RNA–Protein interactions for RNA: ENST00000568230.5

KNOP1-205, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KNOP1, Length 1,311 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-205ENST00000568230 SLIT2O94813 1529 aa24.33■■□□□ 1.49
KNOP1-205ENST00000568230 RXRBP28702 533 aa24.33■■□□□ 1.48
KNOP1-205ENST00000568230 QTRT2Q9H974 415 aaKnown RBP24.32■■□□□ 1.48
KNOP1-205ENST00000568230 ATRNO75882 1429 aa24.31■■□□□ 1.48
KNOP1-205ENST00000568230 HAP1P54257 671 aaPredicted RBP24.31■■□□□ 1.48
KNOP1-205ENST00000568230 TIMELESSQ9UNS1 1208 aa24.31■■□□□ 1.48
KNOP1-205ENST00000568230 PAK3O75914 559 aaPredicted RBP24.3■■□□□ 1.48
KNOP1-205ENST00000568230 RBM6P78332 1123 aaKnown RBP24.3■■□□□ 1.48
KNOP1-205ENST00000568230 PLCH1Q4KWH8 1693 aa24.29■■□□□ 1.48
KNOP1-205ENST00000568230 TRPC5Q9UL62 973 aaPredicted RBP24.29■■□□□ 1.48
KNOP1-205ENST00000568230 NWD2Q9ULI1 1742 aa24.28■■□□□ 1.48
KNOP1-205ENST00000568230 BRD4O60885 1362 aaPredicted RBP24.28■■□□□ 1.48
KNOP1-205ENST00000568230 ATAD2Q6PL18 1390 aa24.28■■□□□ 1.48
KNOP1-205ENST00000568230 PHRF1Q9P1Y6 1649 aaKnown RBP24.27■■□□□ 1.48
KNOP1-205ENST00000568230 PLEKHG5O94827 1062 aa24.27■■□□□ 1.48
KNOP1-205ENST00000568230 CABP1Q9NZU7 370 aa24.27■■□□□ 1.48
KNOP1-205ENST00000568230 RGS12O14924 1447 aa24.26■■□□□ 1.47
KNOP1-205ENST00000568230 USP6P35125 1406 aa24.26■■□□□ 1.47
KNOP1-205ENST00000568230 AKAP12Q02952 1782 aa24.23■■□□□ 1.47
KNOP1-205ENST00000568230 COL14A1Q05707 1796 aaKnown RBP24.23■■□□□ 1.47
KNOP1-205ENST00000568230 UNC5CLQ8IV45 518 aa24.23■■□□□ 1.47
KNOP1-205ENST00000568230 SSH2Q76I76 1423 aa24.23■■□□□ 1.47
KNOP1-205ENST00000568230 NRKQ7Z2Y5 1582 aa24.21■■□□□ 1.47
KNOP1-205ENST00000568230 NRAPQ86VF7 1730 aa24.21■■□□□ 1.47
KNOP1-205ENST00000568230 CPSF1Q10570 1443 aaKnown RBP24.2■■□□□ 1.46
KNOP1-205ENST00000568230 CCER1Q8TC90 406 aaPredicted RBP24.2■■□□□ 1.46
KNOP1-205ENST00000568230 TESK2Q96S53 571 aa24.2■■□□□ 1.46
KNOP1-205ENST00000568230 USP47Q96K76 1375 aa24.2■■□□□ 1.46
KNOP1-205ENST00000568230 USP19O94966 1318 aa24.2■■□□□ 1.46
KNOP1-205ENST00000568230 FAM83GA6ND36 823 aa24.19■■□□□ 1.46
KNOP1-205ENST00000568230 ABTB2Q8N961 1025 aa24.19■■□□□ 1.46
KNOP1-205ENST00000568230 GLI3P10071 1580 aa24.19■■□□□ 1.46
KNOP1-205ENST00000568230 ST20-MTHFSA0A0A6YYL1 179 aa24.18■■□□□ 1.46
KNOP1-205ENST00000568230 PIK3C2AO00443 1686 aa24.18■■□□□ 1.46
KNOP1-205ENST00000568230 MON2Q7Z3U7 1717 aa24.18■■□□□ 1.46
KNOP1-205ENST00000568230 NUTM2GQ5VZR2 741 aa24.17■■□□□ 1.46
KNOP1-205ENST00000568230 EP400Q96L91 3159 aa24.16■■□□□ 1.46
KNOP1-205ENST00000568230 GJD4Q96KN9 370 aaPredicted RBP24.16■■□□□ 1.46
KNOP1-205ENST00000568230 PUS7Q96PZ0 661 aaKnown RBP24.16■■□□□ 1.46
KNOP1-205ENST00000568230 KIAA0232Q92628 1395 aa24.15■■□□□ 1.46
KNOP1-205ENST00000568230 ZNF692Q9BU19 519 aaPredicted RBP24.15■■□□□ 1.46
KNOP1-205ENST00000568230 CD163L1Q9NR16 1453 aa24.15■■□□□ 1.46
KNOP1-205ENST00000568230 VPS72Q15906 364 aa24.14■■□□□ 1.46
KNOP1-205ENST00000568230 SLIT3O75094 1523 aa24.14■■□□□ 1.45
KNOP1-205ENST00000568230 SLC24A1O60721 1099 aa24.13■■□□□ 1.45
KNOP1-205ENST00000568230 PRDM11Q9NQV5 511 aa24.13■■□□□ 1.45
KNOP1-205ENST00000568230 NLRP13Q86W25 1043 aa24.12■■□□□ 1.45
KNOP1-205ENST00000568230 BTG4Q9NY30 223 aa24.12■■□□□ 1.45
KNOP1-205ENST00000568230 CPDO75976 1380 aa24.12■■□□□ 1.45
KNOP1-205ENST00000568230 KTN1Q86UP2 1357 aaKnown RBP24.12■■□□□ 1.45
KNOP1-205ENST00000568230 TTC21BQ7Z4L5 1316 aa24.11■■□□□ 1.45
KNOP1-205ENST00000568230 TTC21AQ8NDW8 1320 aa24.09■■□□□ 1.45
KNOP1-205ENST00000568230 NINLQ9Y2I6 1382 aa24.09■■□□□ 1.45
KNOP1-205ENST00000568230 LMO7Q8WWI1 1683 aa24.09■■□□□ 1.45
KNOP1-205ENST00000568230 GCP02774 474 aa24.08■■□□□ 1.44
KNOP1-205ENST00000568230 NLRP6P59044 892 aa24.08■■□□□ 1.44
KNOP1-205ENST00000568230 ZC3H6P61129 1189 aaKnown RBP24.08■■□□□ 1.44
KNOP1-205ENST00000568230 USP54Q70EL1 1684 aa24.07■■□□□ 1.44
KNOP1-205ENST00000568230 TMC1Q8TDI8 760 aa24.07■■□□□ 1.44
KNOP1-205ENST00000568230 SLC12A5Q9H2X9 1139 aa24.07■■□□□ 1.44
KNOP1-205ENST00000568230 CHRNA2Q15822 529 aa24.06■■□□□ 1.44
KNOP1-205ENST00000568230 A0A1W2PP64 1363 aa24.06■■□□□ 1.44
KNOP1-205ENST00000568230 EDC4Q6P2E9 1401 aaKnown RBP24.05■■□□□ 1.44
KNOP1-205ENST00000568230 UPF1Q92900 1129 aaKnown RBP eCLIP24.05■■□□□ 1.44
KNOP1-205ENST00000568230 HDGFL2Q7Z4V5 671 aaPredicted RBP24.04■■□□□ 1.44
KNOP1-205ENST00000568230 TERF2IPQ9NYB0 399 aa24.04■■□□□ 1.44
KNOP1-205ENST00000568230 CCDC9Q9Y3X0 531 aaKnown RBP24.04■■□□□ 1.44
KNOP1-205ENST00000568230 CAMTA1Q9Y6Y1 1673 aa24.03■■□□□ 1.44
KNOP1-205ENST00000568230 TMF1P82094 1093 aa24.03■■□□□ 1.44
KNOP1-205ENST00000568230 SPATA31A5Q5VU36 1347 aa24.02■■□□□ 1.44
KNOP1-205ENST00000568230 SPATA31A7Q8IWB4 1347 aa24.02■■□□□ 1.44
KNOP1-205ENST00000568230 ONECUT3O60422 494 aaPredicted RBP24.02■■□□□ 1.44
KNOP1-205ENST00000568230 BRWD3Q6RI45 1802 aa24.01■■□□□ 1.43
KNOP1-205ENST00000568230 USP31Q70CQ4 1352 aa24.01■■□□□ 1.43
KNOP1-205ENST00000568230 NFAT5O94916 1531 aa24.01■■□□□ 1.43
KNOP1-205ENST00000568230 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.99■■□□□ 1.43
KNOP1-205ENST00000568230 AATKQ6ZMQ8 1374 aa23.98■■□□□ 1.43
KNOP1-205ENST00000568230 THSD7AQ9UPZ6 1657 aa23.98■■□□□ 1.43
KNOP1-205ENST00000568230 COL5A2P05997 1499 aaPredicted RBP23.98■■□□□ 1.43
KNOP1-205ENST00000568230 SEPT12Q8IYM1 358 aa23.98■■□□□ 1.43
KNOP1-205ENST00000568230 COL18A1P39060 1754 aa23.98■■□□□ 1.43
KNOP1-205ENST00000568230 CDCA8Q53HL2 280 aa23.97■■□□□ 1.43
KNOP1-205ENST00000568230 KCNH5Q8NCM2 988 aa23.97■■□□□ 1.43
KNOP1-205ENST00000568230 ANKRD36BQ8N2N9 1353 aa23.97■■□□□ 1.43
KNOP1-205ENST00000568230 SPATA31A1Q5TZJ5 1347 aa23.96■■□□□ 1.43
KNOP1-205ENST00000568230 NME9Q86XW9 330 aa23.96■■□□□ 1.43
KNOP1-205ENST00000568230 STRN4Q9NRL3 753 aa23.96■■□□□ 1.43
KNOP1-205ENST00000568230 OVOS2A0A0J9YW53 1432 aa23.95■■□□□ 1.42
KNOP1-205ENST00000568230 OVOS2Q6IE36 1432 aa23.95■■□□□ 1.42
KNOP1-205ENST00000568230 MYOM1P52179 1685 aa23.95■■□□□ 1.42
KNOP1-205ENST00000568230 FAM98CQ17RN3 349 aaKnown RBP23.95■■□□□ 1.42
KNOP1-205ENST00000568230 ABCC6O95255 1503 aa23.94■■□□□ 1.42
KNOP1-205ENST00000568230 ARHGEF25Q86VW2 580 aa23.93■■□□□ 1.42
KNOP1-205ENST00000568230 ZRANB1Q9UGI0 708 aa23.93■■□□□ 1.42
KNOP1-205ENST00000568230 EVA1CP58658 441 aa23.91■■□□□ 1.42
KNOP1-205ENST00000568230 LARP1Q6PKG0 1096 aaKnown RBP23.91■■□□□ 1.42
KNOP1-205ENST00000568230 ZBTB7CA1YPR0 619 aa23.9■■□□□ 1.42
KNOP1-205ENST00000568230 SOX12O15370 315 aa23.89■■□□□ 1.42
KNOP1-205ENST00000568230 EIF4G2P78344 907 aaKnown RBP eCLIP23.89■■□□□ 1.42
KNOP1-205ENST00000568230 A0A0G2JS52 829 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms