RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 SNRKQ9NRH2 765 aa7.26□□□□□ -1.25
HMGB1P6-201ENST00000569046 GFRA3O60609 400 aa7.25□□□□□ -1.25
HMGB1P6-201ENST00000569046 WNT7BP56706 349 aa7.25□□□□□ -1.25
HMGB1P6-201ENST00000569046 RC3H1Q5TC82 1133 aaKnown RBP7.25□□□□□ -1.25
HMGB1P6-201ENST00000569046 ZNF511Q8NB15 262 aa7.25□□□□□ -1.25
HMGB1P6-201ENST00000569046 GJD4Q96KN9 370 aaPredicted RBP7.25□□□□□ -1.25
HMGB1P6-201ENST00000569046 IRX2Q9BZI1 471 aaPredicted RBP7.25□□□□□ -1.25
HMGB1P6-201ENST00000569046 PDZRN3Q9UPQ7 1066 aa7.25□□□□□ -1.25
HMGB1P6-201ENST00000569046 WNT7AO00755 349 aa7.24□□□□□ -1.25
HMGB1P6-201ENST00000569046 PRR20EP86478 221 aa7.24□□□□□ -1.25
HMGB1P6-201ENST00000569046 PRR20CP86479 221 aa7.24□□□□□ -1.25
HMGB1P6-201ENST00000569046 PRR20DP86480 221 aa7.24□□□□□ -1.25
HMGB1P6-201ENST00000569046 PRR20BP86481 221 aa7.24□□□□□ -1.25
HMGB1P6-201ENST00000569046 PRR20AP86496 221 aa7.24□□□□□ -1.25
HMGB1P6-201ENST00000569046 MTMR14Q8NCE2 650 aa7.24□□□□□ -1.25
HMGB1P6-201ENST00000569046 BANK1Q8NDB2 785 aa7.24□□□□□ -1.25
HMGB1P6-201ENST00000569046 FOXJ1Q92949 421 aa7.24□□□□□ -1.25
HMGB1P6-201ENST00000569046 MRGPRX2Q96LB1 330 aa7.24□□□□□ -1.25
HMGB1P6-201ENST00000569046 C4orf48Q5BLP8 95 aa7.23□□□□□ -1.25
HMGB1P6-201ENST00000569046 SIAH2O43255 324 aa7.21□□□□□ -1.26
HMGB1P6-201ENST00000569046 GPR37L1O60883 481 aa7.21□□□□□ -1.26
HMGB1P6-201ENST00000569046 TOR4AQ9NXH8 423 aa7.21□□□□□ -1.26
HMGB1P6-201ENST00000569046 FKBPLQ9UIM3 349 aa7.21□□□□□ -1.26
HMGB1P6-201ENST00000569046 NRG2O14511 850 aaPredicted RBP7.2□□□□□ -1.26
HMGB1P6-201ENST00000569046 SH3BP5LQ7L8J4 393 aa7.2□□□□□ -1.26
HMGB1P6-201ENST00000569046 SH3RF1Q7Z6J0 888 aa7.2□□□□□ -1.26
HMGB1P6-201ENST00000569046 EHBP1Q8NDI1 1231 aa7.2□□□□□ -1.26
HMGB1P6-201ENST00000569046 ARMC2Q8NEN0 867 aa7.2□□□□□ -1.26
HMGB1P6-201ENST00000569046 OCSTAMPQ9BR26 566 aa7.2□□□□□ -1.26
HMGB1P6-201ENST00000569046 NBPF14Q5TI25 921 aa7.19□□□□□ -1.26
HMGB1P6-201ENST00000569046 J3QL48 77 aa7.18□□□□□ -1.26
HMGB1P6-201ENST00000569046 SOCS7O14512 581 aa7.18□□□□□ -1.26
HMGB1P6-201ENST00000569046 LCE2BO14633 110 aa7.18□□□□□ -1.26
HMGB1P6-201ENST00000569046 VARSP26640 1264 aaKnown RBP7.18□□□□□ -1.26
HMGB1P6-201ENST00000569046 MCM6Q14566 821 aa7.18□□□□□ -1.26
HMGB1P6-201ENST00000569046 AGERQ15109 404 aa7.18□□□□□ -1.26
HMGB1P6-201ENST00000569046 PDXDC2PQ6P474 469 aa7.18□□□□□ -1.26
HMGB1P6-201ENST00000569046 CYP4X1Q8N118 509 aa7.18□□□□□ -1.26
HMGB1P6-201ENST00000569046 GPKOWQ92917 476 aaPredicted RBP eCLIP7.18□□□□□ -1.26
HMGB1P6-201ENST00000569046 SMPD1P17405 629 aa7.17□□□□□ -1.26
HMGB1P6-201ENST00000569046 LAPTM4AQ15012 233 aa7.17□□□□□ -1.26
HMGB1P6-201ENST00000569046 BPHLQ86WA6 291 aaPredicted RBP7.17□□□□□ -1.26
HMGB1P6-201ENST00000569046 SNIP1Q8TAD8 396 aaKnown RBP7.17□□□□□ -1.26
HMGB1P6-201ENST00000569046 TLL2Q9Y6L7 1015 aa7.17□□□□□ -1.26
HMGB1P6-201ENST00000569046 MAGEB6P1A0A0J9YX57 407 aa7.16□□□□□ -1.26
HMGB1P6-201ENST00000569046 TTC24A2A3L6 582 aaPredicted RBP7.16□□□□□ -1.26
HMGB1P6-201ENST00000569046 C1QTNF2Q9BXJ5 285 aa7.16□□□□□ -1.26
HMGB1P6-201ENST00000569046 CARD14Q9BXL6 1004 aa7.16□□□□□ -1.26
HMGB1P6-201ENST00000569046 ZC3H4Q9UPT8 1303 aaKnown RBP7.16□□□□□ -1.26
HMGB1P6-201ENST00000569046 FAM187AA6NFU0 413 aa7.15□□□□□ -1.26
HMGB1P6-201ENST00000569046 ALDH1A1P00352 501 aa7.15□□□□□ -1.26
HMGB1P6-201ENST00000569046 ERFEQ4G0M1 354 aa7.15□□□□□ -1.26
HMGB1P6-201ENST00000569046 TBC1D2BQ9UPU7 963 aa7.15□□□□□ -1.26
HMGB1P6-201ENST00000569046 Q6ZNB5 142 aa7.14□□□□□ -1.27
HMGB1P6-201ENST00000569046 FAM174AQ8TBP5 190 aa7.14□□□□□ -1.27
HMGB1P6-201ENST00000569046 ARHGAP9Q9BRR9 750 aa7.14□□□□□ -1.27
HMGB1P6-201ENST00000569046 NDUFB9Q9Y6M9 179 aa7.14□□□□□ -1.27
HMGB1P6-201ENST00000569046 MPNDQ8N594 471 aa7.13□□□□□ -1.27
HMGB1P6-201ENST00000569046 ADAM32Q8TC27 787 aa7.13□□□□□ -1.27
HMGB1P6-201ENST00000569046 DGAT1O75907 488 aa7.12□□□□□ -1.27
HMGB1P6-201ENST00000569046 FBXO45P0C2W1 286 aa7.12□□□□□ -1.27
HMGB1P6-201ENST00000569046 PTK2Q05397 1052 aa7.12□□□□□ -1.27
HMGB1P6-201ENST00000569046 ARID5BQ14865 1188 aa7.12□□□□□ -1.27
HMGB1P6-201ENST00000569046 PKDCCQ504Y2 493 aa7.12□□□□□ -1.27
HMGB1P6-201ENST00000569046 TRMT44Q8IYL2 757 aaKnown RBP7.12□□□□□ -1.27
HMGB1P6-201ENST00000569046 PNMA1Q8ND90 353 aa7.12□□□□□ -1.27
HMGB1P6-201ENST00000569046 HPS1Q92902 700 aa7.12□□□□□ -1.27
HMGB1P6-201ENST00000569046 CDK15Q96Q40 435 aa7.12□□□□□ -1.27
HMGB1P6-201ENST00000569046 GDPD2Q9HCC8 539 aa7.12□□□□□ -1.27
HMGB1P6-201ENST00000569046 GPSM3Q9Y4H4 160 aa7.12□□□□□ -1.27
HMGB1P6-201ENST00000569046 GRM5P41594 1212 aa7.11□□□□□ -1.27
HMGB1P6-201ENST00000569046 MYT1Q01538 1121 aa7.11□□□□□ -1.27
HMGB1P6-201ENST00000569046 IRF5Q13568 498 aa7.11□□□□□ -1.27
HMGB1P6-201ENST00000569046 ZBTB33Q86T24 672 aa7.11□□□□□ -1.27
HMGB1P6-201ENST00000569046 POM121Q96HA1 1249 aa7.11□□□□□ -1.27
HMGB1P6-201ENST00000569046 ZBBXA8MT70 800 aa7.1□□□□□ -1.27
HMGB1P6-201ENST00000569046 AVPP01185 164 aa7.1□□□□□ -1.27
HMGB1P6-201ENST00000569046 COG6Q9Y2V7 657 aa7.1□□□□□ -1.27
HMGB1P6-201ENST00000569046 APBB1O00213 710 aa7.09□□□□□ -1.27
HMGB1P6-201ENST00000569046 ADH1CP00326 375 aa7.09□□□□□ -1.27
HMGB1P6-201ENST00000569046 NR3C2P08235 984 aa7.09□□□□□ -1.27
HMGB1P6-201ENST00000569046 FLIIQ13045 1269 aa7.09□□□□□ -1.27
HMGB1P6-201ENST00000569046 MAP4K5Q9Y4K4 846 aa7.09□□□□□ -1.27
HMGB1P6-201ENST00000569046 WASF2Q9Y6W5 498 aa7.09□□□□□ -1.27
HMGB1P6-201ENST00000569046 ST8SIA5O15466 376 aa7.08□□□□□ -1.28
HMGB1P6-201ENST00000569046 ABL2P42684 1182 aa7.08□□□□□ -1.28
HMGB1P6-201ENST00000569046 NR1H3Q13133 447 aa7.08□□□□□ -1.28
HMGB1P6-201ENST00000569046 NNTQ13423 1086 aa7.08□□□□□ -1.28
HMGB1P6-201ENST00000569046 TRAF7Q6Q0C0 670 aa7.08□□□□□ -1.28
HMGB1P6-201ENST00000569046 VASH1Q7L8A9 365 aaPredicted RBP7.08□□□□□ -1.28
HMGB1P6-201ENST00000569046 SLC10A4Q96EP9 437 aa7.07□□□□□ -1.28
HMGB1P6-201ENST00000569046 AAASQ9NRG9 546 aa7.07□□□□□ -1.28
HMGB1P6-201ENST00000569046 NISCHQ9Y2I1 1504 aa7.06□□□□□ -1.28
HMGB1P6-201ENST00000569046 FSHRP23945 695 aa7.06□□□□□ -1.28
HMGB1P6-201ENST00000569046 KCTD15Q96SI1 283 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P6-201ENST00000569046 KLF16Q9BXK1 252 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P6-201ENST00000569046 DACH1Q9UI36 760 aa7.06□□□□□ -1.28
HMGB1P6-201ENST00000569046 UBTFP17480 764 aaKnown RBP7.05□□□□□ -1.28
HMGB1P6-201ENST00000569046 VAC14Q08AM6 782 aa7.05□□□□□ -1.28
HMGB1P6-201ENST00000569046 NR5A1Q13285 461 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms