RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 FAM83GA6ND36 823 aa21.04■□□□□ 0.96
FANCA-220ENST00000566409 HAP1P54257 671 aaPredicted RBP21.04■□□□□ 0.96
FANCA-220ENST00000566409 GJD4Q96KN9 370 aaPredicted RBP21.04■□□□□ 0.96
FANCA-220ENST00000566409 GLI3P10071 1580 aa21.03■□□□□ 0.96
FANCA-220ENST00000566409 ROCK2O75116 1388 aaKnown RBP21.03■□□□□ 0.96
FANCA-220ENST00000566409 PAK3O75914 559 aaPredicted RBP21.03■□□□□ 0.96
FANCA-220ENST00000566409 CABP2Q9NPB3 220 aa21.03■□□□□ 0.96
FANCA-220ENST00000566409 NWD2Q9ULI1 1742 aa21.03■□□□□ 0.96
FANCA-220ENST00000566409 EP400Q96L91 3159 aa21.02■□□□□ 0.96
FANCA-220ENST00000566409 SRPK2P78362 688 aaKnown RBP21.01■□□□□ 0.95
FANCA-220ENST00000566409 RALGAPBQ86X10 1494 aa21.01■□□□□ 0.95
FANCA-220ENST00000566409 PPIP5K1Q6PFW1 1433 aa20.99■□□□□ 0.95
FANCA-220ENST00000566409 NRAPQ86VF7 1730 aa20.98■□□□□ 0.95
FANCA-220ENST00000566409 VPS72Q15906 364 aa20.97■□□□□ 0.95
FANCA-220ENST00000566409 COL14A1Q05707 1796 aaKnown RBP20.97■□□□□ 0.95
FANCA-220ENST00000566409 PHRF1Q9P1Y6 1649 aaKnown RBP20.96■□□□□ 0.95
FANCA-220ENST00000566409 NUTM2GQ5VZR2 741 aa20.96■□□□□ 0.95
FANCA-220ENST00000566409 TONSLQ96HA7 1378 aa20.96■□□□□ 0.95
FANCA-220ENST00000566409 CABP1Q9NZU7 370 aa20.95■□□□□ 0.94
FANCA-220ENST00000566409 BRWD3Q6RI45 1802 aa20.94■□□□□ 0.94
FANCA-220ENST00000566409 BTG4Q9NY30 223 aa20.94■□□□□ 0.94
FANCA-220ENST00000566409 EVC2Q86UK5 1308 aa20.94■□□□□ 0.94
FANCA-220ENST00000566409 ATAD2Q6PL18 1390 aa20.92■□□□□ 0.94
FANCA-220ENST00000566409 ONECUT3O60422 494 aaPredicted RBP20.91■□□□□ 0.94
FANCA-220ENST00000566409 ABTB2Q8N961 1025 aa20.91■□□□□ 0.94
FANCA-220ENST00000566409 KIAA0232Q92628 1395 aa20.91■□□□□ 0.94
FANCA-220ENST00000566409 CARD11Q9BXL7 1154 aa20.9■□□□□ 0.94
FANCA-220ENST00000566409 PRDM11Q9NQV5 511 aa20.9■□□□□ 0.94
FANCA-220ENST00000566409 USP6P35125 1406 aa20.89■□□□□ 0.94
FANCA-220ENST00000566409 NRKQ7Z2Y5 1582 aa20.89■□□□□ 0.93
FANCA-220ENST00000566409 SSH2Q76I76 1423 aa20.88■□□□□ 0.93
FANCA-220ENST00000566409 USP19O94966 1318 aa20.88■□□□□ 0.93
FANCA-220ENST00000566409 ZC3H6P61129 1189 aaKnown RBP20.88■□□□□ 0.93
FANCA-220ENST00000566409 CHRNA2Q15822 529 aa20.88■□□□□ 0.93
FANCA-220ENST00000566409 SEPT12Q8IYM1 358 aa20.88■□□□□ 0.93
FANCA-220ENST00000566409 CCDC9Q9Y3X0 531 aaKnown RBP20.88■□□□□ 0.93
FANCA-220ENST00000566409 SBNO2Q9Y2G9 1366 aa20.87■□□□□ 0.93
FANCA-220ENST00000566409 AKAP12Q02952 1782 aa20.87■□□□□ 0.93
FANCA-220ENST00000566409 BRD4O60885 1362 aaPredicted RBP20.86■□□□□ 0.93
FANCA-220ENST00000566409 SPATA31A5Q5VU36 1347 aa20.84■□□□□ 0.93
FANCA-220ENST00000566409 SPATA31A7Q8IWB4 1347 aa20.84■□□□□ 0.93
FANCA-220ENST00000566409 PIK3C2AO00443 1686 aa20.84■□□□□ 0.93
FANCA-220ENST00000566409 NLRP13Q86W25 1043 aa20.84■□□□□ 0.93
FANCA-220ENST00000566409 FAM98CQ17RN3 349 aaKnown RBP20.83■□□□□ 0.93
FANCA-220ENST00000566409 CPDO75976 1380 aa20.83■□□□□ 0.92
FANCA-220ENST00000566409 CPSF1Q10570 1443 aaKnown RBP20.82■□□□□ 0.92
FANCA-220ENST00000566409 GCP02774 474 aa20.82■□□□□ 0.92
FANCA-220ENST00000566409 LMO7Q8WWI1 1683 aa20.82■□□□□ 0.92
FANCA-220ENST00000566409 CAMTA1Q9Y6Y1 1673 aa20.82■□□□□ 0.92
FANCA-220ENST00000566409 SLIT3O75094 1523 aa20.8■□□□□ 0.92
FANCA-220ENST00000566409 NLRP6P59044 892 aa20.8■□□□□ 0.92
FANCA-220ENST00000566409 TTC21BQ7Z4L5 1316 aa20.79■□□□□ 0.92
FANCA-220ENST00000566409 KRT27Q7Z3Y8 459 aa20.79■□□□□ 0.92
FANCA-220ENST00000566409 ZNF692Q9BU19 519 aaPredicted RBP20.79■□□□□ 0.92
FANCA-220ENST00000566409 STRN4Q9NRL3 753 aa20.79■□□□□ 0.92
FANCA-220ENST00000566409 CD163L1Q9NR16 1453 aa20.79■□□□□ 0.92
FANCA-220ENST00000566409 SPATA31A1Q5TZJ5 1347 aa20.78■□□□□ 0.92
FANCA-220ENST00000566409 MON2Q7Z3U7 1717 aa20.78■□□□□ 0.92
FANCA-220ENST00000566409 THSD7AQ9UPZ6 1657 aa20.78■□□□□ 0.92
FANCA-220ENST00000566409 TESK2Q96S53 571 aa20.78■□□□□ 0.92
FANCA-220ENST00000566409 CCDC125Q86Z20 511 aa20.77■□□□□ 0.92
FANCA-220ENST00000566409 ST20-MTHFSA0A0A6YYL1 179 aa20.76■□□□□ 0.91
FANCA-220ENST00000566409 KTN1Q86UP2 1357 aaKnown RBP20.75■□□□□ 0.91
FANCA-220ENST00000566409 COL18A1P39060 1754 aa20.75■□□□□ 0.91
FANCA-220ENST00000566409 PCGF6Q9BYE7 350 aa20.75■□□□□ 0.91
FANCA-220ENST00000566409 A0A0G2JS52 829 aa20.74■□□□□ 0.91
FANCA-220ENST00000566409 MYT1Q01538 1121 aa20.74■□□□□ 0.91
FANCA-220ENST00000566409 LARP1Q6PKG0 1096 aaKnown RBP20.74■□□□□ 0.91
FANCA-220ENST00000566409 SLC12A5Q9H2X9 1139 aa20.74■□□□□ 0.91
FANCA-220ENST00000566409 TTC21AQ8NDW8 1320 aa20.74■□□□□ 0.91
FANCA-220ENST00000566409 BLMP54132 1417 aaPredicted RBP20.73■□□□□ 0.91
FANCA-220ENST00000566409 EVA1CP58658 441 aa20.73■□□□□ 0.91
FANCA-220ENST00000566409 COL5A2P05997 1499 aaPredicted RBP20.73■□□□□ 0.91
FANCA-220ENST00000566409 FAM182BQ5T319 152 aa20.72■□□□□ 0.91
FANCA-220ENST00000566409 TMC1Q8TDI8 760 aa20.72■□□□□ 0.91
FANCA-220ENST00000566409 USP35Q9P2H5 1018 aa20.72■□□□□ 0.91
FANCA-220ENST00000566409 ZRANB1Q9UGI0 708 aa20.72■□□□□ 0.91
FANCA-220ENST00000566409 PUS7Q96PZ0 661 aaKnown RBP20.71■□□□□ 0.91
FANCA-220ENST00000566409 AATKQ6ZMQ8 1374 aa20.71■□□□□ 0.91
FANCA-220ENST00000566409 RGPD5Q99666 1765 aa20.7■□□□□ 0.9
FANCA-220ENST00000566409 AXIN2Q9Y2T1 843 aa20.7■□□□□ 0.9
FANCA-220ENST00000566409 SRCAPQ6ZRS2 3230 aa20.7■□□□□ 0.9
FANCA-220ENST00000566409 ZBTB7CA1YPR0 619 aa20.69■□□□□ 0.9
FANCA-220ENST00000566409 DEFB132Q7Z7B7 95 aa20.69■□□□□ 0.9
FANCA-220ENST00000566409 ARHGEF25Q86VW2 580 aa20.69■□□□□ 0.9
FANCA-220ENST00000566409 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.69■□□□□ 0.9
FANCA-220ENST00000566409 NFAT5O94916 1531 aa20.68■□□□□ 0.9
FANCA-220ENST00000566409 USP54Q70EL1 1684 aa20.68■□□□□ 0.9
FANCA-220ENST00000566409 BARGINQ6ZT62 677 aa20.68■□□□□ 0.9
FANCA-220ENST00000566409 NME9Q86XW9 330 aa20.68■□□□□ 0.9
FANCA-220ENST00000566409 CLSPNQ9HAW4 1339 aa20.68■□□□□ 0.9
FANCA-220ENST00000566409 TIMELESSQ9UNS1 1208 aa20.67■□□□□ 0.9
FANCA-220ENST00000566409 A0A1W2PP64 1363 aa20.67■□□□□ 0.9
FANCA-220ENST00000566409 USP31Q70CQ4 1352 aa20.67■□□□□ 0.9
FANCA-220ENST00000566409 USP47Q96K76 1375 aa20.67■□□□□ 0.9
FANCA-220ENST00000566409 SOX12O15370 315 aa20.66■□□□□ 0.9
FANCA-220ENST00000566409 TCP11L2Q8N4U5 519 aa20.66■□□□□ 0.9
FANCA-220ENST00000566409 KCNH5Q8NCM2 988 aa20.66■□□□□ 0.9
FANCA-220ENST00000566409 HDGFL2Q7Z4V5 671 aaPredicted RBP20.65■□□□□ 0.9
FANCA-220ENST00000566409 CRB1P82279 1406 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms