RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 POLR3GLQ9BT43 218 aa17.91■□□□□ 0.46
CDT1-203ENST00000569140 ALS2Q96Q42 1657 aa17.9■□□□□ 0.46
CDT1-203ENST00000569140 USP6P35125 1406 aa17.89■□□□□ 0.45
CDT1-203ENST00000569140 CDCA8Q53HL2 280 aa17.88■□□□□ 0.45
CDT1-203ENST00000569140 HDGFL2Q7Z4V5 671 aaPredicted RBP17.88■□□□□ 0.45
CDT1-203ENST00000569140 ABTB2Q8N961 1025 aa17.88■□□□□ 0.45
CDT1-203ENST00000569140 AKAP12Q02952 1782 aa17.88■□□□□ 0.45
CDT1-203ENST00000569140 KTN1Q86UP2 1357 aaKnown RBP17.88■□□□□ 0.45
CDT1-203ENST00000569140 NGLY1Q96IV0 654 aa17.87■□□□□ 0.45
CDT1-203ENST00000569140 SLC12A5Q9H2X9 1139 aa17.87■□□□□ 0.45
CDT1-203ENST00000569140 ABCA3Q99758 1704 aa17.86■□□□□ 0.45
CDT1-203ENST00000569140 AFF2P51816 1311 aa17.86■□□□□ 0.45
CDT1-203ENST00000569140 PUS7Q96PZ0 661 aaKnown RBP17.85■□□□□ 0.45
CDT1-203ENST00000569140 ZNF692Q9BU19 519 aaPredicted RBP17.85■□□□□ 0.45
CDT1-203ENST00000569140 TERF2IPQ9NYB0 399 aa17.85■□□□□ 0.45
CDT1-203ENST00000569140 MARF1Q9Y4F3 1742 aaKnown RBP17.85■□□□□ 0.45
CDT1-203ENST00000569140 MON2Q7Z3U7 1717 aa17.84■□□□□ 0.45
CDT1-203ENST00000569140 BRD4O60885 1362 aaPredicted RBP17.83■□□□□ 0.45
CDT1-203ENST00000569140 NINLQ9Y2I6 1382 aa17.83■□□□□ 0.45
CDT1-203ENST00000569140 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.83■□□□□ 0.44
CDT1-203ENST00000569140 CPSF1Q10570 1443 aaKnown RBP17.82■□□□□ 0.44
CDT1-203ENST00000569140 A0A1W2PP64 1363 aa17.82■□□□□ 0.44
CDT1-203ENST00000569140 ZNF772Q68DY9 489 aaPredicted RBP17.82■□□□□ 0.44
CDT1-203ENST00000569140 RGS17Q9UGC6 210 aaPredicted RBP17.82■□□□□ 0.44
CDT1-203ENST00000569140 PHRF1Q9P1Y6 1649 aaKnown RBP17.82■□□□□ 0.44
CDT1-203ENST00000569140 NRKQ7Z2Y5 1582 aa17.82■□□□□ 0.44
CDT1-203ENST00000569140 TTC21BQ7Z4L5 1316 aa17.81■□□□□ 0.44
CDT1-203ENST00000569140 NLRP6P59044 892 aa17.81■□□□□ 0.44
CDT1-203ENST00000569140 NLRP13Q86W25 1043 aa17.81■□□□□ 0.44
CDT1-203ENST00000569140 CD163L1Q9NR16 1453 aa17.81■□□□□ 0.44
CDT1-203ENST00000569140 ZBTB7CA1YPR0 619 aa17.8■□□□□ 0.44
CDT1-203ENST00000569140 USP21Q9UK80 565 aa17.8■□□□□ 0.44
CDT1-203ENST00000569140 CRYBG1Q9Y4K1 1723 aa17.8■□□□□ 0.44
CDT1-203ENST00000569140 PIK3C2AO00443 1686 aa17.8■□□□□ 0.44
CDT1-203ENST00000569140 TTC21AQ8NDW8 1320 aa17.79■□□□□ 0.44
CDT1-203ENST00000569140 POTEAQ6S8J7 498 aa17.79■□□□□ 0.44
CDT1-203ENST00000569140 SOX12O15370 315 aa17.78■□□□□ 0.44
CDT1-203ENST00000569140 ZC3H6P61129 1189 aaKnown RBP17.78■□□□□ 0.44
CDT1-203ENST00000569140 EDC4Q6P2E9 1401 aaKnown RBP17.78■□□□□ 0.44
CDT1-203ENST00000569140 SSH2Q76I76 1423 aa17.78■□□□□ 0.44
CDT1-203ENST00000569140 ANKRD36BQ8N2N9 1353 aa17.78■□□□□ 0.44
CDT1-203ENST00000569140 MYOM1P52179 1685 aa17.77■□□□□ 0.44
CDT1-203ENST00000569140 ILDR2Q71H61 639 aa17.77■□□□□ 0.44
CDT1-203ENST00000569140 PRDM11Q9NQV5 511 aa17.77■□□□□ 0.44
CDT1-203ENST00000569140 PLCH1Q4KWH8 1693 aa17.77■□□□□ 0.43
CDT1-203ENST00000569140 NME9Q86XW9 330 aa17.76■□□□□ 0.43
CDT1-203ENST00000569140 KIAA0232Q92628 1395 aa17.75■□□□□ 0.43
CDT1-203ENST00000569140 USP19O94966 1318 aa17.74■□□□□ 0.43
CDT1-203ENST00000569140 COL14A1Q05707 1796 aaKnown RBP17.74■□□□□ 0.43
CDT1-203ENST00000569140 FAM83GA6ND36 823 aa17.74■□□□□ 0.43
CDT1-203ENST00000569140 CHRNA2Q15822 529 aa17.74■□□□□ 0.43
CDT1-203ENST00000569140 QTRT2Q9H974 415 aaKnown RBP17.74■□□□□ 0.43
CDT1-203ENST00000569140 ZRANB1Q9UGI0 708 aa17.74■□□□□ 0.43
CDT1-203ENST00000569140 FNBP4Q8N3X1 1017 aaPredicted RBP17.73■□□□□ 0.43
CDT1-203ENST00000569140 TRPC5Q9UL62 973 aaPredicted RBP17.73■□□□□ 0.43
CDT1-203ENST00000569140 CCDC9Q9Y3X0 531 aaKnown RBP17.73■□□□□ 0.43
CDT1-203ENST00000569140 GCP02774 474 aa17.72■□□□□ 0.43
CDT1-203ENST00000569140 BTG4Q9NY30 223 aa17.72■□□□□ 0.43
CDT1-203ENST00000569140 SLIT3O75094 1523 aa17.72■□□□□ 0.43
CDT1-203ENST00000569140 RXRBP28702 533 aa17.71■□□□□ 0.43
CDT1-203ENST00000569140 UNC5CLQ8IV45 518 aa17.71■□□□□ 0.43
CDT1-203ENST00000569140 SLIT2O94813 1529 aa17.71■□□□□ 0.43
CDT1-203ENST00000569140 NSD3Q9BZ95 1437 aa17.71■□□□□ 0.43
CDT1-203ENST00000569140 BCL9LQ86UU0 1499 aa17.7■□□□□ 0.42
CDT1-203ENST00000569140 NWD2Q9ULI1 1742 aa17.7■□□□□ 0.42
CDT1-203ENST00000569140 C11orf95C9JLR9 678 aaPredicted RBP17.7■□□□□ 0.42
CDT1-203ENST00000569140 KCNH5Q8NCM2 988 aa17.7■□□□□ 0.42
CDT1-203ENST00000569140 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.69■□□□□ 0.42
CDT1-203ENST00000569140 COG3Q96JB2 828 aa17.69■□□□□ 0.42
CDT1-203ENST00000569140 STRN4Q9NRL3 753 aa17.69■□□□□ 0.42
CDT1-203ENST00000569140 KIF7Q2M1P5 1343 aa17.69■□□□□ 0.42
CDT1-203ENST00000569140 KIF20BQ96Q89 1820 aa17.68■□□□□ 0.42
CDT1-203ENST00000569140 ATRNO75882 1429 aa17.68■□□□□ 0.42
CDT1-203ENST00000569140 USP31Q70CQ4 1352 aa17.67■□□□□ 0.42
CDT1-203ENST00000569140 RBM6P78332 1123 aaKnown RBP17.67■□□□□ 0.42
CDT1-203ENST00000569140 GGNBP2Q9H3C7 697 aa17.67■□□□□ 0.42
CDT1-203ENST00000569140 NRAPQ86VF7 1730 aa17.67■□□□□ 0.42
CDT1-203ENST00000569140 CPDO75976 1380 aa17.66■□□□□ 0.42
CDT1-203ENST00000569140 EVA1CP58658 441 aa17.66■□□□□ 0.42
CDT1-203ENST00000569140 USP54Q70EL1 1684 aa17.66■□□□□ 0.42
CDT1-203ENST00000569140 OVOS2A0A0J9YW53 1432 aa17.65■□□□□ 0.42
CDT1-203ENST00000569140 OVOS2Q6IE36 1432 aa17.65■□□□□ 0.42
CDT1-203ENST00000569140 ZEB1P37275 1124 aaPredicted RBP17.65■□□□□ 0.42
CDT1-203ENST00000569140 CARD14Q9BXL6 1004 aa17.65■□□□□ 0.42
CDT1-203ENST00000569140 PANK3Q9H999 370 aa17.65■□□□□ 0.42
CDT1-203ENST00000569140 NFAT5O94916 1531 aa17.64■□□□□ 0.41
CDT1-203ENST00000569140 A0A0G2JS52 829 aa17.64■□□□□ 0.41
CDT1-203ENST00000569140 MYT1Q01538 1121 aa17.64■□□□□ 0.41
CDT1-203ENST00000569140 GJD4Q96KN9 370 aaPredicted RBP17.64■□□□□ 0.41
CDT1-203ENST00000569140 VPS72Q15906 364 aa17.63■□□□□ 0.41
CDT1-203ENST00000569140 CGNL1Q0VF96 1302 aa17.63■□□□□ 0.41
CDT1-203ENST00000569140 LMO7Q8WWI1 1683 aa17.62■□□□□ 0.41
CDT1-203ENST00000569140 FYB1O15117 783 aa17.62■□□□□ 0.41
CDT1-203ENST00000569140 CCDC7Q96M83 1385 aa17.62■□□□□ 0.41
CDT1-203ENST00000569140 RGS12O14924 1447 aa17.62■□□□□ 0.41
CDT1-203ENST00000569140 CAMTA1Q9Y6Y1 1673 aa17.61■□□□□ 0.41
CDT1-203ENST00000569140 LTN1O94822 1766 aa17.61■□□□□ 0.41
CDT1-203ENST00000569140 ARHGEF25Q86VW2 580 aa17.61■□□□□ 0.41
CDT1-203ENST00000569140 USP35Q9P2H5 1018 aa17.61■□□□□ 0.41
CDT1-203ENST00000569140 GLI3P10071 1580 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms