RNA–Protein interactions for RNA: ENST00000567479.1

KIFC3-231, Transcript of kinesin family member C3, human

TSL 4

Gene KIFC3, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC3-231	ENST00000567479	ABTB2	Q8N961	1025 aa		13.4	□□□□□ -0.26
KIFC3-231	ENST00000567479	BTG4	Q9NY30	223 aa		13.4	□□□□□ -0.26
KIFC3-231	ENST00000567479	CABP1	Q9NZU7	370 aa		13.4	□□□□□ -0.26
KIFC3-231	ENST00000567479	ATAD2	Q6PL18	1390 aa		13.39	□□□□□ -0.27
KIFC3-231	ENST00000567479	TONSL	Q96HA7	1378 aa		13.39	□□□□□ -0.27
KIFC3-231	ENST00000567479	CARD11	Q9BXL7	1154 aa		13.38	□□□□□ -0.27
KIFC3-231	ENST00000567479	PRDM11	Q9NQV5	511 aa		13.38	□□□□□ -0.27
KIFC3-231	ENST00000567479	MARF1	Q9Y4F3	1742 aa	Known RBP	13.38	□□□□□ -0.27
KIFC3-231	ENST00000567479	PPIP5K1	Q6PFW1	1433 aa		13.38	□□□□□ -0.27
KIFC3-231	ENST00000567479	RALGAPB	Q86X10	1494 aa		13.37	□□□□□ -0.27
KIFC3-231	ENST00000567479	ONECUT3	O60422	494 aa	Predicted RBP	13.37	□□□□□ -0.27
KIFC3-231	ENST00000567479	ZC3H6	P61129	1189 aa	Known RBP	13.37	□□□□□ -0.27
KIFC3-231	ENST00000567479	NLRP13	Q86W25	1043 aa		13.37	□□□□□ -0.27
KIFC3-231	ENST00000567479	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.36	□□□□□ -0.27
KIFC3-231	ENST00000567479	SEPT12	Q8IYM1	358 aa		13.36	□□□□□ -0.27
KIFC3-231	ENST00000567479	CCDC125	Q86Z20	511 aa		13.35	□□□□□ -0.27
KIFC3-231	ENST00000567479	ZNF692	Q9BU19	519 aa	Predicted RBP	13.35	□□□□□ -0.27
KIFC3-231	ENST00000567479	ALS2	Q96Q42	1657 aa		13.34	□□□□□ -0.27
KIFC3-231	ENST00000567479	ITSN1	Q15811	1721 aa		13.34	□□□□□ -0.27
KIFC3-231	ENST00000567479		A0A0G2JS52	829 aa		13.34	□□□□□ -0.27
KIFC3-231	ENST00000567479	MYT1	Q01538	1121 aa		13.34	□□□□□ -0.27
KIFC3-231	ENST00000567479	CHRNA2	Q15822	529 aa		13.34	□□□□□ -0.27
KIFC3-231	ENST00000567479	TRPM1	Q7Z4N2	1603 aa		13.34	□□□□□ -0.27
KIFC3-231	ENST00000567479	BRD4	O60885	1362 aa	Predicted RBP	13.33	□□□□□ -0.27
KIFC3-231	ENST00000567479	KIAA0232	Q92628	1395 aa		13.33	□□□□□ -0.27
KIFC3-231	ENST00000567479	EVA1C	P58658	441 aa		13.33	□□□□□ -0.28
KIFC3-231	ENST00000567479	FAM98C	Q17RN3	349 aa	Known RBP	13.33	□□□□□ -0.28
KIFC3-231	ENST00000567479	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.33	□□□□□ -0.28
KIFC3-231	ENST00000567479	GC	P02774	474 aa		13.32	□□□□□ -0.28
KIFC3-231	ENST00000567479	NLRP6	P59044	892 aa		13.32	□□□□□ -0.28
KIFC3-231	ENST00000567479	KRT27	Q7Z3Y8	459 aa		13.32	□□□□□ -0.28
KIFC3-231	ENST00000567479	STRN4	Q9NRL3	753 aa		13.32	□□□□□ -0.28
KIFC3-231	ENST00000567479	SPATA31A5	Q5VU36	1347 aa		13.32	□□□□□ -0.28
KIFC3-231	ENST00000567479	SPATA31A7	Q8IWB4	1347 aa		13.32	□□□□□ -0.28
KIFC3-231	ENST00000567479	GLI3	P10071	1580 aa		13.32	□□□□□ -0.28
KIFC3-231	ENST00000567479	QRICH2	Q9H0J4	1663 aa		13.31	□□□□□ -0.28
KIFC3-231	ENST00000567479	USP19	O94966	1318 aa		13.3	□□□□□ -0.28
KIFC3-231	ENST00000567479	TOPAZ1	Q8N9V7	1692 aa		13.3	□□□□□ -0.28
KIFC3-231	ENST00000567479	ABCA3	Q99758	1704 aa		13.3	□□□□□ -0.28
KIFC3-231	ENST00000567479	NWD2	Q9ULI1	1742 aa		13.3	□□□□□ -0.28
KIFC3-231	ENST00000567479	COL14A1	Q05707	1796 aa	Known RBP	13.3	□□□□□ -0.28
KIFC3-231	ENST00000567479	USP6	P35125	1406 aa		13.3	□□□□□ -0.28
KIFC3-231	ENST00000567479	PLCH1	Q4KWH8	1693 aa		13.29	□□□□□ -0.28
KIFC3-231	ENST00000567479	ZBTB7C	A1YPR0	619 aa		13.28	□□□□□ -0.28
KIFC3-231	ENST00000567479	SF3B2	Q13435	895 aa	Known RBP	13.28	□□□□□ -0.28
KIFC3-231	ENST00000567479	SPATA31A1	Q5TZJ5	1347 aa		13.28	□□□□□ -0.28
KIFC3-231	ENST00000567479	TTC21B	Q7Z4L5	1316 aa		13.28	□□□□□ -0.28
KIFC3-231	ENST00000567479	CPD	O75976	1380 aa		13.28	□□□□□ -0.28
KIFC3-231	ENST00000567479	SBNO2	Q9Y2G9	1366 aa		13.28	□□□□□ -0.28
KIFC3-231	ENST00000567479	SLC24A1	O60721	1099 aa		13.27	□□□□□ -0.29
KIFC3-231	ENST00000567479	TMC1	Q8TDI8	760 aa		13.27	□□□□□ -0.29
KIFC3-231	ENST00000567479	PCGF6	Q9BYE7	350 aa		13.27	□□□□□ -0.29
KIFC3-231	ENST00000567479	USP35	Q9P2H5	1018 aa		13.27	□□□□□ -0.29
KIFC3-231	ENST00000567479	SSH2	Q76I76	1423 aa		13.27	□□□□□ -0.29
KIFC3-231	ENST00000567479	LARP1	Q6PKG0	1096 aa	Known RBP	13.26	□□□□□ -0.29
KIFC3-231	ENST00000567479	TTC21A	Q8NDW8	1320 aa		13.26	□□□□□ -0.29
KIFC3-231	ENST00000567479	PUS7	Q96PZ0	661 aa	Known RBP	13.26	□□□□□ -0.29
KIFC3-231	ENST00000567479	BLM	P54132	1417 aa	Predicted RBP	13.25	□□□□□ -0.29
KIFC3-231	ENST00000567479	KTN1	Q86UP2	1357 aa	Known RBP	13.25	□□□□□ -0.29
KIFC3-231	ENST00000567479	ST20-MTHFS	A0A0A6YYL1	179 aa		13.25	□□□□□ -0.29
KIFC3-231	ENST00000567479	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.25	□□□□□ -0.29
KIFC3-231	ENST00000567479	KCNH5	Q8NCM2	988 aa		13.25	□□□□□ -0.29
KIFC3-231	ENST00000567479	SLC12A5	Q9H2X9	1139 aa		13.25	□□□□□ -0.29
KIFC3-231	ENST00000567479	CRYBG1	Q9Y4K1	1723 aa		13.25	□□□□□ -0.29
KIFC3-231	ENST00000567479	CPSF1	Q10570	1443 aa	Known RBP	13.24	□□□□□ -0.29
KIFC3-231	ENST00000567479	BARGIN	Q6ZT62	677 aa		13.24	□□□□□ -0.29
KIFC3-231	ENST00000567479	TCP11L2	Q8N4U5	519 aa		13.24	□□□□□ -0.29
KIFC3-231	ENST00000567479	ZRANB1	Q9UGI0	708 aa		13.24	□□□□□ -0.29
KIFC3-231	ENST00000567479	TIMELESS	Q9UNS1	1208 aa		13.24	□□□□□ -0.29
KIFC3-231	ENST00000567479	NRAP	Q86VF7	1730 aa		13.24	□□□□□ -0.29
KIFC3-231	ENST00000567479	FAM182B	Q5T319	152 aa		13.23	□□□□□ -0.29
KIFC3-231	ENST00000567479	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.23	□□□□□ -0.29	7e-8	■□□□□ 8.7
KIFC3-231	ENST00000567479	TESK2	Q96S53	571 aa		13.23	□□□□□ -0.29
KIFC3-231	ENST00000567479	TERF2IP	Q9NYB0	399 aa		13.23	□□□□□ -0.29
KIFC3-231	ENST00000567479	THRAP3	Q9Y2W1	955 aa	Known RBP	13.23	□□□□□ -0.29
KIFC3-231	ENST00000567479	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.23	□□□□□ -0.29
KIFC3-231	ENST00000567479	AATK	Q6ZMQ8	1374 aa		13.22	□□□□□ -0.29
KIFC3-231	ENST00000567479	CAMTA1	Q9Y6Y1	1673 aa		13.22	□□□□□ -0.29
KIFC3-231	ENST00000567479	SOX12	O15370	315 aa		13.22	□□□□□ -0.29
KIFC3-231	ENST00000567479	PDE3B	Q13370	1112 aa		13.22	□□□□□ -0.29
KIFC3-231	ENST00000567479	DEFB132	Q7Z7B7	95 aa		13.22	□□□□□ -0.29
KIFC3-231	ENST00000567479	ARHGEF25	Q86VW2	580 aa		13.22	□□□□□ -0.29
KIFC3-231	ENST00000567479	CLSPN	Q9HAW4	1339 aa		13.21	□□□□□ -0.29
KIFC3-231	ENST00000567479	NRK	Q7Z2Y5	1582 aa		13.21	□□□□□ -0.29
KIFC3-231	ENST00000567479	BAG6	P46379	1132 aa		13.2	□□□□□ -0.3
KIFC3-231	ENST00000567479	FAM196A	Q6ZSG2	479 aa		13.2	□□□□□ -0.3
KIFC3-231	ENST00000567479	TOM1L2	Q6ZVM7	507 aa		13.2	□□□□□ -0.3
KIFC3-231	ENST00000567479	AXIN2	Q9Y2T1	843 aa		13.2	□□□□□ -0.3
KIFC3-231	ENST00000567479	BRWD3	Q6RI45	1802 aa		13.19	□□□□□ -0.3
KIFC3-231	ENST00000567479	TMF1	P82094	1093 aa		13.19	□□□□□ -0.3
KIFC3-231	ENST00000567479	NME9	Q86XW9	330 aa		13.19	□□□□□ -0.3
KIFC3-231	ENST00000567479	EP400	Q96L91	3159 aa		13.19	□□□□□ -0.3
KIFC3-231	ENST00000567479	SLIT3	O75094	1523 aa		13.18	□□□□□ -0.3
KIFC3-231	ENST00000567479	USP31	Q70CQ4	1352 aa		13.18	□□□□□ -0.3
KIFC3-231	ENST00000567479	COL5A2	P05997	1499 aa	Predicted RBP	13.17	□□□□□ -0.3
KIFC3-231	ENST00000567479	CRB1	P82279	1406 aa		13.17	□□□□□ -0.3
KIFC3-231	ENST00000567479	CSB-PGBD3	P0DP91	1061 aa		13.17	□□□□□ -0.3
KIFC3-231	ENST00000567479	CD163L1	Q9NR16	1453 aa		13.16	□□□□□ -0.3
KIFC3-231	ENST00000567479	WDR17	Q8IZU2	1322 aa		13.16	□□□□□ -0.3
KIFC3-231	ENST00000567479	TRIM37	O94972	964 aa		13.16	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms