RNA–Protein interactions for RNA: ENST00000565788.1

MAP1LC3B-207, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2 BASIC

Gene MAP1LC3B, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-207ENST00000565788 QRICH2Q9H0J4 1663 aa25.14■■□□□ 1.62
MAP1LC3B-207ENST00000565788 CENPJQ9HC77 1338 aaPredicted RBP25.13■■□□□ 1.61
MAP1LC3B-207ENST00000565788 TRPM1Q7Z4N2 1603 aa25.13■■□□□ 1.61
MAP1LC3B-207ENST00000565788 BRWD3Q6RI45 1802 aa25.13■■□□□ 1.61
MAP1LC3B-207ENST00000565788 POLR3AO14802 1390 aaPredicted RBP25.13■■□□□ 1.61
MAP1LC3B-207ENST00000565788 COL14A1Q05707 1796 aaKnown RBP25.13■■□□□ 1.61
MAP1LC3B-207ENST00000565788 CCDC61Q9Y6R9 512 aa25.12■■□□□ 1.61
MAP1LC3B-207ENST00000565788 NEUROD1Q13562 356 aa25.11■■□□□ 1.61
MAP1LC3B-207ENST00000565788 CCDC9Q9Y3X0 531 aaKnown RBP25.11■■□□□ 1.61
MAP1LC3B-207ENST00000565788 ACEP12821 1306 aa25.11■■□□□ 1.61
MAP1LC3B-207ENST00000565788 PHRF1Q9P1Y6 1649 aaKnown RBP25.1■■□□□ 1.61
MAP1LC3B-207ENST00000565788 EP400Q96L91 3159 aa25.09■■□□□ 1.61
MAP1LC3B-207ENST00000565788 PLEKHG3A1L390 1219 aa25.09■■□□□ 1.61
MAP1LC3B-207ENST00000565788 BTG4Q9NY30 223 aa25.08■■□□□ 1.61
MAP1LC3B-207ENST00000565788 SRPK2P78362 688 aaKnown RBP25.07■■□□□ 1.6
MAP1LC3B-207ENST00000565788 NBPF8Q3BBV2 869 aa25.07■■□□□ 1.6
MAP1LC3B-207ENST00000565788 SEPT12Q8IYM1 358 aa25.07■■□□□ 1.6
MAP1LC3B-207ENST00000565788 PPIP5K1Q6PFW1 1433 aa25.06■■□□□ 1.6
MAP1LC3B-207ENST00000565788 CABP2Q9NPB3 220 aa25.06■■□□□ 1.6
MAP1LC3B-207ENST00000565788 NUTM2GQ5VZR2 741 aa25.04■■□□□ 1.6
MAP1LC3B-207ENST00000565788 ONECUT3O60422 494 aaPredicted RBP25.03■■□□□ 1.6
MAP1LC3B-207ENST00000565788 PRDM11Q9NQV5 511 aa25.03■■□□□ 1.6
MAP1LC3B-207ENST00000565788 ROCK2O75116 1388 aaKnown RBP25.02■■□□□ 1.6
MAP1LC3B-207ENST00000565788 KIAA0232Q92628 1395 aa25.02■■□□□ 1.6
MAP1LC3B-207ENST00000565788 CCDC125Q86Z20 511 aa25■■□□□ 1.59
MAP1LC3B-207ENST00000565788 NRKQ7Z2Y5 1582 aa25■■□□□ 1.59
MAP1LC3B-207ENST00000565788 FAM98CQ17RN3 349 aaKnown RBP24.99■■□□□ 1.59
MAP1LC3B-207ENST00000565788 ZC3H6P61129 1189 aaKnown RBP24.98■■□□□ 1.59
MAP1LC3B-207ENST00000565788 CHRNA2Q15822 529 aa24.98■■□□□ 1.59
MAP1LC3B-207ENST00000565788 ABTB2Q8N961 1025 aa24.98■■□□□ 1.59
MAP1LC3B-207ENST00000565788 BLMP54132 1417 aaPredicted RBP24.97■■□□□ 1.59
MAP1LC3B-207ENST00000565788 SPATA31A5Q5VU36 1347 aa24.97■■□□□ 1.59
MAP1LC3B-207ENST00000565788 SPATA31A7Q8IWB4 1347 aa24.97■■□□□ 1.59
MAP1LC3B-207ENST00000565788 A0A0G2JS52 829 aa24.97■■□□□ 1.59
MAP1LC3B-207ENST00000565788 MYT1Q01538 1121 aa24.97■■□□□ 1.59
MAP1LC3B-207ENST00000565788 KRT27Q7Z3Y8 459 aa24.97■■□□□ 1.59
MAP1LC3B-207ENST00000565788 USP19O94966 1318 aa24.95■■□□□ 1.58
MAP1LC3B-207ENST00000565788 EVC2Q86UK5 1308 aa24.95■■□□□ 1.58
MAP1LC3B-207ENST00000565788 CABP1Q9NZU7 370 aa24.95■■□□□ 1.58
MAP1LC3B-207ENST00000565788 USP6P35125 1406 aa24.94■■□□□ 1.58
MAP1LC3B-207ENST00000565788 THSD7AQ9UPZ6 1657 aa24.93■■□□□ 1.58
MAP1LC3B-207ENST00000565788 BRD4O60885 1362 aaPredicted RBP24.92■■□□□ 1.58
MAP1LC3B-207ENST00000565788 STRN4Q9NRL3 753 aa24.91■■□□□ 1.58
MAP1LC3B-207ENST00000565788 LMO7Q8WWI1 1683 aa24.91■■□□□ 1.58
MAP1LC3B-207ENST00000565788 NLRP13Q86W25 1043 aa24.9■■□□□ 1.58
MAP1LC3B-207ENST00000565788 SPATA31A1Q5TZJ5 1347 aa24.89■■□□□ 1.58
MAP1LC3B-207ENST00000565788 CPDO75976 1380 aa24.89■■□□□ 1.57
MAP1LC3B-207ENST00000565788 CAMTA1Q9Y6Y1 1673 aa24.88■■□□□ 1.57
MAP1LC3B-207ENST00000565788 SSH2Q76I76 1423 aa24.88■■□□□ 1.57
MAP1LC3B-207ENST00000565788 DEFB132Q7Z7B7 95 aa24.88■■□□□ 1.57
MAP1LC3B-207ENST00000565788 TONSLQ96HA7 1378 aa24.88■■□□□ 1.57
MAP1LC3B-207ENST00000565788 PIK3C2AO00443 1686 aa24.88■■□□□ 1.57
MAP1LC3B-207ENST00000565788 AKAP12Q02952 1782 aa24.88■■□□□ 1.57
MAP1LC3B-207ENST00000565788 GCP02774 474 aa24.87■■□□□ 1.57
MAP1LC3B-207ENST00000565788 SF3B2Q13435 895 aaKnown RBP24.86■■□□□ 1.57
MAP1LC3B-207ENST00000565788 SLIT3O75094 1523 aa24.86■■□□□ 1.57
MAP1LC3B-207ENST00000565788 CARD11Q9BXL7 1154 aa24.85■■□□□ 1.57
MAP1LC3B-207ENST00000565788 ZRANB1Q9UGI0 708 aa24.85■■□□□ 1.57
MAP1LC3B-207ENST00000565788 EVA1CP58658 441 aa24.84■■□□□ 1.57
MAP1LC3B-207ENST00000565788 NLRP6P59044 892 aa24.84■■□□□ 1.57
MAP1LC3B-207ENST00000565788 FAM182BQ5T319 152 aa24.84■■□□□ 1.57
MAP1LC3B-207ENST00000565788 TRIM26Q12899 539 aaPredicted RBP24.83■■□□□ 1.57
MAP1LC3B-207ENST00000565788 SBNO2Q9Y2G9 1366 aa24.82■■□□□ 1.56
MAP1LC3B-207ENST00000565788 LARP1Q6PKG0 1096 aaKnown RBP24.82■■□□□ 1.56
MAP1LC3B-207ENST00000565788 USP35Q9P2H5 1018 aa24.82■■□□□ 1.56
MAP1LC3B-207ENST00000565788 RGPD1P0DJD0 1748 aa24.81■■□□□ 1.56
MAP1LC3B-207ENST00000565788 COL5A2P05997 1499 aaPredicted RBP24.8■■□□□ 1.56
MAP1LC3B-207ENST00000565788 TTC21BQ7Z4L5 1316 aa24.8■■□□□ 1.56
MAP1LC3B-207ENST00000565788 CPSF1Q10570 1443 aaKnown RBP24.79■■□□□ 1.56
MAP1LC3B-207ENST00000565788 ZBTB7CA1YPR0 619 aa24.79■■□□□ 1.56
MAP1LC3B-207ENST00000565788 ZNF692Q9BU19 519 aaPredicted RBP24.79■■□□□ 1.56
MAP1LC3B-207ENST00000565788 MON2Q7Z3U7 1717 aa24.78■■□□□ 1.56
MAP1LC3B-207ENST00000565788 BARGINQ6ZT62 677 aa24.77■■□□□ 1.56
MAP1LC3B-207ENST00000565788 COL18A1P39060 1754 aa24.77■■□□□ 1.56
MAP1LC3B-207ENST00000565788 TNS1Q9HBL0 1735 aaKnown RBP24.76■■□□□ 1.55
MAP1LC3B-207ENST00000565788 BAG6P46379 1132 aa24.76■■□□□ 1.55
MAP1LC3B-207ENST00000565788 TCP11L2Q8N4U5 519 aa24.75■■□□□ 1.55
MAP1LC3B-207ENST00000565788 TTC21AQ8NDW8 1320 aa24.75■■□□□ 1.55
MAP1LC3B-207ENST00000565788 AATKQ6ZMQ8 1374 aa24.75■■□□□ 1.55
MAP1LC3B-207ENST00000565788 KTN1Q86UP2 1357 aaKnown RBP24.75■■□□□ 1.55
MAP1LC3B-207ENST00000565788 CRB1P82279 1406 aa24.72■■□□□ 1.55
MAP1LC3B-207ENST00000565788 THRAP3Q9Y2W1 955 aaKnown RBP24.72■■□□□ 1.55
MAP1LC3B-207ENST00000565788 CD163L1Q9NR16 1453 aa24.71■■□□□ 1.55
MAP1LC3B-207ENST00000565788 PARP4Q9UKK3 1724 aaKnown RBP24.71■■□□□ 1.55
MAP1LC3B-207ENST00000565788 EN1Q05925 392 aaPredicted RBP24.7■■□□□ 1.54
MAP1LC3B-207ENST00000565788 RGPD5Q99666 1765 aa24.7■■□□□ 1.54
MAP1LC3B-207ENST00000565788 SRCAPQ6ZRS2 3230 aa24.69■■□□□ 1.54
MAP1LC3B-207ENST00000565788 SOX12O15370 315 aa24.69■■□□□ 1.54
MAP1LC3B-207ENST00000565788 PDE3BQ13370 1112 aa24.69■■□□□ 1.54
MAP1LC3B-207ENST00000565788 FAM196AQ6ZSG2 479 aa24.69■■□□□ 1.54
MAP1LC3B-207ENST00000565788 KCNH5Q8NCM2 988 aa24.69■■□□□ 1.54
MAP1LC3B-207ENST00000565788 AXIN2Q9Y2T1 843 aa24.69■■□□□ 1.54
MAP1LC3B-207ENST00000565788 NFAT5O94916 1531 aa24.69■■□□□ 1.54
MAP1LC3B-207ENST00000565788 DISP2A7MBM2 1401 aa24.69■■□□□ 1.54
MAP1LC3B-207ENST00000565788 ARHGEF25Q86VW2 580 aa24.68■■□□□ 1.54
MAP1LC3B-207ENST00000565788 TMC1Q8TDI8 760 aa24.68■■□□□ 1.54
MAP1LC3B-207ENST00000565788 USP54Q70EL1 1684 aa24.67■■□□□ 1.54
MAP1LC3B-207ENST00000565788 TRIM37O94972 964 aa24.67■■□□□ 1.54
MAP1LC3B-207ENST00000565788 WNK3Q9BYP7 1800 aa24.66■■□□□ 1.54
MAP1LC3B-207ENST00000565788 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms