RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 RBM25P49756 843 aaKnown RBP19.76■□□□□ 0.75
COMMD4-215ENST00000566843 ARXQ96QS3 562 aa19.75■□□□□ 0.75
COMMD4-215ENST00000566843 SLC12A5Q9H2X9 1139 aa19.75■□□□□ 0.75
COMMD4-215ENST00000566843 EFCAB6Q5THR3 1501 aa19.75■□□□□ 0.75
COMMD4-215ENST00000566843 TNNT2P45379 298 aaPredicted RBP19.74■□□□□ 0.75
COMMD4-215ENST00000566843 NAP1L5Q96NT1 182 aaPredicted RBP19.74■□□□□ 0.75
COMMD4-215ENST00000566843 DDX19BQ9UMR2 479 aa19.74■□□□□ 0.75
COMMD4-215ENST00000566843 CIZ1Q9ULV3 898 aaPredicted RBP19.74■□□□□ 0.75
COMMD4-215ENST00000566843 NSD2O96028 1365 aa19.73■□□□□ 0.75
COMMD4-215ENST00000566843 ADGRB3O60242 1522 aa19.73■□□□□ 0.75
COMMD4-215ENST00000566843 TRIM27P14373 513 aa19.72■□□□□ 0.75
COMMD4-215ENST00000566843 PUS7Q96PZ0 661 aaKnown RBP19.72■□□□□ 0.75
COMMD4-215ENST00000566843 ADGRB1O14514 1584 aa19.71■□□□□ 0.75
COMMD4-215ENST00000566843 NOS1P29475 1434 aa19.71■□□□□ 0.75
COMMD4-215ENST00000566843 ATF7IPQ6VMQ6 1270 aa19.7■□□□□ 0.74
COMMD4-215ENST00000566843 SMC4Q9NTJ3 1288 aa19.7■□□□□ 0.74
COMMD4-215ENST00000566843 LMTK2Q8IWU2 1503 aa19.7■□□□□ 0.74
COMMD4-215ENST00000566843 ESPNB1AK53 854 aa19.69■□□□□ 0.74
COMMD4-215ENST00000566843 RRP9O43818 475 aaKnown RBP19.69■□□□□ 0.74
COMMD4-215ENST00000566843 GLIPR1L2Q4G1C9 344 aa19.69■□□□□ 0.74
COMMD4-215ENST00000566843 C14orf93Q9H972 538 aaKnown RBP19.69■□□□□ 0.74
COMMD4-215ENST00000566843 HSP90AA1P07900 732 aaKnown RBP19.68■□□□□ 0.74
COMMD4-215ENST00000566843 PTMSP20962 102 aa19.68■□□□□ 0.74
COMMD4-215ENST00000566843 EXOSC9Q06265 439 aaKnown RBP19.68■□□□□ 0.74
COMMD4-215ENST00000566843 SSH1Q8WYL5 1049 aa19.68■□□□□ 0.74
COMMD4-215ENST00000566843 PPLO60437 1756 aa19.68■□□□□ 0.74
COMMD4-215ENST00000566843 IL16Q14005 1332 aa19.68■□□□□ 0.74
COMMD4-215ENST00000566843 U2AF1L5P0DN76 240 aaPredicted RBP19.68■□□□□ 0.74
COMMD4-215ENST00000566843 U2AF1Q01081 240 aaKnown RBP eCLIP19.68■□□□□ 0.74
COMMD4-215ENST00000566843 TNPO1Q92973 898 aaKnown RBP19.68■□□□□ 0.74
COMMD4-215ENST00000566843 ZBTB40Q9NUA8 1239 aa19.68■□□□□ 0.74
COMMD4-215ENST00000566843 NUCB1Q02818 461 aa19.67■□□□□ 0.74
COMMD4-215ENST00000566843 RAB3GAP1Q15042 981 aa19.67■□□□□ 0.74
COMMD4-215ENST00000566843 SKOR2Q2VWA4 1001 aaPredicted RBP19.67■□□□□ 0.74
COMMD4-215ENST00000566843 ITPRIPQ8IWB1 547 aa19.67■□□□□ 0.74
COMMD4-215ENST00000566843 TSR2Q969E8 191 aaKnown RBP19.67■□□□□ 0.74
COMMD4-215ENST00000566843 PLEKHF1Q96S99 279 aa19.67■□□□□ 0.74
COMMD4-215ENST00000566843 TRAK1Q9UPV9 953 aa19.67■□□□□ 0.74
COMMD4-215ENST00000566843 ANKRD36BQ8N2N9 1353 aa19.66■□□□□ 0.74
COMMD4-215ENST00000566843 ERBB4Q15303 1308 aa19.66■□□□□ 0.74
COMMD4-215ENST00000566843 MLECQ14165 292 aa19.65■□□□□ 0.74
COMMD4-215ENST00000566843 PKNOX2Q96KN3 472 aa19.65■□□□□ 0.74
COMMD4-215ENST00000566843 GBP4Q96PP9 640 aa19.65■□□□□ 0.74
COMMD4-215ENST00000566843 ABCC11Q96J66 1382 aa19.65■□□□□ 0.74
COMMD4-215ENST00000566843 ARHGEF40Q8TER5 1519 aa19.65■□□□□ 0.74
COMMD4-215ENST00000566843 TRIM35Q9UPQ4 493 aa19.65■□□□□ 0.74
COMMD4-215ENST00000566843 NOB1Q9ULX3 412 aaKnown RBP19.64■□□□□ 0.74
COMMD4-215ENST00000566843 SIGLEC1Q9BZZ2 1709 aa19.64■□□□□ 0.74
COMMD4-215ENST00000566843 TMPOP42166 694 aaKnown RBP19.64■□□□□ 0.73
COMMD4-215ENST00000566843 GAS2L3Q86XJ1 694 aa19.64■□□□□ 0.73
COMMD4-215ENST00000566843 TMEM57Q8N5G2 664 aa19.64■□□□□ 0.73
COMMD4-215ENST00000566843 COL3A1P02461 1466 aaPredicted RBP19.63■□□□□ 0.73
COMMD4-215ENST00000566843 HSP90AA2PQ14568 343 aaPredicted RBP19.63■□□□□ 0.73
COMMD4-215ENST00000566843 ABCC3O15438 1527 aa19.63■□□□□ 0.73
COMMD4-215ENST00000566843 KIF2CQ99661 725 aa19.62■□□□□ 0.73
COMMD4-215ENST00000566843 BMP2KLQ5H9B9 411 aa19.62■□□□□ 0.73
COMMD4-215ENST00000566843 TULP4Q9NRJ4 1543 aa19.61■□□□□ 0.73
COMMD4-215ENST00000566843 KIF16BQ96L93 1317 aa19.61■□□□□ 0.73
COMMD4-215ENST00000566843 IPO8O15397 1037 aaKnown RBP19.6■□□□□ 0.73
COMMD4-215ENST00000566843 HSP90AB1P08238 724 aaKnown RBP19.6■□□□□ 0.73
COMMD4-215ENST00000566843 CHD1LQ86WJ1 897 aa19.6■□□□□ 0.73
COMMD4-215ENST00000566843 REREQ9P2R6 1566 aa19.6■□□□□ 0.73
COMMD4-215ENST00000566843 NPATQ14207 1427 aa19.6■□□□□ 0.73
COMMD4-215ENST00000566843 CLEC17AQ6ZS10 378 aa19.59■□□□□ 0.73
COMMD4-215ENST00000566843 ALDH1L2Q3SY69 923 aa19.59■□□□□ 0.73
COMMD4-215ENST00000566843 TRIM44Q96DX7 344 aaPredicted RBP19.59■□□□□ 0.73
COMMD4-215ENST00000566843 EVC2Q86UK5 1308 aa19.59■□□□□ 0.73
COMMD4-215ENST00000566843 RPGRIP1LQ68CZ1 1315 aa19.58■□□□□ 0.73
COMMD4-215ENST00000566843 MED14O60244 1454 aa19.58■□□□□ 0.73
COMMD4-215ENST00000566843 AGLP35573 1532 aa19.58■□□□□ 0.73
COMMD4-215ENST00000566843 ARHGEF28Q8N1W1 1705 aaKnown RBP19.58■□□□□ 0.72
COMMD4-215ENST00000566843 ARHGAP31Q2M1Z3 1444 aa19.58■□□□□ 0.72
COMMD4-215ENST00000566843 BRPF1P55201 1214 aaPredicted RBP19.57■□□□□ 0.72
COMMD4-215ENST00000566843 PPP1R9BQ96SB3 815 aa19.57■□□□□ 0.72
COMMD4-215ENST00000566843 LNPKQ9C0E8 428 aa19.57■□□□□ 0.72
COMMD4-215ENST00000566843 IBTKQ9P2D0 1353 aaPredicted RBP19.57■□□□□ 0.72
COMMD4-215ENST00000566843 TPM2P07951 284 aa19.56■□□□□ 0.72
COMMD4-215ENST00000566843 K7ELQ4 463 aaPredicted RBP19.55■□□□□ 0.72
COMMD4-215ENST00000566843 CCDC173Q0VFZ6 552 aa19.55■□□□□ 0.72
COMMD4-215ENST00000566843 TMEM132EQ6IEE7 984 aa19.55■□□□□ 0.72
COMMD4-215ENST00000566843 CFAP65Q6ZU64 1925 aaKnown RBP19.55■□□□□ 0.72
COMMD4-215ENST00000566843 CAMSAP1Q5T5Y3 1602 aa19.55■□□□□ 0.72
COMMD4-215ENST00000566843 ANKRD26Q9UPS8 1709 aa19.54■□□□□ 0.72
COMMD4-215ENST00000566843 GCC1Q96CN9 775 aa19.54■□□□□ 0.72
COMMD4-215ENST00000566843 CD2BP2O95400 341 aaKnown RBP19.53■□□□□ 0.72
COMMD4-215ENST00000566843 U2SURPO15042 1029 aaKnown RBP19.53■□□□□ 0.72
COMMD4-215ENST00000566843 ZNF428Q96B54 188 aa19.53■□□□□ 0.72
COMMD4-215ENST00000566843 PPIP5K1Q6PFW1 1433 aa19.52■□□□□ 0.72
COMMD4-215ENST00000566843 PIK3R4Q99570 1358 aa19.52■□□□□ 0.72
COMMD4-215ENST00000566843 CHGAP10645 457 aaKnown RBP19.51■□□□□ 0.71
COMMD4-215ENST00000566843 RIPK4P57078 832 aa19.51■□□□□ 0.71
COMMD4-215ENST00000566843 KLHL40Q2TBA0 621 aa19.5■□□□□ 0.71
COMMD4-215ENST00000566843 TBC1D9Q6ZT07 1266 aa19.5■□□□□ 0.71
COMMD4-215ENST00000566843 CHMP4BQ9H444 224 aaKnown RBP19.5■□□□□ 0.71
COMMD4-215ENST00000566843 A0A1W2PP64 1363 aa19.5■□□□□ 0.71
COMMD4-215ENST00000566843 ZBTB7BO15156 539 aaPredicted RBP19.5■□□□□ 0.71
COMMD4-215ENST00000566843 FBXO31Q5XUX0 539 aaPredicted RBP19.5■□□□□ 0.71
COMMD4-215ENST00000566843 SSFA2P28290 1259 aa19.49■□□□□ 0.71
COMMD4-215ENST00000566843 PNPLA6Q8IY17 1366 aa19.49■□□□□ 0.71
COMMD4-215ENST00000566843 GOLGA6L22H0YM25 854 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms