RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 ZC3H6P61129 1189 aaKnown RBP13.83□□□□□ -0.2
GTF3C1-212ENST00000570129 CHRNA2Q15822 529 aa13.83□□□□□ -0.2
GTF3C1-212ENST00000570129 ABTB2Q8N961 1025 aa13.83□□□□□ -0.2
GTF3C1-212ENST00000570129 QTRT2Q9H974 415 aaKnown RBP13.83□□□□□ -0.2
GTF3C1-212ENST00000570129 CD163L1Q9NR16 1453 aa13.82□□□□□ -0.2
GTF3C1-212ENST00000570129 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.82□□□□□ -0.2
GTF3C1-212ENST00000570129 SBNO2Q9Y2G9 1366 aa13.82□□□□□ -0.2
GTF3C1-212ENST00000570129 SSH2Q76I76 1423 aa13.81□□□□□ -0.2
GTF3C1-212ENST00000570129 HAP1P54257 671 aaPredicted RBP13.81□□□□□ -0.2
GTF3C1-212ENST00000570129 FNBP4Q8N3X1 1017 aaPredicted RBP13.81□□□□□ -0.2
GTF3C1-212ENST00000570129 USP21Q9UK80 565 aa13.81□□□□□ -0.2
GTF3C1-212ENST00000570129 COL22A1Q8NFW1 1626 aaPredicted RBP13.81□□□□□ -0.2
GTF3C1-212ENST00000570129 TTC21BQ7Z4L5 1316 aa13.81□□□□□ -0.2
GTF3C1-212ENST00000570129 SOX12O15370 315 aa13.8□□□□□ -0.2
GTF3C1-212ENST00000570129 FBLN1P23142 703 aa13.8□□□□□ -0.2
GTF3C1-212ENST00000570129 NME9Q86XW9 330 aa13.8□□□□□ -0.2
GTF3C1-212ENST00000570129 POLR3GLQ9BT43 218 aa13.8□□□□□ -0.2
GTF3C1-212ENST00000570129 USP6P35125 1406 aa13.8□□□□□ -0.2
GTF3C1-212ENST00000570129 CPSF1Q10570 1443 aaKnown RBP13.8□□□□□ -0.2
GTF3C1-212ENST00000570129 BCL9LQ86UU0 1499 aa13.8□□□□□ -0.2
GTF3C1-212ENST00000570129 NLRP6P59044 892 aa13.79□□□□□ -0.2
GTF3C1-212ENST00000570129 ARHGEF10O15013 1369 aa13.79□□□□□ -0.2
GTF3C1-212ENST00000570129 ALS2Q96Q42 1657 aa13.79□□□□□ -0.2
GTF3C1-212ENST00000570129 ZBTB7CA1YPR0 619 aa13.78□□□□□ -0.2
GTF3C1-212ENST00000570129 KTN1Q86UP2 1357 aaKnown RBP13.78□□□□□ -0.2
GTF3C1-212ENST00000570129 TMF1P82094 1093 aa13.77□□□□□ -0.21
GTF3C1-212ENST00000570129 ZNF772Q68DY9 489 aaPredicted RBP13.77□□□□□ -0.21
GTF3C1-212ENST00000570129 ATAD2Q6PL18 1390 aa13.77□□□□□ -0.21
GTF3C1-212ENST00000570129 KIAA0232Q92628 1395 aa13.77□□□□□ -0.21
GTF3C1-212ENST00000570129 CARD14Q9BXL6 1004 aa13.77□□□□□ -0.21
GTF3C1-212ENST00000570129 A0A1W2PP64 1363 aa13.76□□□□□ -0.21
GTF3C1-212ENST00000570129 GCP02774 474 aa13.76□□□□□ -0.21
GTF3C1-212ENST00000570129 RXRBP28702 533 aa13.76□□□□□ -0.21
GTF3C1-212ENST00000570129 EIF4G2P78344 907 aaKnown RBP eCLIP13.76□□□□□ -0.21
GTF3C1-212ENST00000570129 BTG4Q9NY30 223 aa13.76□□□□□ -0.21
GTF3C1-212ENST00000570129 USP19O94966 1318 aa13.75□□□□□ -0.21
GTF3C1-212ENST00000570129 UNC5CLQ8IV45 518 aa13.75□□□□□ -0.21
GTF3C1-212ENST00000570129 ZNF692Q9BU19 519 aaPredicted RBP13.75□□□□□ -0.21
GTF3C1-212ENST00000570129 ITSN1Q15811 1721 aa13.74□□□□□ -0.21
GTF3C1-212ENST00000570129 SLIT2O94813 1529 aa13.74□□□□□ -0.21
GTF3C1-212ENST00000570129 ATRNO75882 1429 aa13.73□□□□□ -0.21
GTF3C1-212ENST00000570129 SOCS7O14512 581 aa13.73□□□□□ -0.21
GTF3C1-212ENST00000570129 NLRP13Q86W25 1043 aa13.73□□□□□ -0.21
GTF3C1-212ENST00000570129 PUS7Q96PZ0 661 aaKnown RBP13.73□□□□□ -0.21
GTF3C1-212ENST00000570129 PRDM11Q9NQV5 511 aa13.73□□□□□ -0.21
GTF3C1-212ENST00000570129 AXIN2Q9Y2T1 843 aa13.73□□□□□ -0.21
GTF3C1-212ENST00000570129 RBM6P78332 1123 aaKnown RBP13.72□□□□□ -0.21
GTF3C1-212ENST00000570129 HDGFL2Q7Z4V5 671 aaPredicted RBP13.72□□□□□ -0.21
GTF3C1-212ENST00000570129 ABCA3Q99758 1704 aa13.72□□□□□ -0.21
GTF3C1-212ENST00000570129 CRYBG1Q9Y4K1 1723 aa13.71□□□□□ -0.21
GTF3C1-212ENST00000570129 GJD4Q96KN9 370 aaPredicted RBP13.71□□□□□ -0.21
GTF3C1-212ENST00000570129 STRN4Q9NRL3 753 aa13.71□□□□□ -0.21
GTF3C1-212ENST00000570129 TERF2IPQ9NYB0 399 aa13.71□□□□□ -0.21
GTF3C1-212ENST00000570129 TRPC5Q9UL62 973 aaPredicted RBP13.71□□□□□ -0.21
GTF3C1-212ENST00000570129 PIK3C2AO00443 1686 aa13.7□□□□□ -0.22
GTF3C1-212ENST00000570129 GGNBP2Q9H3C7 697 aa13.7□□□□□ -0.22
GTF3C1-212ENST00000570129 CCDC9Q9Y3X0 531 aaKnown RBP13.7□□□□□ -0.22
GTF3C1-212ENST00000570129 FYB1O15117 783 aa13.69□□□□□ -0.22
GTF3C1-212ENST00000570129 VPS72Q15906 364 aa13.69□□□□□ -0.22
GTF3C1-212ENST00000570129 LARP1Q6PKG0 1096 aaKnown RBP13.69□□□□□ -0.22
GTF3C1-212ENST00000570129 RGS12O14924 1447 aa13.69□□□□□ -0.22
GTF3C1-212ENST00000570129 AKAP12Q02952 1782 aa13.68□□□□□ -0.22
GTF3C1-212ENST00000570129 ARHGEF25Q86VW2 580 aa13.68□□□□□ -0.22
GTF3C1-212ENST00000570129 CAMTA1Q9Y6Y1 1673 aa13.68□□□□□ -0.22
GTF3C1-212ENST00000570129 TTC21AQ8NDW8 1320 aa13.67□□□□□ -0.22
GTF3C1-212ENST00000570129 FAM98CQ17RN3 349 aaKnown RBP13.67□□□□□ -0.22
GTF3C1-212ENST00000570129 FAM182BQ5T319 152 aa13.67□□□□□ -0.22
GTF3C1-212ENST00000570129 PANK3Q9H999 370 aa13.67□□□□□ -0.22
GTF3C1-212ENST00000570129 USP35Q9P2H5 1018 aa13.67□□□□□ -0.22
GTF3C1-212ENST00000570129 PHRF1Q9P1Y6 1649 aaKnown RBP13.67□□□□□ -0.22
GTF3C1-212ENST00000570129 MARF1Q9Y4F3 1742 aaKnown RBP13.67□□□□□ -0.22
GTF3C1-212ENST00000570129 NRKQ7Z2Y5 1582 aa13.66□□□□□ -0.22
GTF3C1-212ENST00000570129 KIF7Q2M1P5 1343 aa13.66□□□□□ -0.22
GTF3C1-212ENST00000570129 EDC4Q6P2E9 1401 aaKnown RBP13.66□□□□□ -0.22
GTF3C1-212ENST00000570129 USP31Q70CQ4 1352 aa13.66□□□□□ -0.22
GTF3C1-212ENST00000570129 ANKRD36BQ8N2N9 1353 aa13.66□□□□□ -0.22
GTF3C1-212ENST00000570129 GLI3P10071 1580 aa13.66□□□□□ -0.22
GTF3C1-212ENST00000570129 SEPT12Q8IYM1 358 aa13.65□□□□□ -0.22
GTF3C1-212ENST00000570129 BRD4O60885 1362 aaPredicted RBP13.65□□□□□ -0.22
GTF3C1-212ENST00000570129 SPATA31A5Q5VU36 1347 aa13.64□□□□□ -0.23
GTF3C1-212ENST00000570129 SPATA31A7Q8IWB4 1347 aa13.64□□□□□ -0.23
GTF3C1-212ENST00000570129 SLIT3O75094 1523 aa13.64□□□□□ -0.23
GTF3C1-212ENST00000570129 MON2Q7Z3U7 1717 aa13.64□□□□□ -0.23
GTF3C1-212ENST00000570129 PLCH1Q4KWH8 1693 aa13.64□□□□□ -0.23
GTF3C1-212ENST00000570129 CPDO75976 1380 aa13.64□□□□□ -0.23
GTF3C1-212ENST00000570129 EVA1CP58658 441 aa13.64□□□□□ -0.23
GTF3C1-212ENST00000570129 RRS1Q15050 365 aaKnown RBP13.63□□□□□ -0.23
GTF3C1-212ENST00000570129 CDCA8Q53HL2 280 aa13.63□□□□□ -0.23
GTF3C1-212ENST00000570129 NFAT5O94916 1531 aa13.63□□□□□ -0.23
GTF3C1-212ENST00000570129 NSD3Q9BZ95 1437 aa13.63□□□□□ -0.23
GTF3C1-212ENST00000570129 WASHC2AQ641Q2 1341 aa13.63□□□□□ -0.23
GTF3C1-212ENST00000570129 MYOM1P52179 1685 aa13.63□□□□□ -0.23
GTF3C1-212ENST00000570129 ONECUT3O60422 494 aaPredicted RBP13.62□□□□□ -0.23
GTF3C1-212ENST00000570129 SLC24A1O60721 1099 aa13.62□□□□□ -0.23
GTF3C1-212ENST00000570129 CNGB1Q14028 1251 aaPredicted RBP13.62□□□□□ -0.23
GTF3C1-212ENST00000570129 OVOS2A0A0J9YW53 1432 aa13.62□□□□□ -0.23
GTF3C1-212ENST00000570129 OVOS2Q6IE36 1432 aa13.62□□□□□ -0.23
GTF3C1-212ENST00000570129 SPATA31A1Q5TZJ5 1347 aa13.62□□□□□ -0.23
GTF3C1-212ENST00000570129 AATKQ6ZMQ8 1374 aa13.61□□□□□ -0.23
GTF3C1-212ENST00000570129 COL14A1Q05707 1796 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms