RNA–Protein interactions for RNA: ENST00000565296.5

CCNDBP1-206, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-206ENST00000565296 TERF2IPQ9NYB0 399 aa19.26■□□□□ 0.67
CCNDBP1-206ENST00000565296 KTN1Q86UP2 1357 aaKnown RBP19.26■□□□□ 0.67
CCNDBP1-206ENST00000565296 ZNF316A6NFI3 1004 aaPredicted RBP19.25■□□□□ 0.67
CCNDBP1-206ENST00000565296 PAK3O75914 559 aaPredicted RBP19.25■□□□□ 0.67
CCNDBP1-206ENST00000565296 ANKRD36BQ8N2N9 1353 aa19.25■□□□□ 0.67
CCNDBP1-206ENST00000565296 CCDC7Q96M83 1385 aa19.25■□□□□ 0.67
CCNDBP1-206ENST00000565296 HDGFL2Q7Z4V5 671 aaPredicted RBP19.25■□□□□ 0.67
CCNDBP1-206ENST00000565296 AKAP12Q02952 1782 aa19.24■□□□□ 0.67
CCNDBP1-206ENST00000565296 BRD4O60885 1362 aaPredicted RBP19.23■□□□□ 0.67
CCNDBP1-206ENST00000565296 TTC21BQ7Z4L5 1316 aa19.23■□□□□ 0.67
CCNDBP1-206ENST00000565296 LMOD2Q6P5Q4 547 aa19.23■□□□□ 0.67
CCNDBP1-206ENST00000565296 CARD14Q9BXL6 1004 aa19.23■□□□□ 0.67
CCNDBP1-206ENST00000565296 ALS2Q96Q42 1657 aa19.22■□□□□ 0.67
CCNDBP1-206ENST00000565296 ARHGEF10O15013 1369 aa19.21■□□□□ 0.67
CCNDBP1-206ENST00000565296 SHPRHQ149N8 1683 aa19.21■□□□□ 0.67
CCNDBP1-206ENST00000565296 NRKQ7Z2Y5 1582 aa19.21■□□□□ 0.67
CCNDBP1-206ENST00000565296 MON2Q7Z3U7 1717 aa19.21■□□□□ 0.67
CCNDBP1-206ENST00000565296 EDC4Q6P2E9 1401 aaKnown RBP19.2■□□□□ 0.66
CCNDBP1-206ENST00000565296 NUTM2GQ5VZR2 741 aa19.2■□□□□ 0.66
CCNDBP1-206ENST00000565296 ABTB2Q8N961 1025 aa19.2■□□□□ 0.66
CCNDBP1-206ENST00000565296 COL22A1Q8NFW1 1626 aaPredicted RBP19.2■□□□□ 0.66
CCNDBP1-206ENST00000565296 SPATA31A6Q5VVP1 1343 aa19.19■□□□□ 0.66
CCNDBP1-206ENST00000565296 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.19■□□□□ 0.66
CCNDBP1-206ENST00000565296 CABLES1Q8TDN4 633 aa19.19■□□□□ 0.66
CCNDBP1-206ENST00000565296 PANK3Q9H999 370 aa19.19■□□□□ 0.66
CCNDBP1-206ENST00000565296 TTC21AQ8NDW8 1320 aa19.18■□□□□ 0.66
CCNDBP1-206ENST00000565296 LRP6O75581 1613 aa19.17■□□□□ 0.66
CCNDBP1-206ENST00000565296 PLEKHG5O94827 1062 aa19.17■□□□□ 0.66
CCNDBP1-206ENST00000565296 NME9Q86XW9 330 aa19.17■□□□□ 0.66
CCNDBP1-206ENST00000565296 ZRANB1Q9UGI0 708 aa19.17■□□□□ 0.66
CCNDBP1-206ENST00000565296 PIK3C2AO00443 1686 aa19.17■□□□□ 0.66
CCNDBP1-206ENST00000565296 NUTM2BA6NNL0 878 aaPredicted RBP19.16■□□□□ 0.66
CCNDBP1-206ENST00000565296 NUTM2EB1AL46 878 aaPredicted RBP19.16■□□□□ 0.66
CCNDBP1-206ENST00000565296 NUTM2AQ8IVF1 878 aaPredicted RBP19.16■□□□□ 0.66
CCNDBP1-206ENST00000565296 MED1Q15648 1581 aaPredicted RBP19.16■□□□□ 0.66
CCNDBP1-206ENST00000565296 NSD3Q9BZ95 1437 aa19.15■□□□□ 0.66
CCNDBP1-206ENST00000565296 NLRP6P59044 892 aa19.14■□□□□ 0.65
CCNDBP1-206ENST00000565296 USP19O94966 1318 aa19.14■□□□□ 0.65
CCNDBP1-206ENST00000565296 USP31Q70CQ4 1352 aa19.13■□□□□ 0.65
CCNDBP1-206ENST00000565296 FYB1O15117 783 aa19.13■□□□□ 0.65
CCNDBP1-206ENST00000565296 NLRP13Q86W25 1043 aa19.13■□□□□ 0.65
CCNDBP1-206ENST00000565296 PER1O15534 1290 aaPredicted RBP19.11■□□□□ 0.65
CCNDBP1-206ENST00000565296 ADAMTS2O95450 1211 aa19.11■□□□□ 0.65
CCNDBP1-206ENST00000565296 CRYBG1Q9Y4K1 1723 aa19.11■□□□□ 0.65
CCNDBP1-206ENST00000565296 OVOS2A0A0J9YW53 1432 aa19.1■□□□□ 0.65
CCNDBP1-206ENST00000565296 OVOS2Q6IE36 1432 aa19.1■□□□□ 0.65
CCNDBP1-206ENST00000565296 ABCA3Q99758 1704 aa19.09■□□□□ 0.65
CCNDBP1-206ENST00000565296 MARF1Q9Y4F3 1742 aaKnown RBP19.09■□□□□ 0.65
CCNDBP1-206ENST00000565296 GCP02774 474 aa19.09■□□□□ 0.65
CCNDBP1-206ENST00000565296 GGNBP2Q9H3C7 697 aa19.09■□□□□ 0.65
CCNDBP1-206ENST00000565296 SLIT3O75094 1523 aa19.08■□□□□ 0.65
CCNDBP1-206ENST00000565296 CGNL1Q0VF96 1302 aa19.07■□□□□ 0.64
CCNDBP1-206ENST00000565296 CENPBP07199 599 aaPredicted RBP19.07■□□□□ 0.64
CCNDBP1-206ENST00000565296 HAP1P54257 671 aaPredicted RBP19.07■□□□□ 0.64
CCNDBP1-206ENST00000565296 PHRF1Q9P1Y6 1649 aaKnown RBP19.06■□□□□ 0.64
CCNDBP1-206ENST00000565296 USP54Q70EL1 1684 aa19.06■□□□□ 0.64
CCNDBP1-206ENST00000565296 AMER1Q5JTC6 1135 aaPredicted RBP19.06■□□□□ 0.64
CCNDBP1-206ENST00000565296 ZC3H6P61129 1189 aaKnown RBP19.05■□□□□ 0.64
CCNDBP1-206ENST00000565296 C8orf37Q96NL8 207 aa19.05■□□□□ 0.64
CCNDBP1-206ENST00000565296 KNSTRNQ9Y448 316 aa19.05■□□□□ 0.64
CCNDBP1-206ENST00000565296 KIAA0232Q92628 1395 aa19.05■□□□□ 0.64
CCNDBP1-206ENST00000565296 FAM83GA6ND36 823 aa19.04■□□□□ 0.64
CCNDBP1-206ENST00000565296 MEX3CQ5U5Q3 659 aaKnown RBP19.04■□□□□ 0.64
CCNDBP1-206ENST00000565296 COG3Q96JB2 828 aa19.04■□□□□ 0.64
CCNDBP1-206ENST00000565296 SOX12O15370 315 aa19.04■□□□□ 0.64
CCNDBP1-206ENST00000565296 NFAT5O94916 1531 aa19.04■□□□□ 0.64
CCNDBP1-206ENST00000565296 CPDO75976 1380 aa19.03■□□□□ 0.64
CCNDBP1-206ENST00000565296 FBLN1P23142 703 aa19.02■□□□□ 0.64
CCNDBP1-206ENST00000565296 DDX10Q13206 875 aaKnown RBP19.02■□□□□ 0.64
CCNDBP1-206ENST00000565296 KCNH5Q8NCM2 988 aa19.02■□□□□ 0.64
CCNDBP1-206ENST00000565296 NGLY1Q96IV0 654 aa19.01■□□□□ 0.63
CCNDBP1-206ENST00000565296 CHRNA2Q15822 529 aa19■□□□□ 0.63
CCNDBP1-206ENST00000565296 ARHGEF25Q86VW2 580 aa19■□□□□ 0.63
CCNDBP1-206ENST00000565296 FNBP4Q8N3X1 1017 aaPredicted RBP19■□□□□ 0.63
CCNDBP1-206ENST00000565296 PRDM11Q9NQV5 511 aa19■□□□□ 0.63
CCNDBP1-206ENST00000565296 RGS17Q9UGC6 210 aaPredicted RBP19■□□□□ 0.63
CCNDBP1-206ENST00000565296 KIF20BQ96Q89 1820 aa19■□□□□ 0.63
CCNDBP1-206ENST00000565296 NSD2O96028 1365 aa18.99■□□□□ 0.63
CCNDBP1-206ENST00000565296 AFF2P51816 1311 aa18.98■□□□□ 0.63
CCNDBP1-206ENST00000565296 SLIT2O94813 1529 aa18.98■□□□□ 0.63
CCNDBP1-206ENST00000565296 BCL9LQ86UU0 1499 aa18.97■□□□□ 0.63
CCNDBP1-206ENST00000565296 NPC1L1Q9UHC9 1359 aa18.97■□□□□ 0.63
CCNDBP1-206ENST00000565296 CC2D1BQ5T0F9 858 aaKnown RBP18.97■□□□□ 0.63
CCNDBP1-206ENST00000565296 AATKQ6ZMQ8 1374 aa18.96■□□□□ 0.62
CCNDBP1-206ENST00000565296 ZBTB7CA1YPR0 619 aa18.95■□□□□ 0.62
CCNDBP1-206ENST00000565296 MYT1Q01538 1121 aa18.95■□□□□ 0.62
CCNDBP1-206ENST00000565296 BTG4Q9NY30 223 aa18.95■□□□□ 0.62
CCNDBP1-206ENST00000565296 AXIN2Q9Y2T1 843 aa18.95■□□□□ 0.62
CCNDBP1-206ENST00000565296 MAP3K19Q56UN5 1328 aa18.95■□□□□ 0.62
CCNDBP1-206ENST00000565296 RRS1Q15050 365 aaKnown RBP18.95■□□□□ 0.62
CCNDBP1-206ENST00000565296 USP21Q9UK80 565 aa18.95■□□□□ 0.62
CCNDBP1-206ENST00000565296 TNNT2P45379 298 aaPredicted RBP18.94■□□□□ 0.62
CCNDBP1-206ENST00000565296 MORC1Q86VD1 984 aa18.94■□□□□ 0.62
CCNDBP1-206ENST00000565296 COL14A1Q05707 1796 aaKnown RBP18.94■□□□□ 0.62
CCNDBP1-206ENST00000565296 CAMTA1Q9Y6Y1 1673 aa18.94■□□□□ 0.62
CCNDBP1-206ENST00000565296 CNGB1Q14028 1251 aaPredicted RBP18.93■□□□□ 0.62
CCNDBP1-206ENST00000565296 LMO7Q8WWI1 1683 aa18.93■□□□□ 0.62
CCNDBP1-206ENST00000565296 ANKRD26Q9UPS8 1709 aa18.92■□□□□ 0.62
CCNDBP1-206ENST00000565296 COL18A1P39060 1754 aa18.92■□□□□ 0.62
CCNDBP1-206ENST00000565296 UNC5CLQ8IV45 518 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms