RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 ACIN1Q9UKV3 1341 aaKnown RBP18.54■□□□□ 0.56
SNX29-207ENST00000568949 THSD7AQ9UPZ6 1657 aa18.54■□□□□ 0.56
SNX29-207ENST00000568949 R3HDM1Q15032 1099 aaKnown RBP18.52■□□□□ 0.56
SNX29-207ENST00000568949 TNS1Q9HBL0 1735 aaKnown RBP18.52■□□□□ 0.55
SNX29-207ENST00000568949 FAM182BQ5T319 152 aa18.51■□□□□ 0.55
SNX29-207ENST00000568949 CRYBG1Q9Y4K1 1723 aa18.51■□□□□ 0.55
SNX29-207ENST00000568949 TULP4Q9NRJ4 1543 aa18.5■□□□□ 0.55
SNX29-207ENST00000568949 ADGRB1O14514 1584 aa18.5■□□□□ 0.55
SNX29-207ENST00000568949 PRR36Q9H6K5 1346 aa18.49■□□□□ 0.55
SNX29-207ENST00000568949 PRDM11Q9NQV5 511 aa18.49■□□□□ 0.55
SNX29-207ENST00000568949 EZH2Q15910 746 aaKnown RBP18.48■□□□□ 0.55
SNX29-207ENST00000568949 FAM196AQ6ZSG2 479 aa18.48■□□□□ 0.55
SNX29-207ENST00000568949 CAMKK2Q96RR4 588 aa18.48■□□□□ 0.55
SNX29-207ENST00000568949 HIRIP3Q9BW71 556 aaPredicted RBP18.48■□□□□ 0.55
SNX29-207ENST00000568949 SPATA31A1Q5TZJ5 1347 aa18.48■□□□□ 0.55
SNX29-207ENST00000568949 PARD3Q8TEW0 1356 aa18.47■□□□□ 0.55
SNX29-207ENST00000568949 WASLO00401 505 aaPredicted RBP18.47■□□□□ 0.55
SNX29-207ENST00000568949 NGDNQ8NEJ9 315 aaKnown RBP18.47■□□□□ 0.55
SNX29-207ENST00000568949 TRAK1Q9UPV9 953 aa18.47■□□□□ 0.55
SNX29-207ENST00000568949 MINK1Q8N4C8 1332 aaPredicted RBP18.47■□□□□ 0.55
SNX29-207ENST00000568949 PAK3O75914 559 aaPredicted RBP18.45■□□□□ 0.54
SNX29-207ENST00000568949 TRIM37O94972 964 aa18.45■□□□□ 0.54
SNX29-207ENST00000568949 KIAA0232Q92628 1395 aa18.43■□□□□ 0.54
SNX29-207ENST00000568949 APBA3O96018 575 aa18.42■□□□□ 0.54
SNX29-207ENST00000568949 BARGINQ6ZT62 677 aa18.41■□□□□ 0.54
SNX29-207ENST00000568949 STRN4Q9NRL3 753 aa18.41■□□□□ 0.54
SNX29-207ENST00000568949 ITSN1Q15811 1721 aa18.4■□□□□ 0.54
SNX29-207ENST00000568949 ATP7BP35670 1465 aa18.4■□□□□ 0.54
SNX29-207ENST00000568949 CHRNA2Q15822 529 aa18.4■□□□□ 0.54
SNX29-207ENST00000568949 STAC3Q96MF2 364 aa18.4■□□□□ 0.54
SNX29-207ENST00000568949 PHRF1Q9P1Y6 1649 aaKnown RBP18.4■□□□□ 0.54
SNX29-207ENST00000568949 RREB1Q92766 1687 aa18.39■□□□□ 0.53
SNX29-207ENST00000568949 PDE3BQ13370 1112 aa18.38■□□□□ 0.53
SNX29-207ENST00000568949 NBPF8Q3BBV2 869 aa18.38■□□□□ 0.53
SNX29-207ENST00000568949 NBPF14Q5TI25 921 aa18.38■□□□□ 0.53
SNX29-207ENST00000568949 NUDT16Q96DE0 195 aaKnown RBP18.38■□□□□ 0.53
SNX29-207ENST00000568949 EVA1CP58658 441 aa18.37■□□□□ 0.53
SNX29-207ENST00000568949 ZC3H6P61129 1189 aaKnown RBP18.37■□□□□ 0.53
SNX29-207ENST00000568949 SSH2Q76I76 1423 aa18.37■□□□□ 0.53
SNX29-207ENST00000568949 NUP188Q5SRE5 1749 aa18.36■□□□□ 0.53
SNX29-207ENST00000568949 KDM2AQ9Y2K7 1162 aa18.36■□□□□ 0.53
SNX29-207ENST00000568949 POLR3AO14802 1390 aaPredicted RBP18.35■□□□□ 0.53
SNX29-207ENST00000568949 YY1P25490 414 aa18.35■□□□□ 0.53
SNX29-207ENST00000568949 DCAF11Q8TEB1 546 aa18.35■□□□□ 0.53
SNX29-207ENST00000568949 USP35Q9P2H5 1018 aa18.35■□□□□ 0.53
SNX29-207ENST00000568949 TCP11L2Q8N4U5 519 aa18.34■□□□□ 0.53
SNX29-207ENST00000568949 ARHGEF28Q8N1W1 1705 aaKnown RBP18.34■□□□□ 0.53
SNX29-207ENST00000568949 CPDO75976 1380 aa18.33■□□□□ 0.53
SNX29-207ENST00000568949 C11orf95C9JLR9 678 aaPredicted RBP18.33■□□□□ 0.52
SNX29-207ENST00000568949 NUTM2GQ5VZR2 741 aa18.33■□□□□ 0.52
SNX29-207ENST00000568949 THRAP3Q9Y2W1 955 aaKnown RBP18.33■□□□□ 0.52
SNX29-207ENST00000568949 CAMTA1Q9Y6Y1 1673 aa18.32■□□□□ 0.52
SNX29-207ENST00000568949 LARP1Q6PKG0 1096 aaKnown RBP18.32■□□□□ 0.52
SNX29-207ENST00000568949 SPON1Q9HCB6 807 aa18.32■□□□□ 0.52
SNX29-207ENST00000568949 ACEP12821 1306 aa18.31■□□□□ 0.52
SNX29-207ENST00000568949 NRKQ7Z2Y5 1582 aa18.31■□□□□ 0.52
SNX29-207ENST00000568949 PLEKHG3A1L390 1219 aa18.31■□□□□ 0.52
SNX29-207ENST00000568949 CDK19Q9BWU1 502 aa18.31■□□□□ 0.52
SNX29-207ENST00000568949 CCDC61Q9Y6R9 512 aa18.31■□□□□ 0.52
SNX29-207ENST00000568949 LMO7Q8WWI1 1683 aa18.31■□□□□ 0.52
SNX29-207ENST00000568949 TOPAZ1Q8N9V7 1692 aa18.3■□□□□ 0.52
SNX29-207ENST00000568949 USP19O94966 1318 aa18.29■□□□□ 0.52
SNX29-207ENST00000568949 KCNQ2O43526 872 aa18.29■□□□□ 0.52
SNX29-207ENST00000568949 ABTB2Q8N961 1025 aa18.29■□□□□ 0.52
SNX29-207ENST00000568949 PPP1R1BQ9UD71 204 aaPredicted RBP18.29■□□□□ 0.52
SNX29-207ENST00000568949 RAB3GAP2Q9H2M9 1393 aa18.29■□□□□ 0.52
SNX29-207ENST00000568949 NINLQ9Y2I6 1382 aa18.29■□□□□ 0.52
SNX29-207ENST00000568949 DCAF8L1A6NGE4 600 aa18.28■□□□□ 0.52
SNX29-207ENST00000568949 PARP4Q9UKK3 1724 aaKnown RBP18.28■□□□□ 0.52
SNX29-207ENST00000568949 NLRP13Q86W25 1043 aa18.26■□□□□ 0.51
SNX29-207ENST00000568949 RGPD3A6NKT7 1758 aaPredicted RBP18.25■□□□□ 0.51
SNX29-207ENST00000568949 RGPD4Q7Z3J3 1758 aa18.25■□□□□ 0.51
SNX29-207ENST00000568949 GCP02774 474 aa18.25■□□□□ 0.51
SNX29-207ENST00000568949 COL5A2P05997 1499 aaPredicted RBP18.25■□□□□ 0.51
SNX29-207ENST00000568949 PLSCR1O15162 318 aa18.24■□□□□ 0.51
SNX29-207ENST00000568949 OVOS2A0A0G2JMS6 1433 aa18.23■□□□□ 0.51
SNX29-207ENST00000568949 OVOS2A0A0J9YW53 1432 aa18.23■□□□□ 0.51
SNX29-207ENST00000568949 OVOS2Q6IE36 1432 aa18.23■□□□□ 0.51
SNX29-207ENST00000568949 PEAK1Q9H792 1746 aa18.23■□□□□ 0.51
SNX29-207ENST00000568949 CRB1P82279 1406 aa18.23■□□□□ 0.51
SNX29-207ENST00000568949 BRD4O60885 1362 aaPredicted RBP18.22■□□□□ 0.51
SNX29-207ENST00000568949 SBF2Q86WG5 1849 aa18.21■□□□□ 0.51
SNX29-207ENST00000568949 KIAA1210Q9ULL0 1709 aa18.2■□□□□ 0.5
SNX29-207ENST00000568949 AATKQ6ZMQ8 1374 aa18.19■□□□□ 0.5
SNX29-207ENST00000568949 PPIP5K1Q6PFW1 1433 aa18.18■□□□□ 0.5
SNX29-207ENST00000568949 CASZ1Q86V15 1759 aa18.18■□□□□ 0.5
SNX29-207ENST00000568949 DDB1Q16531 1140 aa18.18■□□□□ 0.5
SNX29-207ENST00000568949 BCL11BQ9C0K0 894 aaPredicted RBP18.18■□□□□ 0.5
SNX29-207ENST00000568949 LRRC37A3O60309 1634 aa18.18■□□□□ 0.5
SNX29-207ENST00000568949 ANO8Q9HCE9 1232 aaPredicted RBP18.17■□□□□ 0.5
SNX29-207ENST00000568949 BCL9O00512 1426 aa18.16■□□□□ 0.5
SNX29-207ENST00000568949 SRPK2P78362 688 aaKnown RBP18.16■□□□□ 0.5
SNX29-207ENST00000568949 SLIT3O75094 1523 aa18.15■□□□□ 0.5
SNX29-207ENST00000568949 CDCA7Q9BWT1 371 aaPredicted RBP18.15■□□□□ 0.5
SNX29-207ENST00000568949 NLRP6P59044 892 aa18.14■□□□□ 0.49
SNX29-207ENST00000568949 TOM1L2Q6ZVM7 507 aa18.14■□□□□ 0.49
SNX29-207ENST00000568949 USP6P35125 1406 aa18.14■□□□□ 0.49
SNX29-207ENST00000568949 COL18A1P39060 1754 aa18.13■□□□□ 0.49
SNX29-207ENST00000568949 ZBTB7CA1YPR0 619 aa18.13■□□□□ 0.49
SNX29-207ENST00000568949 PROM2Q8N271 834 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms