RNA–Protein interactions for RNA: ENST00000565639.6

PKD1-230, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 1,976 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-230ENST00000565639 RBM33Q96EV2 1170 aaKnown RBP25.76■■□□□ 1.71
PKD1-230ENST00000565639 C14orf37Q86TY3 774 aa25.75■■□□□ 1.71
PKD1-230ENST00000565639 NGDNQ8NEJ9 315 aaKnown RBP25.75■■□□□ 1.71
PKD1-230ENST00000565639 PMFBP1Q8TBY8 1022 aa25.75■■□□□ 1.71
PKD1-230ENST00000565639 TTC21AQ8NDW8 1320 aa25.74■■□□□ 1.71
PKD1-230ENST00000565639 STRCP1A6NGW2 1772 aa25.74■■□□□ 1.71
PKD1-230ENST00000565639 COG3Q96JB2 828 aa25.73■■□□□ 1.71
PKD1-230ENST00000565639 SHPRHQ149N8 1683 aa25.72■■□□□ 1.71
PKD1-230ENST00000565639 AATKQ6ZMQ8 1374 aa25.71■■□□□ 1.71
PKD1-230ENST00000565639 C19orf44Q9H6X5 657 aa25.71■■□□□ 1.71
PKD1-230ENST00000565639 PHF8Q9UPP1 1060 aa25.69■■□□□ 1.7
PKD1-230ENST00000565639 OVOS2A0A0J9YW53 1432 aa25.68■■□□□ 1.7
PKD1-230ENST00000565639 TMEM94Q12767 1356 aa25.68■■□□□ 1.7
PKD1-230ENST00000565639 OVOS2Q6IE36 1432 aa25.68■■□□□ 1.7
PKD1-230ENST00000565639 PNPLA6Q8IY17 1366 aa25.68■■□□□ 1.7
PKD1-230ENST00000565639 DCCP43146 1447 aa25.67■■□□□ 1.7
PKD1-230ENST00000565639 ZRANB1Q9UGI0 708 aa25.67■■□□□ 1.7
PKD1-230ENST00000565639 COL3A1P02461 1466 aaPredicted RBP25.66■■□□□ 1.7
PKD1-230ENST00000565639 SMG6Q86US8 1419 aaKnown RBP25.66■■□□□ 1.7
PKD1-230ENST00000565639 POLKQ9UBT6 870 aa25.65■■□□□ 1.7
PKD1-230ENST00000565639 USP31Q70CQ4 1352 aa25.64■■□□□ 1.7
PKD1-230ENST00000565639 GTF3C3Q9Y5Q9 886 aa25.64■■□□□ 1.7
PKD1-230ENST00000565639 MAP2P11137 1827 aaKnown RBP25.64■■□□□ 1.69
PKD1-230ENST00000565639 ESCO1Q5FWF5 840 aa25.63■■□□□ 1.69
PKD1-230ENST00000565639 NUDCQ9Y266 331 aa25.62■■□□□ 1.69
PKD1-230ENST00000565639 C1orf167Q5SNV9 1468 aa25.6■■□□□ 1.69
PKD1-230ENST00000565639 CDK12Q9NYV4 1490 aaPredicted RBP25.6■■□□□ 1.69
PKD1-230ENST00000565639 PDE3BQ13370 1112 aa25.6■■□□□ 1.69
PKD1-230ENST00000565639 PIK3C2AO00443 1686 aa25.59■■□□□ 1.69
PKD1-230ENST00000565639 ATF3P18847 181 aa25.59■■□□□ 1.69
PKD1-230ENST00000565639 NGEFQ8N5V2 710 aa25.59■■□□□ 1.69
PKD1-230ENST00000565639 DMRT2Q9Y5R5 561 aa25.59■■□□□ 1.69
PKD1-230ENST00000565639 USP54Q70EL1 1684 aa25.59■■□□□ 1.69
PKD1-230ENST00000565639 DIAPH1O60610 1272 aaKnown RBP25.58■■□□□ 1.69
PKD1-230ENST00000565639 KIF1AQ12756 1690 aa25.57■■□□□ 1.68
PKD1-230ENST00000565639 SENP3-EIF4A1A0A087X0R7 540 aa25.57■■□□□ 1.68
PKD1-230ENST00000565639 FBLN1P23142 703 aa25.57■■□□□ 1.68
PKD1-230ENST00000565639 EMILIN1Q9Y6C2 1016 aa25.56■■□□□ 1.68
PKD1-230ENST00000565639 MST1RQ04912 1400 aa25.56■■□□□ 1.68
PKD1-230ENST00000565639 CADPS2Q86UW7 1296 aa25.56■■□□□ 1.68
PKD1-230ENST00000565639 CCDC146Q8IYE0 955 aa25.56■■□□□ 1.68
PKD1-230ENST00000565639 ORAI2Q96SN7 254 aa25.56■■□□□ 1.68
PKD1-230ENST00000565639 LRRC7Q96NW7 1537 aa25.56■■□□□ 1.68
PKD1-230ENST00000565639 MSH6P52701 1360 aa25.56■■□□□ 1.68
PKD1-230ENST00000565639 XIRP1Q702N8 1843 aaKnown RBP25.55■■□□□ 1.68
PKD1-230ENST00000565639 RUNDC1Q96C34 613 aa25.55■■□□□ 1.68
PKD1-230ENST00000565639 U2AF1L5P0DN76 240 aaPredicted RBP25.54■■□□□ 1.68
PKD1-230ENST00000565639 U2AF1Q01081 240 aaKnown RBP eCLIP25.54■■□□□ 1.68
PKD1-230ENST00000565639 PSME1Q06323 249 aa25.54■■□□□ 1.68
PKD1-230ENST00000565639 SALL2Q9Y467 1007 aaPredicted RBP25.54■■□□□ 1.68
PKD1-230ENST00000565639 PPM1GO15355 546 aaPredicted RBP25.53■■□□□ 1.68
PKD1-230ENST00000565639 ZNF335Q9H4Z2 1342 aaPredicted RBP25.53■■□□□ 1.68
PKD1-230ENST00000565639 APAF1O14727 1248 aa25.52■■□□□ 1.68
PKD1-230ENST00000565639 NLRP6P59044 892 aa25.52■■□□□ 1.68
PKD1-230ENST00000565639 RRS1Q15050 365 aaKnown RBP25.52■■□□□ 1.68
PKD1-230ENST00000565639 ABTB2Q8N961 1025 aa25.51■■□□□ 1.67
PKD1-230ENST00000565639 ZNF521Q96K83 1311 aa25.5■■□□□ 1.67
PKD1-230ENST00000565639 U2SURPO15042 1029 aaKnown RBP25.5■■□□□ 1.67
PKD1-230ENST00000565639 PAK3O75914 559 aaPredicted RBP25.5■■□□□ 1.67
PKD1-230ENST00000565639 MARF1Q9Y4F3 1742 aaKnown RBP25.49■■□□□ 1.67
PKD1-230ENST00000565639 NCBP3Q53F19 620 aaKnown RBP25.49■■□□□ 1.67
PKD1-230ENST00000565639 FOXO3O43524 673 aa25.48■■□□□ 1.67
PKD1-230ENST00000565639 IQSEC2Q5JU85 1478 aa25.48■■□□□ 1.67
PKD1-230ENST00000565639 PNNQ9H307 717 aaKnown RBP25.47■■□□□ 1.67
PKD1-230ENST00000565639 IL13P35225 146 aa25.47■■□□□ 1.67
PKD1-230ENST00000565639 TRPM3Q9HCF6 1732 aaPredicted RBP25.44■■□□□ 1.66
PKD1-230ENST00000565639 FCHSD2O94868 740 aa25.44■■□□□ 1.66
PKD1-230ENST00000565639 TCP11L2Q8N4U5 519 aa25.44■■□□□ 1.66
PKD1-230ENST00000565639 KIF24Q5T7B8 1368 aa25.44■■□□□ 1.66
PKD1-230ENST00000565639 PEAK1Q9H792 1746 aa25.44■■□□□ 1.66
PKD1-230ENST00000565639 PLEKHF1Q96S99 279 aa25.44■■□□□ 1.66
PKD1-230ENST00000565639 SBNO1A3KN83 1393 aa25.44■■□□□ 1.66
PKD1-230ENST00000565639 MAP3K19Q56UN5 1328 aa25.43■■□□□ 1.66
PKD1-230ENST00000565639 KRT28Q7Z3Y7 464 aa25.43■■□□□ 1.66
PKD1-230ENST00000565639 FLT4P35916 1363 aa25.42■■□□□ 1.66
PKD1-230ENST00000565639 NUTM2GQ5VZR2 741 aa25.42■■□□□ 1.66
PKD1-230ENST00000565639 GOLGA2Q08379 1002 aa25.41■■□□□ 1.66
PKD1-230ENST00000565639 CDCA7LQ96GN5 454 aa25.41■■□□□ 1.66
PKD1-230ENST00000565639 SUPT16HQ9Y5B9 1047 aaKnown RBP25.41■■□□□ 1.66
PKD1-230ENST00000565639 SOX12O15370 315 aa25.4■■□□□ 1.66
PKD1-230ENST00000565639 CCDC27Q2M243 656 aa25.4■■□□□ 1.66
PKD1-230ENST00000565639 PHF23Q9BUL5 403 aaPredicted RBP25.4■■□□□ 1.66
PKD1-230ENST00000565639 NEFLP07196 543 aa25.38■■□□□ 1.65
PKD1-230ENST00000565639 RSPH6AQ9H0K4 717 aa25.38■■□□□ 1.65
PKD1-230ENST00000565639 NPHP3Q7Z494 1330 aa25.38■■□□□ 1.65
PKD1-230ENST00000565639 MAPK8IP3Q9UPT6 1336 aa25.38■■□□□ 1.65
PKD1-230ENST00000565639 EIF4A2Q14240 407 aaKnown RBP25.38■■□□□ 1.65
PKD1-230ENST00000565639 KCNH5Q8NCM2 988 aa25.38■■□□□ 1.65
PKD1-230ENST00000565639 XPCQ01831 940 aaPredicted RBP25.37■■□□□ 1.65
PKD1-230ENST00000565639 WWC1Q8IX03 1113 aa25.37■■□□□ 1.65
PKD1-230ENST00000565639 HSP90AB2PQ58FF8 381 aa25.36■■□□□ 1.65
PKD1-230ENST00000565639 NFAT5O94916 1531 aa25.36■■□□□ 1.65
PKD1-230ENST00000565639 AMPHP49418 695 aa25.36■■□□□ 1.65
PKD1-230ENST00000565639 RTL1A6NKG5 1358 aa25.35■■□□□ 1.65
PKD1-230ENST00000565639 SLIT3O75094 1523 aa25.35■■□□□ 1.65
PKD1-230ENST00000565639 ALS2Q96Q42 1657 aa25.35■■□□□ 1.65
PKD1-230ENST00000565639 USP19O94966 1318 aa25.34■■□□□ 1.65
PKD1-230ENST00000565639 SLFN5Q08AF3 891 aa25.34■■□□□ 1.65
PKD1-230ENST00000565639 NEFMP07197 916 aa25.33■■□□□ 1.65
PKD1-230ENST00000565639 PRKAR2BP31323 418 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms