RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 BTG4Q9NY30 223 aa27.44■■□□□ 1.98
NME3-207ENST00000564628 KDM2AQ9Y2K7 1162 aa27.43■■□□□ 1.98
NME3-207ENST00000564628 CRYBG1Q9Y4K1 1723 aa27.41■■□□□ 1.98
NME3-207ENST00000564628 A0A0G2JS52 829 aa27.39■■□□□ 1.98
NME3-207ENST00000564628 MYT1Q01538 1121 aa27.39■■□□□ 1.98
NME3-207ENST00000564628 FAM98CQ17RN3 349 aaKnown RBP27.39■■□□□ 1.98
NME3-207ENST00000564628 NGDNQ8NEJ9 315 aaKnown RBP27.39■■□□□ 1.98
NME3-207ENST00000564628 ITSN1Q15811 1721 aa27.37■■□□□ 1.97
NME3-207ENST00000564628 ARHGEF28Q8N1W1 1705 aaKnown RBP27.37■■□□□ 1.97
NME3-207ENST00000564628 ATP7BP35670 1465 aa27.36■■□□□ 1.97
NME3-207ENST00000564628 SPATA31A5Q5VU36 1347 aa27.36■■□□□ 1.97
NME3-207ENST00000564628 SPATA31A7Q8IWB4 1347 aa27.36■■□□□ 1.97
NME3-207ENST00000564628 BAG6P46379 1132 aa27.35■■□□□ 1.97
NME3-207ENST00000564628 PAK3O75914 559 aaPredicted RBP27.34■■□□□ 1.97
NME3-207ENST00000564628 LRP5O75197 1615 aa27.33■■□□□ 1.97
NME3-207ENST00000564628 KIAA1210Q9ULL0 1709 aa27.33■■□□□ 1.96
NME3-207ENST00000564628 NUDT16Q96DE0 195 aaKnown RBP27.32■■□□□ 1.96
NME3-207ENST00000564628 PRDM11Q9NQV5 511 aa27.32■■□□□ 1.96
NME3-207ENST00000564628 THSD7AQ9UPZ6 1657 aa27.32■■□□□ 1.96
NME3-207ENST00000564628 SIN3AQ96ST3 1273 aa27.31■■□□□ 1.96
NME3-207ENST00000564628 RGPD1P0DJD0 1748 aa27.3■■□□□ 1.96
NME3-207ENST00000564628 KIAA0232Q92628 1395 aa27.27■■□□□ 1.96
NME3-207ENST00000564628 PCGF6Q9BYE7 350 aa27.27■■□□□ 1.96
NME3-207ENST00000564628 PHRF1Q9P1Y6 1649 aaKnown RBP27.27■■□□□ 1.96
NME3-207ENST00000564628 DISP2A7MBM2 1401 aa27.26■■□□□ 1.95
NME3-207ENST00000564628 POLR3AO14802 1390 aaPredicted RBP27.26■■□□□ 1.95
NME3-207ENST00000564628 SPATA31A1Q5TZJ5 1347 aa27.25■■□□□ 1.95
NME3-207ENST00000564628 TOPAZ1Q8N9V7 1692 aa27.25■■□□□ 1.95
NME3-207ENST00000564628 CDK19Q9BWU1 502 aa27.25■■□□□ 1.95
NME3-207ENST00000564628 L3MBTL2Q969R5 705 aa27.23■■□□□ 1.95
NME3-207ENST00000564628 CCDC61Q9Y6R9 512 aa27.23■■□□□ 1.95
NME3-207ENST00000564628 EN1Q05925 392 aaPredicted RBP27.22■■□□□ 1.95
NME3-207ENST00000564628 FAM182BQ5T319 152 aa27.22■■□□□ 1.95
NME3-207ENST00000564628 ACEP12821 1306 aa27.21■■□□□ 1.95
NME3-207ENST00000564628 PSDA5PKW4 1024 aaPredicted RBP27.21■■□□□ 1.95
NME3-207ENST00000564628 TNS1Q9HBL0 1735 aaKnown RBP27.21■■□□□ 1.95
NME3-207ENST00000564628 PLEKHG3A1L390 1219 aa27.2■■□□□ 1.94
NME3-207ENST00000564628 NEUROD1Q13562 356 aa27.2■■□□□ 1.94
NME3-207ENST00000564628 CHRNA2Q15822 529 aa27.2■■□□□ 1.94
NME3-207ENST00000564628 NBPF8Q3BBV2 869 aa27.2■■□□□ 1.94
NME3-207ENST00000564628 ZC3H6P61129 1189 aaKnown RBP27.18■■□□□ 1.94
NME3-207ENST00000564628 STRN4Q9NRL3 753 aa27.18■■□□□ 1.94
NME3-207ENST00000564628 FAM196AQ6ZSG2 479 aa27.17■■□□□ 1.94
NME3-207ENST00000564628 TRPM1Q7Z4N2 1603 aa27.16■■□□□ 1.94
NME3-207ENST00000564628 NUTM2GQ5VZR2 741 aa27.16■■□□□ 1.94
NME3-207ENST00000564628 NRKQ7Z2Y5 1582 aa27.16■■□□□ 1.94
NME3-207ENST00000564628 SSH2Q76I76 1423 aa27.16■■□□□ 1.94
NME3-207ENST00000564628 CPDO75976 1380 aa27.15■■□□□ 1.94
NME3-207ENST00000564628 BARGINQ6ZT62 677 aa27.15■■□□□ 1.94
NME3-207ENST00000564628 USP19O94966 1318 aa27.14■■□□□ 1.93
NME3-207ENST00000564628 ABTB2Q8N961 1025 aa27.13■■□□□ 1.93
NME3-207ENST00000564628 PARD3Q8TEW0 1356 aa27.12■■□□□ 1.93
NME3-207ENST00000564628 EVA1CP58658 441 aa27.12■■□□□ 1.93
NME3-207ENST00000564628 LMO7Q8WWI1 1683 aa27.11■■□□□ 1.93
NME3-207ENST00000564628 CAMTA1Q9Y6Y1 1673 aa27.11■■□□□ 1.93
NME3-207ENST00000564628 EZH2Q15910 746 aaKnown RBP27.11■■□□□ 1.93
NME3-207ENST00000564628 CAMKK2Q96RR4 588 aa27.11■■□□□ 1.93
NME3-207ENST00000564628 TRIM37O94972 964 aa27.1■■□□□ 1.93
NME3-207ENST00000564628 R3HDM1Q15032 1099 aaKnown RBP27.1■■□□□ 1.93
NME3-207ENST00000564628 NBPF1Q3BBV0 1214 aa27.1■■□□□ 1.93
NME3-207ENST00000564628 USP35Q9P2H5 1018 aa27.1■■□□□ 1.93
NME3-207ENST00000564628 BRD4O60885 1362 aaPredicted RBP27.09■■□□□ 1.93
NME3-207ENST00000564628 PPIP5K1Q6PFW1 1433 aa27.08■■□□□ 1.93
NME3-207ENST00000564628 PDE3BQ13370 1112 aa27.08■■□□□ 1.93
NME3-207ENST00000564628 TONSLQ96HA7 1378 aa27.08■■□□□ 1.93
NME3-207ENST00000564628 LARP1Q6PKG0 1096 aaKnown RBP27.07■■□□□ 1.92
NME3-207ENST00000564628 NLRP13Q86W25 1043 aa27.07■■□□□ 1.92
NME3-207ENST00000564628 TCP11L2Q8N4U5 519 aa27.07■■□□□ 1.92
NME3-207ENST00000564628 CLSPNQ9HAW4 1339 aa27.07■■□□□ 1.92
NME3-207ENST00000564628 CENPJQ9HC77 1338 aaPredicted RBP27.07■■□□□ 1.92
NME3-207ENST00000564628 SRPK2P78362 688 aaKnown RBP27.06■■□□□ 1.92
NME3-207ENST00000564628 THRAP3Q9Y2W1 955 aaKnown RBP27.06■■□□□ 1.92
NME3-207ENST00000564628 APBA3O96018 575 aa27.05■■□□□ 1.92
NME3-207ENST00000564628 GCP02774 474 aa27.05■■□□□ 1.92
NME3-207ENST00000564628 COL5A2P05997 1499 aaPredicted RBP27.02■■□□□ 1.92
NME3-207ENST00000564628 RREB1Q92766 1687 aa27.01■■□□□ 1.92
NME3-207ENST00000564628 CABP2Q9NPB3 220 aa27.01■■□□□ 1.91
NME3-207ENST00000564628 PARP4Q9UKK3 1724 aaKnown RBP27■■□□□ 1.91
NME3-207ENST00000564628 QRICH2Q9H0J4 1663 aa27■■□□□ 1.91
NME3-207ENST00000564628 C11orf95C9JLR9 678 aaPredicted RBP26.99■■□□□ 1.91
NME3-207ENST00000564628 USP6P35125 1406 aa26.99■■□□□ 1.91
NME3-207ENST00000564628 CRB1P82279 1406 aa26.98■■□□□ 1.91
NME3-207ENST00000564628 NUP188Q5SRE5 1749 aa26.96■■□□□ 1.91
NME3-207ENST00000564628 SLIT3O75094 1523 aa26.96■■□□□ 1.91
NME3-207ENST00000564628 CABP1Q9NZU7 370 aa26.96■■□□□ 1.91
NME3-207ENST00000564628 AATKQ6ZMQ8 1374 aa26.96■■□□□ 1.91
NME3-207ENST00000564628 ROCK2O75116 1388 aaKnown RBP26.95■■□□□ 1.9
NME3-207ENST00000564628 NLRP6P59044 892 aa26.94■■□□□ 1.9
NME3-207ENST00000564628 NBPF14Q5TI25 921 aa26.94■■□□□ 1.9
NME3-207ENST00000564628 OVOS2A0A0G2JMS6 1433 aa26.9■■□□□ 1.9
NME3-207ENST00000564628 OVOS2A0A0J9YW53 1432 aa26.9■■□□□ 1.9
NME3-207ENST00000564628 OVOS2Q6IE36 1432 aa26.9■■□□□ 1.9
NME3-207ENST00000564628 PEAK1Q9H792 1746 aa26.9■■□□□ 1.9
NME3-207ENST00000564628 EVC2Q86UK5 1308 aa26.9■■□□□ 1.9
NME3-207ENST00000564628 PIK3C2AO00443 1686 aa26.89■■□□□ 1.9
NME3-207ENST00000564628 LRRC37A3O60309 1634 aa26.88■■□□□ 1.89
NME3-207ENST00000564628 TIMELESSQ9UNS1 1208 aa26.88■■□□□ 1.89
NME3-207ENST00000564628 RGPD3A6NKT7 1758 aaPredicted RBP26.87■■□□□ 1.89
NME3-207ENST00000564628 COL18A1P39060 1754 aa26.87■■□□□ 1.89
NME3-207ENST00000564628 RGPD4Q7Z3J3 1758 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms