RNA–Protein interactions for RNA: ENST00000565684.5

KIFC3-223, Transcript of kinesin family member C3, human

TSL 5

Gene KIFC3, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC3-223	ENST00000565684	UPF1	Q92900	1129 aa	Known RBP eCLIP	32.53	■■■□□ 2.8
KIFC3-223	ENST00000565684	HAP1	P54257	671 aa	Predicted RBP	32.52	■■■□□ 2.8
KIFC3-223	ENST00000565684	CCDC61	Q9Y6R9	512 aa		32.52	■■■□□ 2.8
KIFC3-223	ENST00000565684	UNC5CL	Q8IV45	518 aa		32.5	■■■□□ 2.79
KIFC3-223	ENST00000565684	COL14A1	Q05707	1796 aa	Known RBP	32.5	■■■□□ 2.79
KIFC3-223	ENST00000565684	ACE	P12821	1306 aa		32.5	■■■□□ 2.79
KIFC3-223	ENST00000565684	PLEKHG3	A1L390	1219 aa		32.49	■■■□□ 2.79
KIFC3-223	ENST00000565684	RALGAPB	Q86X10	1494 aa		32.48	■■■□□ 2.79
KIFC3-223	ENST00000565684	PPIP5K1	Q6PFW1	1433 aa		32.48	■■■□□ 2.79
KIFC3-223	ENST00000565684	EP400	Q96L91	3159 aa		32.48	■■■□□ 2.79
KIFC3-223	ENST00000565684	PAK3	O75914	559 aa	Predicted RBP	32.47	■■■□□ 2.79
KIFC3-223	ENST00000565684	GJD4	Q96KN9	370 aa	Predicted RBP	32.47	■■■□□ 2.79
KIFC3-223	ENST00000565684	CABP2	Q9NPB3	220 aa		32.47	■■■□□ 2.79
KIFC3-223	ENST00000565684	SRPK2	P78362	688 aa	Known RBP	32.46	■■■□□ 2.79
KIFC3-223	ENST00000565684	FAM83G	A6ND36	823 aa		32.44	■■■□□ 2.78
KIFC3-223	ENST00000565684	TONSL	Q96HA7	1378 aa		32.43	■■■□□ 2.78
KIFC3-223	ENST00000565684	BRWD3	Q6RI45	1802 aa		32.42	■■■□□ 2.78
KIFC3-223	ENST00000565684	NRK	Q7Z2Y5	1582 aa		32.4	■■■□□ 2.78
KIFC3-223	ENST00000565684	VPS72	Q15906	364 aa		32.38	■■■□□ 2.77
KIFC3-223	ENST00000565684	AKAP12	Q02952	1782 aa		32.37	■■■□□ 2.77
KIFC3-223	ENST00000565684	ATAD2	Q6PL18	1390 aa		32.36	■■■□□ 2.77
KIFC3-223	ENST00000565684	EVC2	Q86UK5	1308 aa		32.36	■■■□□ 2.77
KIFC3-223	ENST00000565684	NUTM2G	Q5VZR2	741 aa		32.33	■■■□□ 2.77
KIFC3-223	ENST00000565684	CABP1	Q9NZU7	370 aa		32.33	■■■□□ 2.77
KIFC3-223	ENST00000565684	USP6	P35125	1406 aa		32.33	■■■□□ 2.77
KIFC3-223	ENST00000565684	SBNO2	Q9Y2G9	1366 aa		32.32	■■■□□ 2.77
KIFC3-223	ENST00000565684	BTG4	Q9NY30	223 aa		32.32	■■■□□ 2.76
KIFC3-223	ENST00000565684	PIK3C2A	O00443	1686 aa		32.31	■■■□□ 2.76
KIFC3-223	ENST00000565684	KIAA0232	Q92628	1395 aa		32.31	■■■□□ 2.76
KIFC3-223	ENST00000565684	CARD11	Q9BXL7	1154 aa		32.3	■■■□□ 2.76
KIFC3-223	ENST00000565684	USP19	O94966	1318 aa		32.29	■■■□□ 2.76
KIFC3-223	ENST00000565684	SSH2	Q76I76	1423 aa		32.29	■■■□□ 2.76
KIFC3-223	ENST00000565684	BRD4	O60885	1362 aa	Predicted RBP	32.29	■■■□□ 2.76
KIFC3-223	ENST00000565684	ABTB2	Q8N961	1025 aa		32.28	■■■□□ 2.76
KIFC3-223	ENST00000565684	LMO7	Q8WWI1	1683 aa		32.27	■■■□□ 2.76
KIFC3-223	ENST00000565684	PRDM11	Q9NQV5	511 aa		32.27	■■■□□ 2.76
KIFC3-223	ENST00000565684	MON2	Q7Z3U7	1717 aa		32.26	■■■□□ 2.75
KIFC3-223	ENST00000565684	ONECUT3	O60422	494 aa	Predicted RBP	32.25	■■■□□ 2.75
KIFC3-223	ENST00000565684	CCDC9	Q9Y3X0	531 aa	Known RBP	32.25	■■■□□ 2.75
KIFC3-223	ENST00000565684	SLIT3	O75094	1523 aa		32.23	■■■□□ 2.75
KIFC3-223	ENST00000565684	ZC3H6	P61129	1189 aa	Known RBP	32.23	■■■□□ 2.75
KIFC3-223	ENST00000565684	CHRNA2	Q15822	529 aa		32.23	■■■□□ 2.75
KIFC3-223	ENST00000565684	SEPT12	Q8IYM1	358 aa		32.22	■■■□□ 2.75
KIFC3-223	ENST00000565684	THSD7A	Q9UPZ6	1657 aa		32.21	■■■□□ 2.75
KIFC3-223	ENST00000565684	CPD	O75976	1380 aa		32.2	■■■□□ 2.75
KIFC3-223	ENST00000565684	CPSF1	Q10570	1443 aa	Known RBP	32.2	■■■□□ 2.75
KIFC3-223	ENST00000565684	CAMTA1	Q9Y6Y1	1673 aa		32.19	■■■□□ 2.74
KIFC3-223	ENST00000565684	SPATA31A5	Q5VU36	1347 aa		32.19	■■■□□ 2.74
KIFC3-223	ENST00000565684	SPATA31A7	Q8IWB4	1347 aa		32.19	■■■□□ 2.74
KIFC3-223	ENST00000565684	NLRP13	Q86W25	1043 aa		32.18	■■■□□ 2.74
KIFC3-223	ENST00000565684	GC	P02774	474 aa		32.15	■■■□□ 2.74
KIFC3-223	ENST00000565684	FAM98C	Q17RN3	349 aa	Known RBP	32.15	■■■□□ 2.74
KIFC3-223	ENST00000565684	CD163L1	Q9NR16	1453 aa		32.15	■■■□□ 2.74
KIFC3-223	ENST00000565684	COL18A1	P39060	1754 aa		32.12	■■■□□ 2.73
KIFC3-223	ENST00000565684	ZNF692	Q9BU19	519 aa	Predicted RBP	32.12	■■■□□ 2.73
KIFC3-223	ENST00000565684	USP54	Q70EL1	1684 aa		32.11	■■■□□ 2.73
KIFC3-223	ENST00000565684	TTC21B	Q7Z4L5	1316 aa		32.11	■■■□□ 2.73
KIFC3-223	ENST00000565684	NLRP6	P59044	892 aa		32.11	■■■□□ 2.73
KIFC3-223	ENST00000565684	SPATA31A1	Q5TZJ5	1347 aa		32.1	■■■□□ 2.73
KIFC3-223	ENST00000565684	KTN1	Q86UP2	1357 aa	Known RBP	32.09	■■■□□ 2.73
KIFC3-223	ENST00000565684	STRN4	Q9NRL3	753 aa		32.09	■■■□□ 2.73
KIFC3-223	ENST00000565684	KRT27	Q7Z3Y8	459 aa		32.08	■■■□□ 2.73
KIFC3-223	ENST00000565684	TESK2	Q96S53	571 aa		32.08	■■■□□ 2.73
KIFC3-223	ENST00000565684	COL5A2	P05997	1499 aa	Predicted RBP	32.07	■■■□□ 2.72
KIFC3-223	ENST00000565684	BLM	P54132	1417 aa	Predicted RBP	32.07	■■■□□ 2.72
KIFC3-223	ENST00000565684	TTC21A	Q8NDW8	1320 aa		32.06	■■■□□ 2.72
KIFC3-223	ENST00000565684		A0A0G2JS52	829 aa		32.06	■■■□□ 2.72
KIFC3-223	ENST00000565684	MYT1	Q01538	1121 aa		32.06	■■■□□ 2.72
KIFC3-223	ENST00000565684	CCDC125	Q86Z20	511 aa		32.06	■■■□□ 2.72
KIFC3-223	ENST00000565684	RGPD5	Q99666	1765 aa		32.05	■■■□□ 2.72
KIFC3-223	ENST00000565684	ST20-MTHFS	A0A0A6YYL1	179 aa		32.05	■■■□□ 2.72
KIFC3-223	ENST00000565684	NFAT5	O94916	1531 aa		32.05	■■■□□ 2.72
KIFC3-223	ENST00000565684	LARP1	Q6PKG0	1096 aa	Known RBP	32.02	■■■□□ 2.72
KIFC3-223	ENST00000565684	PCGF6	Q9BYE7	350 aa		32.01	■■■□□ 2.71
KIFC3-223	ENST00000565684	AATK	Q6ZMQ8	1374 aa		32.01	■■■□□ 2.71
KIFC3-223	ENST00000565684	CLSPN	Q9HAW4	1339 aa		32	■■■□□ 2.71
KIFC3-223	ENST00000565684	PUS7	Q96PZ0	661 aa	Known RBP	32	■■■□□ 2.71
KIFC3-223	ENST00000565684	SLC12A5	Q9H2X9	1139 aa		32	■■■□□ 2.71
KIFC3-223	ENST00000565684	EVA1C	P58658	441 aa		31.99	■■■□□ 2.71
KIFC3-223	ENST00000565684	WNK3	Q9BYP7	1800 aa		31.98	■■■□□ 2.71
KIFC3-223	ENST00000565684	RGPD1	P0DJD0	1748 aa		31.98	■■■□□ 2.71
KIFC3-223	ENST00000565684	USP47	Q96K76	1375 aa		31.98	■■■□□ 2.71
KIFC3-223	ENST00000565684	TMC1	Q8TDI8	760 aa		31.98	■■■□□ 2.71
KIFC3-223	ENST00000565684	PARP4	Q9UKK3	1724 aa	Known RBP	31.97	■■■□□ 2.71
KIFC3-223	ENST00000565684		A0A1W2PP64	1363 aa		31.97	■■■□□ 2.71
KIFC3-223	ENST00000565684	TNS1	Q9HBL0	1735 aa	Known RBP	31.97	■■■□□ 2.71
KIFC3-223	ENST00000565684	USP31	Q70CQ4	1352 aa		31.96	■■■□□ 2.71
KIFC3-223	ENST00000565684	EDC4	Q6P2E9	1401 aa	Known RBP	31.96	■■■□□ 2.71
KIFC3-223	ENST00000565684	USP35	Q9P2H5	1018 aa		31.96	■■■□□ 2.71
KIFC3-223	ENST00000565684	ZRANB1	Q9UGI0	708 aa		31.96	■■■□□ 2.71
KIFC3-223	ENST00000565684	ZBTB7C	A1YPR0	619 aa		31.95	■■■□□ 2.71
KIFC3-223	ENST00000565684	FAM182B	Q5T319	152 aa		31.95	■■■□□ 2.71
KIFC3-223	ENST00000565684	BARGIN	Q6ZT62	677 aa		31.95	■■■□□ 2.71
KIFC3-223	ENST00000565684	LTN1	O94822	1766 aa		31.94	■■■□□ 2.7
KIFC3-223	ENST00000565684	CRB1	P82279	1406 aa		31.94	■■■□□ 2.7
KIFC3-223	ENST00000565684	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	31.94	■■■□□ 2.7	3e-7	■■□□□ 13.5
KIFC3-223	ENST00000565684	ARHGEF25	Q86VW2	580 aa		31.93	■■■□□ 2.7
KIFC3-223	ENST00000565684	KCNH5	Q8NCM2	988 aa		31.93	■■■□□ 2.7
KIFC3-223	ENST00000565684	TIMELESS	Q9UNS1	1208 aa		31.93	■■■□□ 2.7
KIFC3-223	ENST00000565684	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	31.92	■■■□□ 2.7

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms