RNA–Protein interactions for RNA: ENST00000566108.2

TNRC6A-211, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 3

Gene TNRC6A, Length 454 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-211ENST00000566108 NBPF1Q3BBV0 1214 aa18.51■□□□□ 0.55
TNRC6A-211ENST00000566108 CCDC61Q9Y6R9 512 aa18.51■□□□□ 0.55
TNRC6A-211ENST00000566108 VPS72Q15906 364 aa18.49■□□□□ 0.55
TNRC6A-211ENST00000566108 RALGAPBQ86X10 1494 aa18.49■□□□□ 0.55
TNRC6A-211ENST00000566108 TOPAZ1Q8N9V7 1692 aa18.48■□□□□ 0.55
TNRC6A-211ENST00000566108 QRICH2Q9H0J4 1663 aa18.48■□□□□ 0.55
TNRC6A-211ENST00000566108 COL14A1Q05707 1796 aaKnown RBP18.47■□□□□ 0.55
TNRC6A-211ENST00000566108 ROCK2O75116 1388 aaKnown RBP18.47■□□□□ 0.55
TNRC6A-211ENST00000566108 SIN3AQ96ST3 1273 aa18.47■□□□□ 0.55
TNRC6A-211ENST00000566108 A0A0G2JS52 829 aa18.46■□□□□ 0.55
TNRC6A-211ENST00000566108 MYT1Q01538 1121 aa18.46■□□□□ 0.55
TNRC6A-211ENST00000566108 PRDM11Q9NQV5 511 aa18.46■□□□□ 0.55
TNRC6A-211ENST00000566108 ACEP12821 1306 aa18.46■□□□□ 0.55
TNRC6A-211ENST00000566108 TRPM1Q7Z4N2 1603 aa18.45■□□□□ 0.54
TNRC6A-211ENST00000566108 POLR3AO14802 1390 aaPredicted RBP18.45■□□□□ 0.54
TNRC6A-211ENST00000566108 CCDC125Q86Z20 511 aa18.45■□□□□ 0.54
TNRC6A-211ENST00000566108 GLI3P10071 1580 aa18.45■□□□□ 0.54
TNRC6A-211ENST00000566108 PPIP5K1Q6PFW1 1433 aa18.44■□□□□ 0.54
TNRC6A-211ENST00000566108 PLEKHG3A1L390 1219 aa18.44■□□□□ 0.54
TNRC6A-211ENST00000566108 FAM83GA6ND36 823 aa18.44■□□□□ 0.54
TNRC6A-211ENST00000566108 NBPF8Q3BBV2 869 aa18.44■□□□□ 0.54
TNRC6A-211ENST00000566108 BTG4Q9NY30 223 aa18.44■□□□□ 0.54
TNRC6A-211ENST00000566108 EVC2Q86UK5 1308 aa18.44■□□□□ 0.54
TNRC6A-211ENST00000566108 ABTB2Q8N961 1025 aa18.42■□□□□ 0.54
TNRC6A-211ENST00000566108 BRD4O60885 1362 aaPredicted RBP18.42■□□□□ 0.54
TNRC6A-211ENST00000566108 TONSLQ96HA7 1378 aa18.42■□□□□ 0.54
TNRC6A-211ENST00000566108 MAPK8IP2Q13387 824 aaPredicted RBP18.41■□□□□ 0.54
TNRC6A-211ENST00000566108 SF3B2Q13435 895 aaKnown RBP18.41■□□□□ 0.54
TNRC6A-211ENST00000566108 SEPT12Q8IYM1 358 aa18.41■□□□□ 0.54
TNRC6A-211ENST00000566108 CABP2Q9NPB3 220 aa18.41■□□□□ 0.54
TNRC6A-211ENST00000566108 CRYBG1Q9Y4K1 1723 aa18.4■□□□□ 0.54
TNRC6A-211ENST00000566108 PHRF1Q9P1Y6 1649 aaKnown RBP18.4■□□□□ 0.54
TNRC6A-211ENST00000566108 NRAPQ86VF7 1730 aa18.4■□□□□ 0.54
TNRC6A-211ENST00000566108 TRIM26Q12899 539 aaPredicted RBP18.39■□□□□ 0.53
TNRC6A-211ENST00000566108 NUTM2GQ5VZR2 741 aa18.39■□□□□ 0.53
TNRC6A-211ENST00000566108 NCBP3Q53F19 620 aaKnown RBP18.38■□□□□ 0.53
TNRC6A-211ENST00000566108 NLRP13Q86W25 1043 aa18.38■□□□□ 0.53
TNRC6A-211ENST00000566108 KIAA0232Q92628 1395 aa18.38■□□□□ 0.53
TNRC6A-211ENST00000566108 BRWD3Q6RI45 1802 aa18.37■□□□□ 0.53
TNRC6A-211ENST00000566108 KRT27Q7Z3Y8 459 aa18.37■□□□□ 0.53
TNRC6A-211ENST00000566108 BLMP54132 1417 aaPredicted RBP18.36■□□□□ 0.53
TNRC6A-211ENST00000566108 ZC3H6P61129 1189 aaKnown RBP18.36■□□□□ 0.53
TNRC6A-211ENST00000566108 FAM98CQ17RN3 349 aaKnown RBP18.36■□□□□ 0.53
TNRC6A-211ENST00000566108 ONECUT3O60422 494 aaPredicted RBP18.35■□□□□ 0.53
TNRC6A-211ENST00000566108 EVA1CP58658 441 aa18.35■□□□□ 0.53
TNRC6A-211ENST00000566108 CARD11Q9BXL7 1154 aa18.35■□□□□ 0.53
TNRC6A-211ENST00000566108 CABP1Q9NZU7 370 aa18.35■□□□□ 0.53
TNRC6A-211ENST00000566108 STRN4Q9NRL3 753 aa18.34■□□□□ 0.53
TNRC6A-211ENST00000566108 SPATA31A5Q5VU36 1347 aa18.33■□□□□ 0.53
TNRC6A-211ENST00000566108 SPATA31A7Q8IWB4 1347 aa18.33■□□□□ 0.53
TNRC6A-211ENST00000566108 CHRNA2Q15822 529 aa18.33■□□□□ 0.52
TNRC6A-211ENST00000566108 ZRANB1Q9UGI0 708 aa18.33■□□□□ 0.52
TNRC6A-211ENST00000566108 NRKQ7Z2Y5 1582 aa18.33■□□□□ 0.52
TNRC6A-211ENST00000566108 USP6P35125 1406 aa18.32■□□□□ 0.52
TNRC6A-211ENST00000566108 ZNF692Q9BU19 519 aaPredicted RBP18.32■□□□□ 0.52
TNRC6A-211ENST00000566108 USP19O94966 1318 aa18.31■□□□□ 0.52
TNRC6A-211ENST00000566108 NLRP6P59044 892 aa18.31■□□□□ 0.52
TNRC6A-211ENST00000566108 CNKSR2Q8WXI2 1034 aa18.31■□□□□ 0.52
TNRC6A-211ENST00000566108 CPDO75976 1380 aa18.3■□□□□ 0.52
TNRC6A-211ENST00000566108 EP400Q96L91 3159 aa18.3■□□□□ 0.52
TNRC6A-211ENST00000566108 ZBTB7CA1YPR0 619 aa18.29■□□□□ 0.52
TNRC6A-211ENST00000566108 GCP02774 474 aa18.29■□□□□ 0.52
TNRC6A-211ENST00000566108 SBNO2Q9Y2G9 1366 aa18.29■□□□□ 0.52
TNRC6A-211ENST00000566108 SPATA31A1Q5TZJ5 1347 aa18.27■□□□□ 0.52
TNRC6A-211ENST00000566108 SSH2Q76I76 1423 aa18.27■□□□□ 0.52
TNRC6A-211ENST00000566108 USP35Q9P2H5 1018 aa18.27■□□□□ 0.52
TNRC6A-211ENST00000566108 SLC24A1O60721 1099 aa18.26■□□□□ 0.51
TNRC6A-211ENST00000566108 BAG6P46379 1132 aa18.26■□□□□ 0.51
TNRC6A-211ENST00000566108 TTC21AQ8NDW8 1320 aa18.25■□□□□ 0.51
TNRC6A-211ENST00000566108 THSD7AQ9UPZ6 1657 aa18.25■□□□□ 0.51
TNRC6A-211ENST00000566108 AKAP12Q02952 1782 aa18.25■□□□□ 0.51
TNRC6A-211ENST00000566108 KCNH5Q8NCM2 988 aa18.25■□□□□ 0.51
TNRC6A-211ENST00000566108 KTN1Q86UP2 1357 aaKnown RBP18.25■□□□□ 0.51
TNRC6A-211ENST00000566108 RGPD1P0DJD0 1748 aa18.24■□□□□ 0.51
TNRC6A-211ENST00000566108 PDE3BQ13370 1112 aa18.24■□□□□ 0.51
TNRC6A-211ENST00000566108 PIK3C2AO00443 1686 aa18.23■□□□□ 0.51
TNRC6A-211ENST00000566108 HDGFL2Q7Z4V5 671 aaPredicted RBP18.23■□□□□ 0.51
TNRC6A-211ENST00000566108 TCP11L2Q8N4U5 519 aa18.23■□□□□ 0.51
TNRC6A-211ENST00000566108 TMC1Q8TDI8 760 aa18.23■□□□□ 0.51
TNRC6A-211ENST00000566108 THRAP3Q9Y2W1 955 aaKnown RBP18.23■□□□□ 0.51
TNRC6A-211ENST00000566108 SLIT3O75094 1523 aa18.23■□□□□ 0.51
TNRC6A-211ENST00000566108 TTC21BQ7Z4L5 1316 aa18.23■□□□□ 0.51
TNRC6A-211ENST00000566108 LMO7Q8WWI1 1683 aa18.22■□□□□ 0.51
TNRC6A-211ENST00000566108 CAMTA1Q9Y6Y1 1673 aa18.22■□□□□ 0.51
TNRC6A-211ENST00000566108 BARGINQ6ZT62 677 aa18.22■□□□□ 0.51
TNRC6A-211ENST00000566108 LARP1Q6PKG0 1096 aaKnown RBP18.21■□□□□ 0.51
TNRC6A-211ENST00000566108 FAM196AQ6ZSG2 479 aa18.21■□□□□ 0.51
TNRC6A-211ENST00000566108 COL5A2P05997 1499 aaPredicted RBP18.2■□□□□ 0.5
TNRC6A-211ENST00000566108 AATKQ6ZMQ8 1374 aa18.2■□□□□ 0.5
TNRC6A-211ENST00000566108 DEFB132Q7Z7B7 95 aa18.2■□□□□ 0.5
TNRC6A-211ENST00000566108 TERF2IPQ9NYB0 399 aa18.2■□□□□ 0.5
TNRC6A-211ENST00000566108 CRB1P82279 1406 aa18.2■□□□□ 0.5
TNRC6A-211ENST00000566108 CPSF1Q10570 1443 aaKnown RBP18.19■□□□□ 0.5
TNRC6A-211ENST00000566108 MON2Q7Z3U7 1717 aa18.19■□□□□ 0.5
TNRC6A-211ENST00000566108 C11orf95C9JLR9 678 aaPredicted RBP18.18■□□□□ 0.5
TNRC6A-211ENST00000566108 SOX12O15370 315 aa18.18■□□□□ 0.5
TNRC6A-211ENST00000566108 TOM1L2Q6ZVM7 507 aa18.18■□□□□ 0.5
TNRC6A-211ENST00000566108 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.17■□□□□ 0.52e-9■□□□□ 10.6
TNRC6A-211ENST00000566108 PUS7Q96PZ0 661 aaKnown RBP18.17■□□□□ 0.5
TNRC6A-211ENST00000566108 NINLQ9Y2I6 1382 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms