RNA–Protein interactions for RNA: ENST00000567507.1

LPCAT4-207, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-207ENST00000567507 VPS72Q15906 364 aa11.93□□□□□ -0.5
LPCAT4-207ENST00000567507 KIF1AQ12756 1690 aa11.92□□□□□ -0.5
LPCAT4-207ENST00000567507 DDX10Q13206 875 aaKnown RBP11.92□□□□□ -0.5
LPCAT4-207ENST00000567507 SF3B2Q13435 895 aaKnown RBP11.92□□□□□ -0.5
LPCAT4-207ENST00000567507 TMEM132EQ6IEE7 984 aa11.92□□□□□ -0.5
LPCAT4-207ENST00000567507 TRAK1Q9UPV9 953 aa11.92□□□□□ -0.5
LPCAT4-207ENST00000567507 TECPR2O15040 1411 aa11.92□□□□□ -0.5
LPCAT4-207ENST00000567507 KRT27Q7Z3Y8 459 aa11.91□□□□□ -0.5
LPCAT4-207ENST00000567507 KNDC1Q76NI1 1749 aa11.91□□□□□ -0.5
LPCAT4-207ENST00000567507 RREB1Q92766 1687 aa11.91□□□□□ -0.5
LPCAT4-207ENST00000567507 THSD7AQ9UPZ6 1657 aa11.9□□□□□ -0.5
LPCAT4-207ENST00000567507 EVC2Q86UK5 1308 aa11.89□□□□□ -0.51
LPCAT4-207ENST00000567507 NUP188Q5SRE5 1749 aa11.89□□□□□ -0.51
LPCAT4-207ENST00000567507 UTRNP46939 3433 aa11.89□□□□□ -0.51
LPCAT4-207ENST00000567507 NUTM2FA1L443 756 aa11.89□□□□□ -0.51
LPCAT4-207ENST00000567507 C11orf95C9JLR9 678 aaPredicted RBP11.89□□□□□ -0.51
LPCAT4-207ENST00000567507 POGKQ9P215 609 aa11.89□□□□□ -0.51
LPCAT4-207ENST00000567507 CRYBG1Q9Y4K1 1723 aa11.89□□□□□ -0.51
LPCAT4-207ENST00000567507 CAMTA1Q9Y6Y1 1673 aa11.88□□□□□ -0.51
LPCAT4-207ENST00000567507 WAPLQ7Z5K2 1190 aa11.88□□□□□ -0.51
LPCAT4-207ENST00000567507 CABLES1Q8TDN4 633 aa11.88□□□□□ -0.51
LPCAT4-207ENST00000567507 PLEKHH1Q9ULM0 1364 aa11.88□□□□□ -0.51
LPCAT4-207ENST00000567507 ANP32CO43423 234 aa11.87□□□□□ -0.51
LPCAT4-207ENST00000567507 BAG6P46379 1132 aa11.87□□□□□ -0.51
LPCAT4-207ENST00000567507 STK26Q9P289 416 aa11.87□□□□□ -0.51
LPCAT4-207ENST00000567507 KTN1Q86UP2 1357 aaKnown RBP11.87□□□□□ -0.51
LPCAT4-207ENST00000567507 NINLQ9Y2I6 1382 aa11.87□□□□□ -0.51
LPCAT4-207ENST00000567507 DISP2A7MBM2 1401 aa11.86□□□□□ -0.51
LPCAT4-207ENST00000567507 TNS3Q68CZ2 1445 aa11.86□□□□□ -0.51
LPCAT4-207ENST00000567507 EN1Q05925 392 aaPredicted RBP11.86□□□□□ -0.51
LPCAT4-207ENST00000567507 R3HDM1Q15032 1099 aaKnown RBP11.86□□□□□ -0.51
LPCAT4-207ENST00000567507 KRT28Q7Z3Y7 464 aa11.86□□□□□ -0.51
LPCAT4-207ENST00000567507 PRAM1Q96QH2 718 aa11.86□□□□□ -0.51
LPCAT4-207ENST00000567507 TRPM3Q9HCF6 1732 aaPredicted RBP11.86□□□□□ -0.51
LPCAT4-207ENST00000567507 FAM83GA6ND36 823 aa11.85□□□□□ -0.51
LPCAT4-207ENST00000567507 ARHGEF28Q8N1W1 1705 aaKnown RBP11.83□□□□□ -0.52
LPCAT4-207ENST00000567507 FAM98CQ17RN3 349 aaKnown RBP11.83□□□□□ -0.52
LPCAT4-207ENST00000567507 CCDC9Q9Y3X0 531 aaKnown RBP11.83□□□□□ -0.52
LPCAT4-207ENST00000567507 ALS2Q96Q42 1657 aa11.83□□□□□ -0.52
LPCAT4-207ENST00000567507 ADGRB2O60241 1585 aa11.83□□□□□ -0.52
LPCAT4-207ENST00000567507 COL14A1Q05707 1796 aaKnown RBP11.82□□□□□ -0.52
LPCAT4-207ENST00000567507 SBNO1A3KN83 1393 aa11.82□□□□□ -0.52
LPCAT4-207ENST00000567507 CCER2I3L3R5 266 aa11.82□□□□□ -0.52
LPCAT4-207ENST00000567507 YY1P25490 414 aa11.82□□□□□ -0.52
LPCAT4-207ENST00000567507 FAM182BQ5T319 152 aa11.82□□□□□ -0.52
LPCAT4-207ENST00000567507 POLR3GLQ9BT43 218 aa11.82□□□□□ -0.52
LPCAT4-207ENST00000567507 QRICH2Q9H0J4 1663 aa11.81□□□□□ -0.52
LPCAT4-207ENST00000567507 PHF8Q9UPP1 1060 aa11.81□□□□□ -0.52
LPCAT4-207ENST00000567507 CEP350Q5VT06 3117 aa11.8□□□□□ -0.52
LPCAT4-207ENST00000567507 PLEKHG5O94827 1062 aa11.8□□□□□ -0.52
LPCAT4-207ENST00000567507 HAP1P54257 671 aaPredicted RBP11.8□□□□□ -0.52
LPCAT4-207ENST00000567507 EZH2Q15910 746 aaKnown RBP11.8□□□□□ -0.52
LPCAT4-207ENST00000567507 MIER1Q8N108 512 aa11.8□□□□□ -0.52
LPCAT4-207ENST00000567507 CAMKK2Q96RR4 588 aa11.8□□□□□ -0.52
LPCAT4-207ENST00000567507 ARHGEF10O15013 1369 aa11.79□□□□□ -0.52
LPCAT4-207ENST00000567507 NPC1L1Q9UHC9 1359 aa11.79□□□□□ -0.52
LPCAT4-207ENST00000567507 A0A0G2JS52 829 aa11.79□□□□□ -0.52
LPCAT4-207ENST00000567507 WASLO00401 505 aaPredicted RBP11.79□□□□□ -0.52
LPCAT4-207ENST00000567507 MSH5O43196 834 aa11.79□□□□□ -0.52
LPCAT4-207ENST00000567507 MYT1Q01538 1121 aa11.79□□□□□ -0.52
LPCAT4-207ENST00000567507 PSME1Q06323 249 aa11.79□□□□□ -0.52
LPCAT4-207ENST00000567507 RALBP1Q15311 655 aa11.79□□□□□ -0.52
LPCAT4-207ENST00000567507 PANK3Q9H999 370 aa11.79□□□□□ -0.52
LPCAT4-207ENST00000567507 BTG4Q9NY30 223 aa11.79□□□□□ -0.52
LPCAT4-207ENST00000567507 SPATA31A5Q5VU36 1347 aa11.79□□□□□ -0.52
LPCAT4-207ENST00000567507 SPATA31A7Q8IWB4 1347 aa11.79□□□□□ -0.52
LPCAT4-207ENST00000567507 PER1O15534 1290 aaPredicted RBP11.78□□□□□ -0.52
LPCAT4-207ENST00000567507 SRPK2P78362 688 aaKnown RBP11.78□□□□□ -0.52
LPCAT4-207ENST00000567507 CDK19Q9BWU1 502 aa11.78□□□□□ -0.52
LPCAT4-207ENST00000567507 TERF2IPQ9NYB0 399 aa11.78□□□□□ -0.52
LPCAT4-207ENST00000567507 KNSTRNQ9Y448 316 aa11.78□□□□□ -0.52
LPCAT4-207ENST00000567507 CASZ1Q86V15 1759 aa11.77□□□□□ -0.52
LPCAT4-207ENST00000567507 PRKRIP1Q9H875 184 aaPredicted RBP11.77□□□□□ -0.53
LPCAT4-207ENST00000567507 MINK1Q8N4C8 1332 aaPredicted RBP11.77□□□□□ -0.53
LPCAT4-207ENST00000567507 CCDC61Q9Y6R9 512 aa11.76□□□□□ -0.53
LPCAT4-207ENST00000567507 TULP4Q9NRJ4 1543 aa11.76□□□□□ -0.53
LPCAT4-207ENST00000567507 SAFB2Q14151 953 aaKnown RBP eCLIP11.75□□□□□ -0.53
LPCAT4-207ENST00000567507 LMOD2Q6P5Q4 547 aa11.75□□□□□ -0.53
LPCAT4-207ENST00000567507 CHD4Q14839 1912 aa11.75□□□□□ -0.53
LPCAT4-207ENST00000567507 ANKRD36BQ8N2N9 1353 aa11.75□□□□□ -0.53
LPCAT4-207ENST00000567507 PHRF1Q9P1Y6 1649 aaKnown RBP11.75□□□□□ -0.53
LPCAT4-207ENST00000567507 TRIM37O94972 964 aa11.74□□□□□ -0.53
LPCAT4-207ENST00000567507 HDGFL2Q7Z4V5 671 aaPredicted RBP11.74□□□□□ -0.53
LPCAT4-207ENST00000567507 TMC1Q8TDI8 760 aa11.74□□□□□ -0.53
LPCAT4-207ENST00000567507 ZNF692Q9BU19 519 aaPredicted RBP11.74□□□□□ -0.53
LPCAT4-207ENST00000567507 PARD3Q8TEW0 1356 aa11.74□□□□□ -0.53
LPCAT4-207ENST00000567507 NRKQ7Z2Y5 1582 aa11.74□□□□□ -0.53
LPCAT4-207ENST00000567507 MYOM1P52179 1685 aa11.74□□□□□ -0.53
LPCAT4-207ENST00000567507 NSD2O96028 1365 aa11.73□□□□□ -0.53
LPCAT4-207ENST00000567507 SBF2Q86WG5 1849 aa11.73□□□□□ -0.53
LPCAT4-207ENST00000567507 CABP2Q9NPB3 220 aa11.73□□□□□ -0.53
LPCAT4-207ENST00000567507 RGPD3A6NKT7 1758 aaPredicted RBP11.72□□□□□ -0.53
LPCAT4-207ENST00000567507 RGPD4Q7Z3J3 1758 aa11.72□□□□□ -0.53
LPCAT4-207ENST00000567507 ATP7BP35670 1465 aa11.72□□□□□ -0.53
LPCAT4-207ENST00000567507 ANKARQ7Z5J8 1434 aa11.72□□□□□ -0.53
LPCAT4-207ENST00000567507 CGNL1Q0VF96 1302 aa11.72□□□□□ -0.53
LPCAT4-207ENST00000567507 SPATA31A1Q5TZJ5 1347 aa11.72□□□□□ -0.53
LPCAT4-207ENST00000567507 FAM196AQ6ZSG2 479 aa11.72□□□□□ -0.53
LPCAT4-207ENST00000567507 PMFBP1Q8TBY8 1022 aa11.72□□□□□ -0.53
LPCAT4-207ENST00000567507 SLC12A5Q9H2X9 1139 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms