RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 ANKARQ7Z5J8 1434 aa14.62□□□□□ -0.07
PDXDC1-216ENST00000569715 SALL2Q9Y467 1007 aaPredicted RBP14.62□□□□□ -0.07
PDXDC1-216ENST00000569715 INSRP06213 1382 aa14.62□□□□□ -0.07
PDXDC1-216ENST00000569715 ZNF692Q9BU19 519 aaPredicted RBP14.61□□□□□ -0.07
PDXDC1-216ENST00000569715 MAP2P11137 1827 aaKnown RBP14.6□□□□□ -0.07
PDXDC1-216ENST00000569715 TTC21BQ7Z4L5 1316 aa14.6□□□□□ -0.07
PDXDC1-216ENST00000569715 COL3A1P02461 1466 aaPredicted RBP14.59□□□□□ -0.07
PDXDC1-216ENST00000569715 CCDC146Q8IYE0 955 aa14.59□□□□□ -0.07
PDXDC1-216ENST00000569715 SSH2Q76I76 1423 aa14.59□□□□□ -0.07
PDXDC1-216ENST00000569715 C14orf37Q86TY3 774 aa14.59□□□□□ -0.07
PDXDC1-216ENST00000569715 PROSER2Q86WR7 435 aaPredicted RBP14.58□□□□□ -0.08
PDXDC1-216ENST00000569715 NGDNQ8NEJ9 315 aaKnown RBP14.58□□□□□ -0.08
PDXDC1-216ENST00000569715 CFAP53Q96M91 514 aa14.56□□□□□ -0.08
PDXDC1-216ENST00000569715 PIK3C2AO00443 1686 aa14.56□□□□□ -0.08
PDXDC1-216ENST00000569715 COG3Q96JB2 828 aa14.56□□□□□ -0.08
PDXDC1-216ENST00000569715 OVOS2A0A0J9YW53 1432 aa14.56□□□□□ -0.08
PDXDC1-216ENST00000569715 OVOS2Q6IE36 1432 aa14.56□□□□□ -0.08
PDXDC1-216ENST00000569715 POLKQ9UBT6 870 aa14.55□□□□□ -0.08
PDXDC1-216ENST00000569715 EMILIN1Q9Y6C2 1016 aa14.55□□□□□ -0.08
PDXDC1-216ENST00000569715 TMEM94Q12767 1356 aa14.54□□□□□ -0.08
PDXDC1-216ENST00000569715 SMG6Q86US8 1419 aaKnown RBP14.54□□□□□ -0.08
PDXDC1-216ENST00000569715 PPM1GO15355 546 aaPredicted RBP14.54□□□□□ -0.08
PDXDC1-216ENST00000569715 PNPLA6Q8IY17 1366 aa14.53□□□□□ -0.08
PDXDC1-216ENST00000569715 PHF8Q9UPP1 1060 aa14.53□□□□□ -0.08
PDXDC1-216ENST00000569715 MARF1Q9Y4F3 1742 aaKnown RBP14.53□□□□□ -0.08
PDXDC1-216ENST00000569715 RRS1Q15050 365 aaKnown RBP14.53□□□□□ -0.08
PDXDC1-216ENST00000569715 XIRP1Q702N8 1843 aaKnown RBP14.53□□□□□ -0.08
PDXDC1-216ENST00000569715 AATKQ6ZMQ8 1374 aa14.52□□□□□ -0.08
PDXDC1-216ENST00000569715 APAF1O14727 1248 aa14.52□□□□□ -0.09
PDXDC1-216ENST00000569715 ESCO1Q5FWF5 840 aa14.52□□□□□ -0.09
PDXDC1-216ENST00000569715 CDCA7LQ96GN5 454 aa14.52□□□□□ -0.09
PDXDC1-216ENST00000569715 TTC21AQ8NDW8 1320 aa14.51□□□□□ -0.09
PDXDC1-216ENST00000569715 ORAI2Q96SN7 254 aa14.51□□□□□ -0.09
PDXDC1-216ENST00000569715 NUDCQ9Y266 331 aa14.51□□□□□ -0.09
PDXDC1-216ENST00000569715 SUPT16HQ9Y5B9 1047 aaKnown RBP14.51□□□□□ -0.09
PDXDC1-216ENST00000569715 U2AF1L5P0DN76 240 aaPredicted RBP14.51□□□□□ -0.09
PDXDC1-216ENST00000569715 U2AF1Q01081 240 aaKnown RBP eCLIP14.51□□□□□ -0.09
PDXDC1-216ENST00000569715 CDK12Q9NYV4 1490 aaPredicted RBP14.5□□□□□ -0.09
PDXDC1-216ENST00000569715 IQSEC2Q5JU85 1478 aa14.5□□□□□ -0.09
PDXDC1-216ENST00000569715 C19orf44Q9H6X5 657 aa14.5□□□□□ -0.09
PDXDC1-216ENST00000569715 PEAK1Q9H792 1746 aa14.5□□□□□ -0.09
PDXDC1-216ENST00000569715 U2SURPO15042 1029 aaKnown RBP14.5□□□□□ -0.09
PDXDC1-216ENST00000569715 SOX12O15370 315 aa14.5□□□□□ -0.09
PDXDC1-216ENST00000569715 USP31Q70CQ4 1352 aa14.49□□□□□ -0.09
PDXDC1-216ENST00000569715 NUTM2GQ5VZR2 741 aa14.49□□□□□ -0.09
PDXDC1-216ENST00000569715 C1orf167Q5SNV9 1468 aa14.49□□□□□ -0.09
PDXDC1-216ENST00000569715 DIAPH1O60610 1272 aaKnown RBP14.49□□□□□ -0.09
PDXDC1-216ENST00000569715 ZNF335Q9H4Z2 1342 aaPredicted RBP14.49□□□□□ -0.09
PDXDC1-216ENST00000569715 ZNF521Q96K83 1311 aa14.48□□□□□ -0.09
PDXDC1-216ENST00000569715 USP54Q70EL1 1684 aa14.48□□□□□ -0.09
PDXDC1-216ENST00000569715 PAK3O75914 559 aaPredicted RBP14.48□□□□□ -0.09
PDXDC1-216ENST00000569715 RUNDC1Q96C34 613 aa14.47□□□□□ -0.09
PDXDC1-216ENST00000569715 MST1RQ04912 1400 aa14.47□□□□□ -0.09
PDXDC1-216ENST00000569715 RRP7AQ9Y3A4 280 aaKnown RBP14.47□□□□□ -0.09
PDXDC1-216ENST00000569715 XPCQ01831 940 aaPredicted RBP14.47□□□□□ -0.09
PDXDC1-216ENST00000569715 LRRC7Q96NW7 1537 aa14.46□□□□□ -0.09
PDXDC1-216ENST00000569715 FOXO3O43524 673 aa14.46□□□□□ -0.1
PDXDC1-216ENST00000569715 NLRP6P59044 892 aa14.46□□□□□ -0.1
PDXDC1-216ENST00000569715 PDE3BQ13370 1112 aa14.46□□□□□ -0.1
PDXDC1-216ENST00000569715 FKBP8Q14318 412 aa14.46□□□□□ -0.1
PDXDC1-216ENST00000569715 DCCP43146 1447 aa14.45□□□□□ -0.1
PDXDC1-216ENST00000569715 KIF1AQ12756 1690 aa14.45□□□□□ -0.1
PDXDC1-216ENST00000569715 TCP11L2Q8N4U5 519 aa14.45□□□□□ -0.1
PDXDC1-216ENST00000569715 ABTB2Q8N961 1025 aa14.45□□□□□ -0.1
PDXDC1-216ENST00000569715 NCOA3Q9Y6Q9 1424 aa14.45□□□□□ -0.1
PDXDC1-216ENST00000569715 ATF3P18847 181 aa14.45□□□□□ -0.1
PDXDC1-216ENST00000569715 PSME1Q06323 249 aa14.45□□□□□ -0.1
PDXDC1-216ENST00000569715 NEUROD2Q15784 382 aa14.45□□□□□ -0.1
PDXDC1-216ENST00000569715 DMRT2Q9Y5R5 561 aa14.45□□□□□ -0.1
PDXDC1-216ENST00000569715 TRPM3Q9HCF6 1732 aaPredicted RBP14.44□□□□□ -0.1
PDXDC1-216ENST00000569715 IL13P35225 146 aa14.44□□□□□ -0.1
PDXDC1-216ENST00000569715 PLEKHF1Q96S99 279 aa14.44□□□□□ -0.1
PDXDC1-216ENST00000569715 IRX6P78412 446 aaPredicted RBP14.44□□□□□ -0.1
PDXDC1-216ENST00000569715 MAP3K19Q56UN5 1328 aa14.43□□□□□ -0.1
PDXDC1-216ENST00000569715 PELP1Q8IZL8 1130 aaKnown RBP14.43□□□□□ -0.1
PDXDC1-216ENST00000569715 SPINK5Q9NQ38 1064 aaPredicted RBP14.43□□□□□ -0.1
PDXDC1-216ENST00000569715 MSH6P52701 1360 aa14.42□□□□□ -0.1
PDXDC1-216ENST00000569715 NEFLP07196 543 aa14.42□□□□□ -0.1
PDXDC1-216ENST00000569715 HMOX1P09601 288 aa14.42□□□□□ -0.1
PDXDC1-216ENST00000569715 HSP90AB2PQ58FF8 381 aa14.42□□□□□ -0.1
PDXDC1-216ENST00000569715 DDX17Q92841 729 aaKnown RBP14.42□□□□□ -0.1
PDXDC1-216ENST00000569715 GOLGA2Q08379 1002 aa14.41□□□□□ -0.1
PDXDC1-216ENST00000569715 WWC1Q8IX03 1113 aa14.41□□□□□ -0.1
PDXDC1-216ENST00000569715 RSPH6AQ9H0K4 717 aa14.41□□□□□ -0.1
PDXDC1-216ENST00000569715 EIF4A2Q14240 407 aaKnown RBP14.41□□□□□ -0.1
PDXDC1-216ENST00000569715 LTN1O94822 1766 aa14.4□□□□□ -0.1
PDXDC1-216ENST00000569715 CADPS2Q86UW7 1296 aa14.4□□□□□ -0.1
PDXDC1-216ENST00000569715 RGPD1P0DJD0 1748 aa14.4□□□□□ -0.1
PDXDC1-216ENST00000569715 DUSP27Q5VZP5 1158 aa14.39□□□□□ -0.11
PDXDC1-216ENST00000569715 NFAT5O94916 1531 aa14.39□□□□□ -0.11
PDXDC1-216ENST00000569715 PRKAR2BP31323 418 aa14.39□□□□□ -0.11
PDXDC1-216ENST00000569715 PHF23Q9BUL5 403 aaPredicted RBP14.39□□□□□ -0.11
PDXDC1-216ENST00000569715 SBNO1A3KN83 1393 aa14.39□□□□□ -0.11
PDXDC1-216ENST00000569715 SLFN5Q08AF3 891 aa14.39□□□□□ -0.11
PDXDC1-216ENST00000569715 KRT28Q7Z3Y7 464 aa14.38□□□□□ -0.11
PDXDC1-216ENST00000569715 FLT4P35916 1363 aa14.38□□□□□ -0.11
PDXDC1-216ENST00000569715 MAPK8IP3Q9UPT6 1336 aa14.38□□□□□ -0.11
PDXDC1-216ENST00000569715 PLEKHG5O94827 1062 aa14.38□□□□□ -0.11
PDXDC1-216ENST00000569715 FCHSD2O94868 740 aa14.38□□□□□ -0.11
PDXDC1-216ENST00000569715 ALS2Q96Q42 1657 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms