RNA–Protein interactions for RNA: ENST00000567284.6

FANCA-223, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-223	ENST00000567284	PHLPP1	O60346	1717 aa		12.84	□□□□□ -0.35
FANCA-223	ENST00000567284	ANKRD26	Q9UPS8	1709 aa		12.84	□□□□□ -0.35
FANCA-223	ENST00000567284	NHSL1	Q5SYE7	1610 aa		12.84	□□□□□ -0.35
FANCA-223	ENST00000567284	TRPM3	Q9HCF6	1732 aa	Predicted RBP	12.83	□□□□□ -0.36
FANCA-223	ENST00000567284	USP6	P35125	1406 aa		12.83	□□□□□ -0.36
FANCA-223	ENST00000567284	LMOD2	Q6P5Q4	547 aa		12.82	□□□□□ -0.36
FANCA-223	ENST00000567284	EDC4	Q6P2E9	1401 aa	Known RBP	12.81	□□□□□ -0.36
FANCA-223	ENST00000567284	SOCS7	O14512	581 aa		12.81	□□□□□ -0.36
FANCA-223	ENST00000567284	PER1	O15534	1290 aa	Predicted RBP	12.81	□□□□□ -0.36
FANCA-223	ENST00000567284	NUTM2G	Q5VZR2	741 aa		12.81	□□□□□ -0.36
FANCA-223	ENST00000567284	NME9	Q86XW9	330 aa		12.81	□□□□□ -0.36
FANCA-223	ENST00000567284	ZRANB1	Q9UGI0	708 aa		12.81	□□□□□ -0.36
FANCA-223	ENST00000567284	NPHP3	Q7Z494	1330 aa		12.81	□□□□□ -0.36
FANCA-223	ENST00000567284	TTC21B	Q7Z4L5	1316 aa		12.81	□□□□□ -0.36
FANCA-223	ENST00000567284	PIK3C2A	O00443	1686 aa		12.8	□□□□□ -0.36
FANCA-223	ENST00000567284	GGNBP2	Q9H3C7	697 aa		12.8	□□□□□ -0.36
FANCA-223	ENST00000567284	CGNL1	Q0VF96	1302 aa		12.8	□□□□□ -0.36
FANCA-223	ENST00000567284	MAP2	P11137	1827 aa	Known RBP	12.79	□□□□□ -0.36
FANCA-223	ENST00000567284	ANP32C	O43423	234 aa		12.79	□□□□□ -0.36
FANCA-223	ENST00000567284	ALS2	Q96Q42	1657 aa		12.79	□□□□□ -0.36
FANCA-223	ENST00000567284	PXDN	Q92626	1479 aa		12.78	□□□□□ -0.36
FANCA-223	ENST00000567284	AMER1	Q5JTC6	1135 aa	Predicted RBP	12.78	□□□□□ -0.36
FANCA-223	ENST00000567284	ABTB2	Q8N961	1025 aa		12.78	□□□□□ -0.36
FANCA-223	ENST00000567284	MARF1	Q9Y4F3	1742 aa	Known RBP	12.78	□□□□□ -0.36
FANCA-223	ENST00000567284	FYB1	O15117	783 aa		12.77	□□□□□ -0.37
FANCA-223	ENST00000567284	TNNT2	P45379	298 aa	Predicted RBP	12.77	□□□□□ -0.37
FANCA-223	ENST00000567284	TTC21A	Q8NDW8	1320 aa		12.77	□□□□□ -0.37
FANCA-223	ENST00000567284	SSH2	Q76I76	1423 aa		12.77	□□□□□ -0.37
FANCA-223	ENST00000567284	AHDC1	Q5TGY3	1603 aa	Predicted RBP	12.77	□□□□□ -0.37
FANCA-223	ENST00000567284	SOX12	O15370	315 aa		12.76	□□□□□ -0.37
FANCA-223	ENST00000567284	NLRP6	P59044	892 aa		12.76	□□□□□ -0.37
FANCA-223	ENST00000567284	MORC1	Q86VD1	984 aa		12.76	□□□□□ -0.37
FANCA-223	ENST00000567284	COG3	Q96JB2	828 aa		12.75	□□□□□ -0.37
FANCA-223	ENST00000567284	COL16A1	Q07092	1604 aa	Predicted RBP	12.74	□□□□□ -0.37
FANCA-223	ENST00000567284	TNS3	Q68CZ2	1445 aa		12.74	□□□□□ -0.37
FANCA-223	ENST00000567284	SBNO1	A3KN83	1393 aa		12.74	□□□□□ -0.37
FANCA-223	ENST00000567284	BRD4	O60885	1362 aa	Predicted RBP	12.74	□□□□□ -0.37
FANCA-223	ENST00000567284	SOS2	Q07890	1332 aa	Predicted RBP	12.74	□□□□□ -0.37
FANCA-223	ENST00000567284	LTN1	O94822	1766 aa		12.74	□□□□□ -0.37
FANCA-223	ENST00000567284	NSD2	O96028	1365 aa		12.73	□□□□□ -0.37
FANCA-223	ENST00000567284	SPATA31A3	Q5VYP0	1347 aa		12.73	□□□□□ -0.37
FANCA-223	ENST00000567284	ZBTB7C	A1YPR0	619 aa		12.73	□□□□□ -0.37
FANCA-223	ENST00000567284	MIER1	Q8N108	512 aa		12.73	□□□□□ -0.37
FANCA-223	ENST00000567284	USP54	Q70EL1	1684 aa		12.73	□□□□□ -0.37
FANCA-223	ENST00000567284	PHRF1	Q9P1Y6	1649 aa	Known RBP	12.73	□□□□□ -0.37
FANCA-223	ENST00000567284	NPC1L1	Q9UHC9	1359 aa		12.72	□□□□□ -0.37
FANCA-223	ENST00000567284	ABCA3	Q99758	1704 aa		12.72	□□□□□ -0.37
FANCA-223	ENST00000567284	FBLN1	P23142	703 aa		12.72	□□□□□ -0.37
FANCA-223	ENST00000567284	NLRP13	Q86W25	1043 aa		12.72	□□□□□ -0.37
FANCA-223	ENST00000567284	PRKRIP1	Q9H875	184 aa	Predicted RBP	12.72	□□□□□ -0.37
FANCA-223	ENST00000567284	CRYBG1	Q9Y4K1	1723 aa		12.71	□□□□□ -0.37
FANCA-223	ENST00000567284	RALBP1	Q15311	655 aa		12.71	□□□□□ -0.37
FANCA-223	ENST00000567284	CABLES1	Q8TDN4	633 aa		12.71	□□□□□ -0.37
FANCA-223	ENST00000567284	LRRC59	Q96AG4	307 aa	Known RBP	12.71	□□□□□ -0.37
FANCA-223	ENST00000567284	RGPD5	Q99666	1765 aa		12.71	□□□□□ -0.38
FANCA-223	ENST00000567284	OVOS2	A0A0J9YW53	1432 aa		12.71	□□□□□ -0.38
FANCA-223	ENST00000567284	OVOS2	Q6IE36	1432 aa		12.71	□□□□□ -0.38
FANCA-223	ENST00000567284	ARHGEF10	O15013	1369 aa		12.7	□□□□□ -0.38
FANCA-223	ENST00000567284	PARD3	Q8TEW0	1356 aa		12.7	□□□□□ -0.38
FANCA-223	ENST00000567284	HAP1	P54257	671 aa	Predicted RBP	12.7	□□□□□ -0.38
FANCA-223	ENST00000567284	USP31	Q70CQ4	1352 aa		12.69	□□□□□ -0.38
FANCA-223	ENST00000567284	MED1	Q15648	1581 aa	Predicted RBP	12.69	□□□□□ -0.38
FANCA-223	ENST00000567284	HSPA1L	P34931	641 aa		12.69	□□□□□ -0.38
FANCA-223	ENST00000567284	MYBBP1A	Q9BQG0	1328 aa	Known RBP	12.68	□□□□□ -0.38
FANCA-223	ENST00000567284	PPM1G	O15355	546 aa	Predicted RBP	12.68	□□□□□ -0.38
FANCA-223	ENST00000567284	PPP2R1A	P30153	589 aa		12.68	□□□□□ -0.38
FANCA-223	ENST00000567284	RRS1	Q15050	365 aa	Known RBP	12.68	□□□□□ -0.38
FANCA-223	ENST00000567284	SHPRH	Q149N8	1683 aa		12.67	□□□□□ -0.38
FANCA-223	ENST00000567284	COL22A1	Q8NFW1	1626 aa	Predicted RBP	12.67	□□□□□ -0.38
FANCA-223	ENST00000567284	NUTM2B	A6NNL0	878 aa	Predicted RBP	12.67	□□□□□ -0.38
FANCA-223	ENST00000567284	NUTM2E	B1AL46	878 aa	Predicted RBP	12.67	□□□□□ -0.38
FANCA-223	ENST00000567284	NUTM2A	Q8IVF1	878 aa	Predicted RBP	12.67	□□□□□ -0.38
FANCA-223	ENST00000567284	PNPLA6	Q8IY17	1366 aa		12.67	□□□□□ -0.38
FANCA-223	ENST00000567284	SLIT3	O75094	1523 aa		12.67	□□□□□ -0.38
FANCA-223	ENST00000567284	ZC3H6	P61129	1189 aa	Known RBP	12.66	□□□□□ -0.38
FANCA-223	ENST00000567284	PEAK1	Q9H792	1746 aa		12.65	□□□□□ -0.38
FANCA-223	ENST00000567284	USP19	O94966	1318 aa		12.65	□□□□□ -0.38
FANCA-223	ENST00000567284	GC	P02774	474 aa		12.65	□□□□□ -0.38
FANCA-223	ENST00000567284	MTHFS	P49914	203 aa		12.65	□□□□□ -0.38
FANCA-223	ENST00000567284	ILDR2	Q71H61	639 aa		12.65	□□□□□ -0.38
FANCA-223	ENST00000567284	KCNH5	Q8NCM2	988 aa		12.65	□□□□□ -0.38
FANCA-223	ENST00000567284	EMILIN1	Q9Y6C2	1016 aa		12.65	□□□□□ -0.38
FANCA-223	ENST00000567284	NFAT5	O94916	1531 aa		12.65	□□□□□ -0.38
FANCA-223	ENST00000567284	AMPH	P49418	695 aa		12.64	□□□□□ -0.39
FANCA-223	ENST00000567284	CCDC184	Q52MB2	194 aa		12.64	□□□□□ -0.39
FANCA-223	ENST00000567284	RGPD2	P0DJD1	1756 aa		12.64	□□□□□ -0.39
FANCA-223	ENST00000567284	FBXO41	Q8TF61	875 aa		12.63	□□□□□ -0.39
FANCA-223	ENST00000567284	MRS2	Q9HD23	443 aa		12.63	□□□□□ -0.39
FANCA-223	ENST00000567284	POLK	Q9UBT6	870 aa		12.63	□□□□□ -0.39
FANCA-223	ENST00000567284	JCAD	Q9P266	1359 aa		12.63	□□□□□ -0.39
FANCA-223	ENST00000567284	MAP3K19	Q56UN5	1328 aa		12.62	□□□□□ -0.39
FANCA-223	ENST00000567284	AATK	Q6ZMQ8	1374 aa		12.62	□□□□□ -0.39
FANCA-223	ENST00000567284	ADAMTS2	O95450	1211 aa		12.62	□□□□□ -0.39
FANCA-223	ENST00000567284	CHRNA2	Q15822	529 aa		12.62	□□□□□ -0.39
FANCA-223	ENST00000567284	LTV1	Q96GA3	475 aa	Predicted RBP	12.61	□□□□□ -0.39
FANCA-223	ENST00000567284	CFAP53	Q96M91	514 aa		12.61	□□□□□ -0.39
FANCA-223	ENST00000567284	COL18A1	P39060	1754 aa		12.61	□□□□□ -0.39
FANCA-223	ENST00000567284	KIAA0232	Q92628	1395 aa		12.6	□□□□□ -0.39
FANCA-223	ENST00000567284	PRDM11	Q9NQV5	511 aa		12.6	□□□□□ -0.39
FANCA-223	ENST00000567284	PLCH1	Q4KWH8	1693 aa		12.59	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms