RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 AKAP12Q02952 1782 aa17.28■□□□□ 0.36
KARS-204ENST00000564578 TRPM3Q9HCF6 1732 aaPredicted RBP17.28■□□□□ 0.36
KARS-204ENST00000564578 HDGFL2Q7Z4V5 671 aaPredicted RBP17.27■□□□□ 0.36
KARS-204ENST00000564578 PAK3O75914 559 aaPredicted RBP17.26■□□□□ 0.35
KARS-204ENST00000564578 PANK3Q9H999 370 aa17.25■□□□□ 0.35
KARS-204ENST00000564578 TTC21BQ7Z4L5 1316 aa17.25■□□□□ 0.35
KARS-204ENST00000564578 BRD4O60885 1362 aaPredicted RBP17.25■□□□□ 0.35
KARS-204ENST00000564578 MON2Q7Z3U7 1717 aa17.25■□□□□ 0.35
KARS-204ENST00000564578 TNS3Q68CZ2 1445 aa17.25■□□□□ 0.35
KARS-204ENST00000564578 PNPLA6Q8IY17 1366 aa17.24■□□□□ 0.35
KARS-204ENST00000564578 EDC4Q6P2E9 1401 aaKnown RBP17.24■□□□□ 0.35
KARS-204ENST00000564578 NRKQ7Z2Y5 1582 aa17.24■□□□□ 0.35
KARS-204ENST00000564578 ALS2Q96Q42 1657 aa17.23■□□□□ 0.35
KARS-204ENST00000564578 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.23■□□□□ 0.35
KARS-204ENST00000564578 JCADQ9P266 1359 aa17.23■□□□□ 0.35
KARS-204ENST00000564578 LMOD2Q6P5Q4 547 aa17.22■□□□□ 0.35
KARS-204ENST00000564578 ABTB2Q8N961 1025 aa17.22■□□□□ 0.35
KARS-204ENST00000564578 ZNF316A6NFI3 1004 aaPredicted RBP17.21■□□□□ 0.35
KARS-204ENST00000564578 ARHGEF10O15013 1369 aa17.21■□□□□ 0.35
KARS-204ENST00000564578 TTC21AQ8NDW8 1320 aa17.21■□□□□ 0.35
KARS-204ENST00000564578 PER1O15534 1290 aaPredicted RBP17.21■□□□□ 0.35
KARS-204ENST00000564578 NUTM2GQ5VZR2 741 aa17.21■□□□□ 0.35
KARS-204ENST00000564578 NME9Q86XW9 330 aa17.2■□□□□ 0.34
KARS-204ENST00000564578 ZRANB1Q9UGI0 708 aa17.2■□□□□ 0.34
KARS-204ENST00000564578 NSD3Q9BZ95 1437 aa17.2■□□□□ 0.34
KARS-204ENST00000564578 CABLES1Q8TDN4 633 aa17.19■□□□□ 0.34
KARS-204ENST00000564578 FYB1O15117 783 aa17.19■□□□□ 0.34
KARS-204ENST00000564578 PIK3C2AO00443 1686 aa17.19■□□□□ 0.34
KARS-204ENST00000564578 SHPRHQ149N8 1683 aa17.19■□□□□ 0.34
KARS-204ENST00000564578 NLRP6P59044 892 aa17.18■□□□□ 0.34
KARS-204ENST00000564578 COL22A1Q8NFW1 1626 aaPredicted RBP17.18■□□□□ 0.34
KARS-204ENST00000564578 MED1Q15648 1581 aaPredicted RBP17.16■□□□□ 0.34
KARS-204ENST00000564578 PLEKHG5O94827 1062 aa17.16■□□□□ 0.34
KARS-204ENST00000564578 NLRP13Q86W25 1043 aa17.16■□□□□ 0.34
KARS-204ENST00000564578 USP31Q70CQ4 1352 aa17.16■□□□□ 0.34
KARS-204ENST00000564578 USP19O94966 1318 aa17.16■□□□□ 0.34
KARS-204ENST00000564578 SPATA31A6Q5VVP1 1343 aa17.16■□□□□ 0.34
KARS-204ENST00000564578 DDX10Q13206 875 aaKnown RBP17.15■□□□□ 0.34
KARS-204ENST00000564578 GGNBP2Q9H3C7 697 aa17.15■□□□□ 0.34
KARS-204ENST00000564578 AMER1Q5JTC6 1135 aaPredicted RBP17.14■□□□□ 0.33
KARS-204ENST00000564578 OVOS2A0A0J9YW53 1432 aa17.14■□□□□ 0.33
KARS-204ENST00000564578 OVOS2Q6IE36 1432 aa17.14■□□□□ 0.33
KARS-204ENST00000564578 CGNL1Q0VF96 1302 aa17.14■□□□□ 0.33
KARS-204ENST00000564578 KNSTRNQ9Y448 316 aa17.13■□□□□ 0.33
KARS-204ENST00000564578 MARF1Q9Y4F3 1742 aaKnown RBP17.13■□□□□ 0.33
KARS-204ENST00000564578 LRP6O75581 1613 aa17.13■□□□□ 0.33
KARS-204ENST00000564578 NUTM2BA6NNL0 878 aaPredicted RBP17.13■□□□□ 0.33
KARS-204ENST00000564578 NUTM2EB1AL46 878 aaPredicted RBP17.13■□□□□ 0.33
KARS-204ENST00000564578 NUTM2AQ8IVF1 878 aaPredicted RBP17.13■□□□□ 0.33
KARS-204ENST00000564578 CRYBG1Q9Y4K1 1723 aa17.12■□□□□ 0.33
KARS-204ENST00000564578 GCP02774 474 aa17.12■□□□□ 0.33
KARS-204ENST00000564578 SLIT3O75094 1523 aa17.11■□□□□ 0.33
KARS-204ENST00000564578 COG3Q96JB2 828 aa17.1■□□□□ 0.33
KARS-204ENST00000564578 USP54Q70EL1 1684 aa17.1■□□□□ 0.33
KARS-204ENST00000564578 ABCA3Q99758 1704 aa17.1■□□□□ 0.33
KARS-204ENST00000564578 ADAMTS2O95450 1211 aa17.09■□□□□ 0.33
KARS-204ENST00000564578 FBLN1P23142 703 aa17.09■□□□□ 0.33
KARS-204ENST00000564578 PHRF1Q9P1Y6 1649 aaKnown RBP17.08■□□□□ 0.33
KARS-204ENST00000564578 SOX12O15370 315 aa17.08■□□□□ 0.32
KARS-204ENST00000564578 ZC3H6P61129 1189 aaKnown RBP17.08■□□□□ 0.32
KARS-204ENST00000564578 KIF20BQ96Q89 1820 aa17.07■□□□□ 0.32
KARS-204ENST00000564578 HAP1P54257 671 aaPredicted RBP17.07■□□□□ 0.32
KARS-204ENST00000564578 KCNH5Q8NCM2 988 aa17.07■□□□□ 0.32
KARS-204ENST00000564578 NSD2O96028 1365 aa17.07■□□□□ 0.32
KARS-204ENST00000564578 NPC1L1Q9UHC9 1359 aa17.07■□□□□ 0.32
KARS-204ENST00000564578 FAM83GA6ND36 823 aa17.06■□□□□ 0.32
KARS-204ENST00000564578 NFAT5O94916 1531 aa17.06■□□□□ 0.32
KARS-204ENST00000564578 KIAA0232Q92628 1395 aa17.06■□□□□ 0.32
KARS-204ENST00000564578 CC2D1BQ5T0F9 858 aaKnown RBP17.06■□□□□ 0.32
KARS-204ENST00000564578 CPDO75976 1380 aa17.05■□□□□ 0.32
KARS-204ENST00000564578 ARHGEF25Q86VW2 580 aa17.05■□□□□ 0.32
KARS-204ENST00000564578 CNGB1Q14028 1251 aaPredicted RBP17.03■□□□□ 0.32
KARS-204ENST00000564578 CHRNA2Q15822 529 aa17.03■□□□□ 0.32
KARS-204ENST00000564578 MORC1Q86VD1 984 aa17.02■□□□□ 0.32
KARS-204ENST00000564578 C8orf37Q96NL8 207 aa17.02■□□□□ 0.32
KARS-204ENST00000564578 PRDM11Q9NQV5 511 aa17.02■□□□□ 0.32
KARS-204ENST00000564578 ANKRD26Q9UPS8 1709 aa17.02■□□□□ 0.31
KARS-204ENST00000564578 TNNT2P45379 298 aaPredicted RBP17.02■□□□□ 0.31
KARS-204ENST00000564578 MAP3K19Q56UN5 1328 aa17.01■□□□□ 0.31
KARS-204ENST00000564578 RRS1Q15050 365 aaKnown RBP17.01■□□□□ 0.31
KARS-204ENST00000564578 MEX3CQ5U5Q3 659 aaKnown RBP17.01■□□□□ 0.31
KARS-204ENST00000564578 FNBP4Q8N3X1 1017 aaPredicted RBP17.01■□□□□ 0.31
KARS-204ENST00000564578 NGLY1Q96IV0 654 aa17■□□□□ 0.31
KARS-204ENST00000564578 AXIN2Q9Y2T1 843 aa17■□□□□ 0.31
KARS-204ENST00000564578 AATKQ6ZMQ8 1374 aa17■□□□□ 0.31
KARS-204ENST00000564578 SLIT2O94813 1529 aa16.99■□□□□ 0.31
KARS-204ENST00000564578 POLKQ9UBT6 870 aa16.99■□□□□ 0.31
KARS-204ENST00000564578 ZBTB7CA1YPR0 619 aa16.98■□□□□ 0.31
KARS-204ENST00000564578 BTG4Q9NY30 223 aa16.98■□□□□ 0.31
KARS-204ENST00000564578 RGS17Q9UGC6 210 aaPredicted RBP16.98■□□□□ 0.31
KARS-204ENST00000564578 EMILIN1Q9Y6C2 1016 aa16.98■□□□□ 0.31
KARS-204ENST00000564578 BCL9LQ86UU0 1499 aa16.98■□□□□ 0.31
KARS-204ENST00000564578 CAMTA1Q9Y6Y1 1673 aa16.98■□□□□ 0.31
KARS-204ENST00000564578 COL18A1P39060 1754 aa16.98■□□□□ 0.31
KARS-204ENST00000564578 AFF2P51816 1311 aa16.97■□□□□ 0.31
KARS-204ENST00000564578 LMO7Q8WWI1 1683 aa16.97■□□□□ 0.31
KARS-204ENST00000564578 COL14A1Q05707 1796 aaKnown RBP16.96■□□□□ 0.31
KARS-204ENST00000564578 PARD3Q8TEW0 1356 aa16.96■□□□□ 0.31
KARS-204ENST00000564578 IP6K1Q92551 441 aa16.96■□□□□ 0.3
KARS-204ENST00000564578 LTN1O94822 1766 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms