3O75094 1523 aa29.43■■■□□ 2.3
LITAF-205ENST00000570904 SBNO2Q9Y2G9 1366 aa29.41■■■□□ 2.3
LITAF-205ENST00000570904 TTC21BQ7Z4L5 1316 aa29.41■■■□□ 2.3
LITAF-205ENST00000570904 AKAP12Q02952 1782 aa29.39■■■□□ 2.3
LITAF-205ENST00000570904 ZNF692Q9BU19 519 aaPredicted RBP29.39■■■□□ 2.3
LITAF-205ENST00000570904 COL5A2P05997 1499 aaPredicted RBP29.39■■■□□ 2.3
LITAF-205ENST00000570904 CPSF1Q10570 1443 aaKnown RBP29.37■■■□□ 2.29
LITAF-205ENST00000570904 BAG6P46379 1132 aa29.37■■■□□ 2.29
LITAF-205ENST00000570904 BARGINQ6ZT62 677 aa29.36■■■□□ 2.29
LITAF-205ENST00000570904 TCP11L2Q8N4U5 519 aa29.35■■■□□ 2.29
LITAF-205ENST00000570904 KTN1Q86UP2 1357 aaKnown RBP29.35■■■□□ 2.29
LITAF-205ENST00000570904 AATKQ6ZMQ8 1374 aa29.34■■■□□ 2.29
LITAF-205ENST00000570904 RGPD1P0DJD0 1748 aa29.34■■■□□ 2.29
LITAF-205ENST00000570904 TTC21AQ8NDW8 1320 aa29.33■■■□□ 2.29
LITAF-205ENST00000570904 SOX12O15370 315 aa29.31■■■□□ 2.28
LITAF-205ENST00000570904 EN1Q05925 392 aaPredicted RBP29.3■■■□□ 2.28
LITAF-205ENST00000570904 CRB1P82279 1406 aa29.29■■■□□ 2.28
LITAF-205ENST00000570904 MON2Q7Z3U7 1717 aa29.29■■■□□ 2.28
LITAF-205ENST00000570904 PDE3BQ13370 1112 aa29.29■■■□□ 2.28
LITAF-205ENST00000570904 FAM196AQ6ZSG2 479 aa29.29■■■□□ 2.28
LITAF-205ENST00000570904 THRAP3Q9Y2W1 955 aaKnown RBP29.29■■■□□ 2.28
LITAF-205ENST00000570904 COL18A1P39060 1754 aa29.29■■■□□ 2.28
LITAF-205ENST00000570904 TNS1Q9HBL0 1735 aaKnown RBP29.28■■■□□ 2.28
LITAF-205ENST00000570904 TMC1Q8TDI8 760 aa29.28■■■□□ 2.28
LITAF-205ENST00000570904 CD163L1Q9NR16 1453 aa29.28■■■□□ 2.28
LITAF-205ENST00000570904 TRIM37O94972 964 aa29.27■■■□□ 2.28
LITAF-205ENST00000570904 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.27■■■□□ 2.28
LITAF-205ENST00000570904 AXIN2Q9Y2T1 843 aa29.27■■■□□ 2.28
LITAF-205ENST00000570904 ARHGEF25Q86VW2 580 aa29.26■■■□□ 2.27
LITAF-205ENST00000570904 KCNH5Q8NCM2 988 aa29.26■■■□□ 2.27
LITAF-205ENST00000570904 DISP2A7MBM2 1401 aa29.25■■■□□ 2.27
LITAF-205ENST00000570904 NFAT5O94916 1531 aa29.25■■■□□ 2.27
LITAF-205ENST00000570904 SLC12A5Q9H2X9 1139 aa29.24■■■□□ 2.27
LITAF-205ENST00000570904 TOM1L2Q6ZVM7 507 aa29.23■■■□□ 2.27
LITAF-205ENST00000570904 PARP4Q9UKK3 1724 aaKnown RBP29.23■■■□□ 2.27
LITAF-205ENST00000570904 WDR17Q8IZU2 1322 aa29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms