RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 CCDC9Q9Y3X0 531 aaKnown RBP27.47■■□□□ 1.99
ABCA3-204ENST00000566200 NGDNQ8NEJ9 315 aaKnown RBP27.46■■□□□ 1.99
ABCA3-204ENST00000566200 NUDT16Q96DE0 195 aaKnown RBP27.46■■□□□ 1.99
ABCA3-204ENST00000566200 BTG4Q9NY30 223 aa27.44■■□□□ 1.98
ABCA3-204ENST00000566200 PHRF1Q9P1Y6 1649 aaKnown RBP27.43■■□□□ 1.98
ABCA3-204ENST00000566200 SRCAPQ6ZRS2 3230 aa27.42■■□□□ 1.98
ABCA3-204ENST00000566200 PAK3O75914 559 aaPredicted RBP27.42■■□□□ 1.98
ABCA3-204ENST00000566200 ZRANB1Q9UGI0 708 aa27.42■■□□□ 1.98
ABCA3-204ENST00000566200 NBPF1Q3BBV0 1214 aa27.41■■□□□ 1.98
ABCA3-204ENST00000566200 CDK19Q9BWU1 502 aa27.41■■□□□ 1.98
ABCA3-204ENST00000566200 KRT27Q7Z3Y8 459 aa27.39■■□□□ 1.98
ABCA3-204ENST00000566200 DEFB132Q7Z7B7 95 aa27.39■■□□□ 1.98
ABCA3-204ENST00000566200 POLR3AO14802 1390 aaPredicted RBP27.38■■□□□ 1.97
ABCA3-204ENST00000566200 FAM98CQ17RN3 349 aaKnown RBP27.38■■□□□ 1.97
ABCA3-204ENST00000566200 THSD7AQ9UPZ6 1657 aa27.36■■□□□ 1.97
ABCA3-204ENST00000566200 ACEP12821 1306 aa27.35■■□□□ 1.97
ABCA3-204ENST00000566200 SPATA31A5Q5VU36 1347 aa27.35■■□□□ 1.97
ABCA3-204ENST00000566200 SPATA31A7Q8IWB4 1347 aa27.35■■□□□ 1.97
ABCA3-204ENST00000566200 PRDM11Q9NQV5 511 aa27.34■■□□□ 1.97
ABCA3-204ENST00000566200 KIAA0232Q92628 1395 aa27.34■■□□□ 1.97
ABCA3-204ENST00000566200 CCDC61Q9Y6R9 512 aa27.33■■□□□ 1.97
ABCA3-204ENST00000566200 A0A0G2JS52 829 aa27.32■■□□□ 1.96
ABCA3-204ENST00000566200 PLEKHG3A1L390 1219 aa27.32■■□□□ 1.96
ABCA3-204ENST00000566200 MYT1Q01538 1121 aa27.32■■□□□ 1.96
ABCA3-204ENST00000566200 NBPF8Q3BBV2 869 aa27.32■■□□□ 1.96
ABCA3-204ENST00000566200 NUTM2GQ5VZR2 741 aa27.31■■□□□ 1.96
ABCA3-204ENST00000566200 NRKQ7Z2Y5 1582 aa27.31■■□□□ 1.96
ABCA3-204ENST00000566200 QRICH2Q9H0J4 1663 aa27.3■■□□□ 1.96
ABCA3-204ENST00000566200 CHRNA2Q15822 529 aa27.3■■□□□ 1.96
ABCA3-204ENST00000566200 SF3B2Q13435 895 aaKnown RBP27.29■■□□□ 1.96
ABCA3-204ENST00000566200 CENPJQ9HC77 1338 aaPredicted RBP27.26■■□□□ 1.95
ABCA3-204ENST00000566200 ZC3H6P61129 1189 aaKnown RBP27.26■■□□□ 1.95
ABCA3-204ENST00000566200 FAM182BQ5T319 152 aa27.26■■□□□ 1.95
ABCA3-204ENST00000566200 RGPD1P0DJD0 1748 aa27.26■■□□□ 1.95
ABCA3-204ENST00000566200 PPIP5K1Q6PFW1 1433 aa27.25■■□□□ 1.95
ABCA3-204ENST00000566200 SPATA31A1Q5TZJ5 1347 aa27.25■■□□□ 1.95
ABCA3-204ENST00000566200 LMO7Q8WWI1 1683 aa27.24■■□□□ 1.95
ABCA3-204ENST00000566200 L3MBTL2Q969R5 705 aa27.23■■□□□ 1.95
ABCA3-204ENST00000566200 TNS1Q9HBL0 1735 aaKnown RBP27.23■■□□□ 1.95
ABCA3-204ENST00000566200 CAMTA1Q9Y6Y1 1673 aa27.23■■□□□ 1.95
ABCA3-204ENST00000566200 TRPM1Q7Z4N2 1603 aa27.23■■□□□ 1.95
ABCA3-204ENST00000566200 USP19O94966 1318 aa27.22■■□□□ 1.95
ABCA3-204ENST00000566200 SRPK2P78362 688 aaKnown RBP27.22■■□□□ 1.95
ABCA3-204ENST00000566200 CABP2Q9NPB3 220 aa27.22■■□□□ 1.95
ABCA3-204ENST00000566200 STRN4Q9NRL3 753 aa27.22■■□□□ 1.95
ABCA3-204ENST00000566200 ABTB2Q8N961 1025 aa27.21■■□□□ 1.95
ABCA3-204ENST00000566200 SSH2Q76I76 1423 aa27.2■■□□□ 1.94
ABCA3-204ENST00000566200 CPDO75976 1380 aa27.2■■□□□ 1.94
ABCA3-204ENST00000566200 BAG6P46379 1132 aa27.19■■□□□ 1.94
ABCA3-204ENST00000566200 SIN3AQ96ST3 1273 aa27.18■■□□□ 1.94
ABCA3-204ENST00000566200 DISP2A7MBM2 1401 aa27.15■■□□□ 1.94
ABCA3-204ENST00000566200 USP6P35125 1406 aa27.15■■□□□ 1.94
ABCA3-204ENST00000566200 EN1Q05925 392 aaPredicted RBP27.14■■□□□ 1.94
ABCA3-204ENST00000566200 LRP5O75197 1615 aa27.14■■□□□ 1.94
ABCA3-204ENST00000566200 GCP02774 474 aa27.13■■□□□ 1.93
ABCA3-204ENST00000566200 LARP1Q6PKG0 1096 aaKnown RBP27.13■■□□□ 1.93
ABCA3-204ENST00000566200 NLRP13Q86W25 1043 aa27.13■■□□□ 1.93
ABCA3-204ENST00000566200 CABP1Q9NZU7 370 aa27.13■■□□□ 1.93
ABCA3-204ENST00000566200 USP35Q9P2H5 1018 aa27.13■■□□□ 1.93
ABCA3-204ENST00000566200 BRD4O60885 1362 aaPredicted RBP27.12■■□□□ 1.93
ABCA3-204ENST00000566200 PIK3C2AO00443 1686 aa27.12■■□□□ 1.93
ABCA3-204ENST00000566200 SLIT3O75094 1523 aa27.11■■□□□ 1.93
ABCA3-204ENST00000566200 PSDA5PKW4 1024 aaPredicted RBP27.11■■□□□ 1.93
ABCA3-204ENST00000566200 EVA1CP58658 441 aa27.11■■□□□ 1.93
ABCA3-204ENST00000566200 BARGINQ6ZT62 677 aa27.11■■□□□ 1.93
ABCA3-204ENST00000566200 COL5A2P05997 1499 aaPredicted RBP27.1■■□□□ 1.93
ABCA3-204ENST00000566200 AKAP12Q02952 1782 aa27.07■■□□□ 1.92
ABCA3-204ENST00000566200 TRIM37O94972 964 aa27.06■■□□□ 1.92
ABCA3-204ENST00000566200 NEUROD1Q13562 356 aa27.06■■□□□ 1.92
ABCA3-204ENST00000566200 FAM196AQ6ZSG2 479 aa27.06■■□□□ 1.92
ABCA3-204ENST00000566200 PARP4Q9UKK3 1724 aaKnown RBP27.06■■□□□ 1.92
ABCA3-204ENST00000566200 EVC2Q86UK5 1308 aa27.06■■□□□ 1.92
ABCA3-204ENST00000566200 COL18A1P39060 1754 aa27.06■■□□□ 1.92
ABCA3-204ENST00000566200 EZH2Q15910 746 aaKnown RBP27.05■■□□□ 1.92
ABCA3-204ENST00000566200 TCP11L2Q8N4U5 519 aa27.05■■□□□ 1.92
ABCA3-204ENST00000566200 ROCK2O75116 1388 aaKnown RBP27.05■■□□□ 1.92
ABCA3-204ENST00000566200 NLRP6P59044 892 aa27.04■■□□□ 1.92
ABCA3-204ENST00000566200 CAMKK2Q96RR4 588 aa27.03■■□□□ 1.92
ABCA3-204ENST00000566200 AATKQ6ZMQ8 1374 aa27.02■■□□□ 1.92
ABCA3-204ENST00000566200 RREB1Q92766 1687 aa27.01■■□□□ 1.92
ABCA3-204ENST00000566200 CRB1P82279 1406 aa27.01■■□□□ 1.91
ABCA3-204ENST00000566200 THRAP3Q9Y2W1 955 aaKnown RBP27.01■■□□□ 1.91
ABCA3-204ENST00000566200 PDE3BQ13370 1112 aa27■■□□□ 1.91
ABCA3-204ENST00000566200 R3HDM1Q15032 1099 aaKnown RBP26.99■■□□□ 1.91
ABCA3-204ENST00000566200 PEAK1Q9H792 1746 aa26.99■■□□□ 1.91
ABCA3-204ENST00000566200 ZBTB7CA1YPR0 619 aa26.98■■□□□ 1.91
ABCA3-204ENST00000566200 LRRC37A3O60309 1634 aa26.98■■□□□ 1.91
ABCA3-204ENST00000566200 WNK3Q9BYP7 1800 aa26.97■■□□□ 1.91
ABCA3-204ENST00000566200 RGPD5Q99666 1765 aa26.97■■□□□ 1.91
ABCA3-204ENST00000566200 TTC21BQ7Z4L5 1316 aa26.97■■□□□ 1.91
ABCA3-204ENST00000566200 NUP188Q5SRE5 1749 aa26.97■■□□□ 1.91
ABCA3-204ENST00000566200 APBA3O96018 575 aa26.97■■□□□ 1.91
ABCA3-204ENST00000566200 CPSF1Q10570 1443 aaKnown RBP26.97■■□□□ 1.91
ABCA3-204ENST00000566200 AXIN2Q9Y2T1 843 aa26.96■■□□□ 1.91
ABCA3-204ENST00000566200 MON2Q7Z3U7 1717 aa26.96■■□□□ 1.91
ABCA3-204ENST00000566200 PARD3Q8TEW0 1356 aa26.95■■□□□ 1.9
ABCA3-204ENST00000566200 ZNF692Q9BU19 519 aaPredicted RBP26.94■■□□□ 1.9
ABCA3-204ENST00000566200 NFAT5O94916 1531 aa26.93■■□□□ 1.9
ABCA3-204ENST00000566200 SBF2Q86WG5 1849 aa26.93■■□□□ 1.9
ABCA3-204ENST00000566200 ARHGEF25Q86VW2 580 aa26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms