RNA–Protein interactions for RNA: ENST00000566581.5

LPCAT4-206, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 1 (best)

Gene LPCAT4, Length 915 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-206ENST00000566581 RALGAPBQ86X10 1494 aa18.01■□□□□ 0.47
LPCAT4-206ENST00000566581 EVC2Q86UK5 1308 aa18.01■□□□□ 0.47
LPCAT4-206ENST00000566581 CABP2Q9NPB3 220 aa18.01■□□□□ 0.47
LPCAT4-206ENST00000566581 PAK3O75914 559 aaPredicted RBP18■□□□□ 0.47
LPCAT4-206ENST00000566581 CARD11Q9BXL7 1154 aa18■□□□□ 0.47
LPCAT4-206ENST00000566581 SBNO2Q9Y2G9 1366 aa18■□□□□ 0.47
LPCAT4-206ENST00000566581 PPIP5K1Q6PFW1 1433 aa17.99■□□□□ 0.47
LPCAT4-206ENST00000566581 UNC5CLQ8IV45 518 aa17.99■□□□□ 0.47
LPCAT4-206ENST00000566581 PLCH1Q4KWH8 1693 aa17.99■□□□□ 0.47
LPCAT4-206ENST00000566581 BRD4O60885 1362 aaPredicted RBP17.98■□□□□ 0.47
LPCAT4-206ENST00000566581 CLSPNQ9HAW4 1339 aa17.98■□□□□ 0.47
LPCAT4-206ENST00000566581 FAM83GA6ND36 823 aa17.97■□□□□ 0.47
LPCAT4-206ENST00000566581 RGS12O14924 1447 aa17.97■□□□□ 0.47
LPCAT4-206ENST00000566581 GJD4Q96KN9 370 aaPredicted RBP17.96■□□□□ 0.47
LPCAT4-206ENST00000566581 CABP1Q9NZU7 370 aa17.96■□□□□ 0.47
LPCAT4-206ENST00000566581 COL14A1Q05707 1796 aaKnown RBP17.95■□□□□ 0.46
LPCAT4-206ENST00000566581 PLEKHG5O94827 1062 aa17.95■□□□□ 0.46
LPCAT4-206ENST00000566581 TIMELESSQ9UNS1 1208 aa17.95■□□□□ 0.46
LPCAT4-206ENST00000566581 PCGF6Q9BYE7 350 aa17.94■□□□□ 0.46
LPCAT4-206ENST00000566581 PHRF1Q9P1Y6 1649 aaKnown RBP17.94■□□□□ 0.46
LPCAT4-206ENST00000566581 EP400Q96L91 3159 aa17.93■□□□□ 0.46
LPCAT4-206ENST00000566581 AKAP12Q02952 1782 aa17.93■□□□□ 0.46
LPCAT4-206ENST00000566581 VPS72Q15906 364 aa17.92■□□□□ 0.46
LPCAT4-206ENST00000566581 ABTB2Q8N961 1025 aa17.92■□□□□ 0.46
LPCAT4-206ENST00000566581 UPF1Q92900 1129 aaKnown RBP eCLIP17.92■□□□□ 0.46
LPCAT4-206ENST00000566581 ZNF692Q9BU19 519 aaPredicted RBP17.92■□□□□ 0.46
LPCAT4-206ENST00000566581 ATAD2Q6PL18 1390 aa17.91■□□□□ 0.46
LPCAT4-206ENST00000566581 GLI3P10071 1580 aa17.91■□□□□ 0.46
LPCAT4-206ENST00000566581 USP6P35125 1406 aa17.91■□□□□ 0.46
LPCAT4-206ENST00000566581 NRAPQ86VF7 1730 aa17.91■□□□□ 0.46
LPCAT4-206ENST00000566581 NLRP13Q86W25 1043 aa17.9■□□□□ 0.46
LPCAT4-206ENST00000566581 PUS7Q96PZ0 661 aaKnown RBP17.9■□□□□ 0.46
LPCAT4-206ENST00000566581 SSH2Q76I76 1423 aa17.89■□□□□ 0.46
LPCAT4-206ENST00000566581 SLC24A1O60721 1099 aa17.89■□□□□ 0.45
LPCAT4-206ENST00000566581 PRDM11Q9NQV5 511 aa17.89■□□□□ 0.45
LPCAT4-206ENST00000566581 BTG4Q9NY30 223 aa17.89■□□□□ 0.45
LPCAT4-206ENST00000566581 USP19O94966 1318 aa17.89■□□□□ 0.45
LPCAT4-206ENST00000566581 BRWD3Q6RI45 1802 aa17.88■□□□□ 0.45
LPCAT4-206ENST00000566581 ONECUT3O60422 494 aaPredicted RBP17.88■□□□□ 0.45
LPCAT4-206ENST00000566581 NUTM2GQ5VZR2 741 aa17.88■□□□□ 0.45
LPCAT4-206ENST00000566581 CPSF1Q10570 1443 aaKnown RBP17.88■□□□□ 0.45
LPCAT4-206ENST00000566581 KIAA0232Q92628 1395 aa17.87■□□□□ 0.45
LPCAT4-206ENST00000566581 CPDO75976 1380 aa17.86■□□□□ 0.45
LPCAT4-206ENST00000566581 NRKQ7Z2Y5 1582 aa17.86■□□□□ 0.45
LPCAT4-206ENST00000566581 MON2Q7Z3U7 1717 aa17.86■□□□□ 0.45
LPCAT4-206ENST00000566581 ST20-MTHFSA0A0A6YYL1 179 aa17.85■□□□□ 0.45
LPCAT4-206ENST00000566581 GCP02774 474 aa17.85■□□□□ 0.45
LPCAT4-206ENST00000566581 TESK2Q96S53 571 aa17.85■□□□□ 0.45
LPCAT4-206ENST00000566581 PIK3C2AO00443 1686 aa17.84■□□□□ 0.45
LPCAT4-206ENST00000566581 NLRP6P59044 892 aa17.84■□□□□ 0.45
LPCAT4-206ENST00000566581 ZC3H6P61129 1189 aaKnown RBP17.84■□□□□ 0.45
LPCAT4-206ENST00000566581 TTC21BQ7Z4L5 1316 aa17.83■□□□□ 0.44
LPCAT4-206ENST00000566581 TTC21AQ8NDW8 1320 aa17.83■□□□□ 0.44
LPCAT4-206ENST00000566581 CCDC9Q9Y3X0 531 aaKnown RBP17.83■□□□□ 0.44
LPCAT4-206ENST00000566581 KTN1Q86UP2 1357 aaKnown RBP17.82■□□□□ 0.44
LPCAT4-206ENST00000566581 CHRNA2Q15822 529 aa17.82■□□□□ 0.44
LPCAT4-206ENST00000566581 SLIT3O75094 1523 aa17.82■□□□□ 0.44
LPCAT4-206ENST00000566581 LMO7Q8WWI1 1683 aa17.81■□□□□ 0.44
LPCAT4-206ENST00000566581 SPATA31A5Q5VU36 1347 aa17.81■□□□□ 0.44
LPCAT4-206ENST00000566581 SPATA31A7Q8IWB4 1347 aa17.81■□□□□ 0.44
LPCAT4-206ENST00000566581 SEPT12Q8IYM1 358 aa17.81■□□□□ 0.44
LPCAT4-206ENST00000566581 SLC12A5Q9H2X9 1139 aa17.8■□□□□ 0.44
LPCAT4-206ENST00000566581 CD163L1Q9NR16 1453 aa17.8■□□□□ 0.44
LPCAT4-206ENST00000566581 CAMTA1Q9Y6Y1 1673 aa17.8■□□□□ 0.44
LPCAT4-206ENST00000566581 USP47Q96K76 1375 aa17.79■□□□□ 0.44
LPCAT4-206ENST00000566581 NINLQ9Y2I6 1382 aa17.79■□□□□ 0.44
LPCAT4-206ENST00000566581 CCDC125Q86Z20 511 aa17.78■□□□□ 0.44
LPCAT4-206ENST00000566581 CCER1Q8TC90 406 aaPredicted RBP17.78■□□□□ 0.44
LPCAT4-206ENST00000566581 TMC1Q8TDI8 760 aa17.78■□□□□ 0.44
LPCAT4-206ENST00000566581 TERF2IPQ9NYB0 399 aa17.78■□□□□ 0.44
LPCAT4-206ENST00000566581 USP54Q70EL1 1684 aa17.77■□□□□ 0.44
LPCAT4-206ENST00000566581 SPATA31A1Q5TZJ5 1347 aa17.77■□□□□ 0.44
LPCAT4-206ENST00000566581 COL18A1P39060 1754 aa17.77■□□□□ 0.44
LPCAT4-206ENST00000566581 HDGFL2Q7Z4V5 671 aaPredicted RBP17.77■□□□□ 0.44
LPCAT4-206ENST00000566581 KCNH5Q8NCM2 988 aa17.77■□□□□ 0.44
LPCAT4-206ENST00000566581 AATKQ6ZMQ8 1374 aa17.77■□□□□ 0.43
LPCAT4-206ENST00000566581 EVA1CP58658 441 aa17.76■□□□□ 0.43
LPCAT4-206ENST00000566581 FAM98CQ17RN3 349 aaKnown RBP17.76■□□□□ 0.43
LPCAT4-206ENST00000566581 EDC4Q6P2E9 1401 aaKnown RBP17.75■□□□□ 0.43
LPCAT4-206ENST00000566581 THSD7AQ9UPZ6 1657 aa17.75■□□□□ 0.43
LPCAT4-206ENST00000566581 KRT27Q7Z3Y8 459 aa17.75■□□□□ 0.43
LPCAT4-206ENST00000566581 STRN4Q9NRL3 753 aa17.75■□□□□ 0.43
LPCAT4-206ENST00000566581 RGPD5Q99666 1765 aa17.75■□□□□ 0.43
LPCAT4-206ENST00000566581 USP31Q70CQ4 1352 aa17.75■□□□□ 0.43
LPCAT4-206ENST00000566581 TMF1P82094 1093 aa17.74■□□□□ 0.43
LPCAT4-206ENST00000566581 ARHGEF25Q86VW2 580 aa17.73■□□□□ 0.43
LPCAT4-206ENST00000566581 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.73■□□□□ 0.43
LPCAT4-206ENST00000566581 A0A1W2PP64 1363 aa17.73■□□□□ 0.43
LPCAT4-206ENST00000566581 COL5A2P05997 1499 aaPredicted RBP17.72■□□□□ 0.43
LPCAT4-206ENST00000566581 CDCA8Q53HL2 280 aa17.72■□□□□ 0.43
LPCAT4-206ENST00000566581 BARGINQ6ZT62 677 aa17.72■□□□□ 0.43
LPCAT4-206ENST00000566581 A0A0G2JS52 829 aa17.71■□□□□ 0.43
LPCAT4-206ENST00000566581 MYT1Q01538 1121 aa17.71■□□□□ 0.43
LPCAT4-206ENST00000566581 LARP1Q6PKG0 1096 aaKnown RBP17.71■□□□□ 0.43
LPCAT4-206ENST00000566581 THRAP3Q9Y2W1 955 aaKnown RBP17.71■□□□□ 0.43
LPCAT4-206ENST00000566581 NFAT5O94916 1531 aa17.71■□□□□ 0.43
LPCAT4-206ENST00000566581 NME9Q86XW9 330 aa17.69■□□□□ 0.42
LPCAT4-206ENST00000566581 TCP11L2Q8N4U5 519 aa17.69■□□□□ 0.42
LPCAT4-206ENST00000566581 ZRANB1Q9UGI0 708 aa17.69■□□□□ 0.42
LPCAT4-206ENST00000566581 BLMP54132 1417 aaPredicted RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms