RNA–Protein interactions for RNA: ENST00000567507.1

LPCAT4-207, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-207ENST00000567507 NISCHQ9Y2I1 1504 aa20.13■□□□□ 0.81
LPCAT4-207ENST00000567507 ABCC9O60706 1549 aa18.74■□□□□ 0.59
LPCAT4-207ENST00000567507 CCDC180Q9P1Z9 1646 aa18.36■□□□□ 0.53
LPCAT4-207ENST00000567507 DNAJC5BQ9UF47 199 aa18.01■□□□□ 0.47
LPCAT4-207ENST00000567507 RB1CC1Q8TDY2 1594 aa17.61■□□□□ 0.41
LPCAT4-207ENST00000567507 UNC13AQ9UPW8 1703 aa17.45■□□□□ 0.38
LPCAT4-207ENST00000567507 NACADO15069 1562 aa17.36■□□□□ 0.37
LPCAT4-207ENST00000567507 PABPN1Q86U42 306 aaKnown RBP eCLIP17.3■□□□□ 0.361e-6■■□□□ 13.4
LPCAT4-207ENST00000567507 BICRAQ9NZM4 1560 aa17.25■□□□□ 0.35
LPCAT4-207ENST00000567507 DCAF8L2P0C7V8 631 aa17.08■□□□□ 0.32
LPCAT4-207ENST00000567507 MYO15BQ96JP2 1530 aa16.98■□□□□ 0.31
LPCAT4-207ENST00000567507 CC2D2AQ9P2K1 1620 aa16.96■□□□□ 0.3
LPCAT4-207ENST00000567507 CECR2Q9BXF3 1484 aa16.9■□□□□ 0.3
LPCAT4-207ENST00000567507 SHROOM4Q9ULL8 1493 aa16.82■□□□□ 0.28
LPCAT4-207ENST00000567507 EIF4G1Q04637 1599 aaKnown RBP16.79■□□□□ 0.28
LPCAT4-207ENST00000567507 DNAJC5Q9H3Z4 198 aa16.78■□□□□ 0.28
LPCAT4-207ENST00000567507 SCRIBQ14160 1630 aa16.68■□□□□ 0.26
LPCAT4-207ENST00000567507 ZCCHC6Q5VYS8 1495 aaKnown RBP16.62■□□□□ 0.25
LPCAT4-207ENST00000567507 DCAF1Q9Y4B6 1507 aa16.6■□□□□ 0.25
LPCAT4-207ENST00000567507 CUX2O14529 1486 aa16.31■□□□□ 0.2
LPCAT4-207ENST00000567507 ERCC6Q03468 1493 aa16.12■□□□□ 0.17
LPCAT4-207ENST00000567507 NCAPD3P42695 1498 aa16.04■□□□□ 0.16
LPCAT4-207ENST00000567507 THOC2Q8NI27 1593 aaKnown RBP16.02■□□□□ 0.16
LPCAT4-207ENST00000567507 NESP48681 1621 aa16.01■□□□□ 0.15
LPCAT4-207ENST00000567507 ATAD2BQ9ULI0 1458 aa15.93■□□□□ 0.14
LPCAT4-207ENST00000567507 HMGXB3Q12766 1538 aa15.92■□□□□ 0.14
LPCAT4-207ENST00000567507 KIF21AQ7Z4S6 1674 aa15.87■□□□□ 0.13
LPCAT4-207ENST00000567507 SMARCA4P51532 1647 aa15.86■□□□□ 0.13
LPCAT4-207ENST00000567507 SMARCA2P51531 1590 aa15.83■□□□□ 0.13
LPCAT4-207ENST00000567507 TRIM41Q8WV44 630 aa15.81■□□□□ 0.12
LPCAT4-207ENST00000567507 LAMC3Q9Y6N6 1575 aa15.78■□□□□ 0.12
LPCAT4-207ENST00000567507 AEBP2Q6ZN18 517 aaPredicted RBP15.76■□□□□ 0.11
LPCAT4-207ENST00000567507 BAZ1BQ9UIG0 1483 aaKnown RBP15.72■□□□□ 0.11
LPCAT4-207ENST00000567507 PEG3Q9GZU2 1588 aa15.71■□□□□ 0.11
LPCAT4-207ENST00000567507 BAZ1AQ9NRL2 1556 aaPredicted RBP15.64■□□□□ 0.09
LPCAT4-207ENST00000567507 WDR62O43379 1518 aa15.61■□□□□ 0.09
LPCAT4-207ENST00000567507 PDS5BQ9NTI5 1447 aa15.6■□□□□ 0.09
LPCAT4-207ENST00000567507 MRC2Q9UBG0 1479 aa15.57■□□□□ 0.08
LPCAT4-207ENST00000567507 MROH2BQ7Z745 1585 aa15.54■□□□□ 0.08
LPCAT4-207ENST00000567507 CADPSQ9ULU8 1353 aa15.51■□□□□ 0.07
LPCAT4-207ENST00000567507 RIMBP3CA6NJZ7 1639 aa15.45■□□□□ 0.06
LPCAT4-207ENST00000567507 RIMBP3BA6NNM3 1639 aa15.45■□□□□ 0.06
LPCAT4-207ENST00000567507 RIMBP3Q9UFD9 1639 aa15.45■□□□□ 0.06
LPCAT4-207ENST00000567507 OSCARQ8IYS5 282 aa15.4■□□□□ 0.06
LPCAT4-207ENST00000567507 CEP164Q9UPV0 1460 aa15.4■□□□□ 0.06
LPCAT4-207ENST00000567507 WIZO95785 1651 aa15.38■□□□□ 0.05
LPCAT4-207ENST00000567507 FANCD2Q9BXW9 1451 aa15.34■□□□□ 0.05
LPCAT4-207ENST00000567507 URB2Q14146 1524 aaKnown RBP15.32■□□□□ 0.04
LPCAT4-207ENST00000567507 ARHGEF11O15085 1522 aa15.3■□□□□ 0.04
LPCAT4-207ENST00000567507 CFTRP13569 1480 aa15.27■□□□□ 0.03
LPCAT4-207ENST00000567507 RSF1Q96T23 1441 aaPredicted RBP15.25■□□□□ 0.03
LPCAT4-207ENST00000567507 PRDM2Q13029 1718 aa15.23■□□□□ 0.03
LPCAT4-207ENST00000567507 SUPT5HO00267 1087 aaKnown RBP15.21■□□□□ 0.03
LPCAT4-207ENST00000567507 ZNF608Q9ULD9 1512 aaPredicted RBP15.2■□□□□ 0.02
LPCAT4-207ENST00000567507 CHD1O14646 1710 aa15.17■□□□□ 0.02
LPCAT4-207ENST00000567507 EIF4G3O43432 1585 aaKnown RBP15.15■□□□□ 0.02
LPCAT4-207ENST00000567507 ARAP1Q96P48 1450 aa15.14■□□□□ 0.01
LPCAT4-207ENST00000567507 IFT140Q96RY7 1462 aa15.09■□□□□ 0.01
LPCAT4-207ENST00000567507 TOP2AP11388 1531 aaKnown RBP15.09■□□□□ 0.01
LPCAT4-207ENST00000567507 CYB5RLQ6IPT4 315 aa15.06■□□□□ 0
LPCAT4-207ENST00000567507 TOPBP1Q92547 1522 aa15.04■□□□□ -0
LPCAT4-207ENST00000567507 TARBP1Q13395 1621 aaKnown RBP15.01□□□□□ -0.01
LPCAT4-207ENST00000567507 TRHP20396 242 aaPredicted RBP14.98□□□□□ -0.01
LPCAT4-207ENST00000567507 DNMBPQ6XZF7 1577 aa14.95□□□□□ -0.02
LPCAT4-207ENST00000567507 AQRO60306 1485 aaKnown RBP eCLIP14.94□□□□□ -0.021e-6■■■■■ 42.4
LPCAT4-207ENST00000567507 CLASP1Q7Z460 1538 aa14.93□□□□□ -0.02
LPCAT4-207ENST00000567507 CCDC88BA6NC98 1476 aa14.92□□□□□ -0.02
LPCAT4-207ENST00000567507 ABCC8Q09428 1581 aa14.88□□□□□ -0.03
LPCAT4-207ENST00000567507 POLA1P09884 1462 aaPredicted RBP14.85□□□□□ -0.03
LPCAT4-207ENST00000567507 FBLN2P98095 1184 aa14.84□□□□□ -0.03
LPCAT4-207ENST00000567507 SNAPC4Q5SXM2 1469 aa14.8□□□□□ -0.04
LPCAT4-207ENST00000567507 RAD54L2Q9Y4B4 1467 aa14.8□□□□□ -0.04
LPCAT4-207ENST00000567507 SYNJ1O43426 1573 aa14.77□□□□□ -0.04
LPCAT4-207ENST00000567507 TDRD9Q8NDG6 1382 aaKnown RBP14.77□□□□□ -0.04
LPCAT4-207ENST00000567507 WDR97A6NE52 1622 aa14.75□□□□□ -0.05
LPCAT4-207ENST00000567507 SOGA1O94964 1423 aa14.72□□□□□ -0.05
LPCAT4-207ENST00000567507 PBRM1Q86U86 1689 aa14.71□□□□□ -0.05
LPCAT4-207ENST00000567507 MAGI1Q96QZ7 1491 aaPredicted RBP14.7□□□□□ -0.06
LPCAT4-207ENST00000567507 GAPVD1Q14C86 1478 aa14.69□□□□□ -0.06
LPCAT4-207ENST00000567507 ERCC6L2Q5T890 1561 aa14.69□□□□□ -0.06
LPCAT4-207ENST00000567507 KIF13AQ9H1H9 1805 aa14.69□□□□□ -0.06
LPCAT4-207ENST00000567507 FGD5Q6ZNL6 1462 aa14.69□□□□□ -0.06
LPCAT4-207ENST00000567507 CHMP7Q8WUX9 453 aaPredicted RBP14.68□□□□□ -0.06
LPCAT4-207ENST00000567507 SYNJ2O15056 1496 aa14.66□□□□□ -0.06
LPCAT4-207ENST00000567507 CHIC1Q5VXU3 224 aa14.64□□□□□ -0.07
LPCAT4-207ENST00000567507 CUX1P39880 1505 aa14.64□□□□□ -0.07
LPCAT4-207ENST00000567507 GRIN2BQ13224 1484 aa14.63□□□□□ -0.07
LPCAT4-207ENST00000567507 ABCA5Q8WWZ7 1642 aa14.6□□□□□ -0.07
LPCAT4-207ENST00000567507 CEP170Q5SW79 1584 aa14.56□□□□□ -0.08
LPCAT4-207ENST00000567507 SHROOM2Q13796 1616 aa14.55□□□□□ -0.08
LPCAT4-207ENST00000567507 ADAMTS12P58397 1594 aa14.51□□□□□ -0.09
LPCAT4-207ENST00000567507 GRIN2AQ12879 1464 aa14.49□□□□□ -0.09
LPCAT4-207ENST00000567507 ABCA10Q8WWZ4 1543 aa14.48□□□□□ -0.09
LPCAT4-207ENST00000567507 NUP160Q12769 1436 aa14.47□□□□□ -0.09
LPCAT4-207ENST00000567507 DIP2BQ9P265 1576 aa14.42□□□□□ -0.1
LPCAT4-207ENST00000567507 ILDR1Q86SU0 546 aaPredicted RBP14.41□□□□□ -0.1
LPCAT4-207ENST00000567507 WRNQ14191 1432 aaPredicted RBP eCLIP14.39□□□□□ -0.11
LPCAT4-207ENST00000567507 KDM4FA0A1W2PPD8 638 aa14.38□□□□□ -0.11
LPCAT4-207ENST00000567507 ABCC10Q5T3U5 1492 aa14.38□□□□□ -0.11
LPCAT4-207ENST00000567507 KDM6BO15054 1643 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 151.4 ms