RNA–Protein interactions for RNA: ENST00000563920.1

CBFA2T3-206, Transcript of CBFA2/RUNX1 translocation partner 3, humanhuman

TSL 2

Gene CBFA2T3, Length 1,815 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFA2T3-206ENST00000563920 TMEM94Q12767 1356 aa23.5■■□□□ 1.35
CBFA2T3-206ENST00000563920 TTC21BQ7Z4L5 1316 aa23.5■■□□□ 1.35
CBFA2T3-206ENST00000563920 ADAMTS8Q9UP79 889 aa23.49■■□□□ 1.35
CBFA2T3-206ENST00000563920 NGDNQ8NEJ9 315 aaKnown RBP23.47■■□□□ 1.35
CBFA2T3-206ENST00000563920 BLMP54132 1417 aaPredicted RBP23.47■■□□□ 1.35
CBFA2T3-206ENST00000563920 MAP2P11137 1827 aaKnown RBP23.46■■□□□ 1.35
CBFA2T3-206ENST00000563920 ZNF335Q9H4Z2 1342 aaPredicted RBP23.46■■□□□ 1.35
CBFA2T3-206ENST00000563920 PIK3C2AO00443 1686 aa23.44■■□□□ 1.34
CBFA2T3-206ENST00000563920 PHF8Q9UPP1 1060 aa23.44■■□□□ 1.34
CBFA2T3-206ENST00000563920 ZBED9Q6R2W3 1325 aa23.44■■□□□ 1.34
CBFA2T3-206ENST00000563920 ORAI2Q96SN7 254 aa23.43■■□□□ 1.34
CBFA2T3-206ENST00000563920 COL3A1P02461 1466 aaPredicted RBP23.43■■□□□ 1.34
CBFA2T3-206ENST00000563920 C19orf44Q9H6X5 657 aa23.43■■□□□ 1.34
CBFA2T3-206ENST00000563920 MARF1Q9Y4F3 1742 aaKnown RBP23.42■■□□□ 1.34
CBFA2T3-206ENST00000563920 OVOS2A0A0J9YW53 1432 aa23.42■■□□□ 1.34
CBFA2T3-206ENST00000563920 OVOS2Q6IE36 1432 aa23.42■■□□□ 1.34
CBFA2T3-206ENST00000563920 WDR43Q15061 677 aaKnown RBP eCLIP23.41■■□□□ 1.34
CBFA2T3-206ENST00000563920 ESCO1Q5FWF5 840 aa23.41■■□□□ 1.34
CBFA2T3-206ENST00000563920 LRRC7Q96NW7 1537 aa23.4■■□□□ 1.34
CBFA2T3-206ENST00000563920 INSRP06213 1382 aa23.4■■□□□ 1.34
CBFA2T3-206ENST00000563920 COG3Q96JB2 828 aa23.4■■□□□ 1.34
CBFA2T3-206ENST00000563920 POLKQ9UBT6 870 aa23.4■■□□□ 1.34
CBFA2T3-206ENST00000563920 C1orf167Q5SNV9 1468 aa23.4■■□□□ 1.34
CBFA2T3-206ENST00000563920 SCAF1Q9H7N4 1312 aaKnown RBP23.38■■□□□ 1.33
CBFA2T3-206ENST00000563920 MST1RQ04912 1400 aa23.38■■□□□ 1.33
CBFA2T3-206ENST00000563920 EMILIN1Q9Y6C2 1016 aa23.38■■□□□ 1.33
CBFA2T3-206ENST00000563920 NCOA3Q9Y6Q9 1424 aa23.37■■□□□ 1.33
CBFA2T3-206ENST00000563920 TTC21AQ8NDW8 1320 aa23.37■■□□□ 1.33
CBFA2T3-206ENST00000563920 CCDC146Q8IYE0 955 aa23.36■■□□□ 1.33
CBFA2T3-206ENST00000563920 SALL2Q9Y467 1007 aaPredicted RBP23.36■■□□□ 1.33
CBFA2T3-206ENST00000563920 RRS1Q15050 365 aaKnown RBP23.35■■□□□ 1.33
CBFA2T3-206ENST00000563920 PNPLA6Q8IY17 1366 aa23.35■■□□□ 1.33
CBFA2T3-206ENST00000563920 CFAP53Q96M91 514 aa23.34■■□□□ 1.33
CBFA2T3-206ENST00000563920 AATKQ6ZMQ8 1374 aa23.34■■□□□ 1.33
CBFA2T3-206ENST00000563920 SMG6Q86US8 1419 aaKnown RBP23.34■■□□□ 1.33
CBFA2T3-206ENST00000563920 DCCP43146 1447 aa23.33■■□□□ 1.33
CBFA2T3-206ENST00000563920 NUTM2GQ5VZR2 741 aa23.33■■□□□ 1.33
CBFA2T3-206ENST00000563920 PEAK1Q9H792 1746 aa23.33■■□□□ 1.33
CBFA2T3-206ENST00000563920 USP31Q70CQ4 1352 aa23.33■■□□□ 1.32
CBFA2T3-206ENST00000563920 USP54Q70EL1 1684 aa23.32■■□□□ 1.32
CBFA2T3-206ENST00000563920 PPM1GO15355 546 aaPredicted RBP23.32■■□□□ 1.32
CBFA2T3-206ENST00000563920 ATF3P18847 181 aa23.32■■□□□ 1.32
CBFA2T3-206ENST00000563920 XPCQ01831 940 aaPredicted RBP23.32■■□□□ 1.32
CBFA2T3-206ENST00000563920 FOXO3O43524 673 aa23.31■■□□□ 1.32
CBFA2T3-206ENST00000563920 TRPM3Q9HCF6 1732 aaPredicted RBP23.31■■□□□ 1.32
CBFA2T3-206ENST00000563920 KIF1AQ12756 1690 aa23.31■■□□□ 1.32
CBFA2T3-206ENST00000563920 PAK3O75914 559 aaPredicted RBP23.3■■□□□ 1.32
CBFA2T3-206ENST00000563920 SOX12O15370 315 aa23.29■■□□□ 1.32
CBFA2T3-206ENST00000563920 PSME1Q06323 249 aa23.29■■□□□ 1.32
CBFA2T3-206ENST00000563920 MSH6P52701 1360 aa23.29■■□□□ 1.32
CBFA2T3-206ENST00000563920 CDK12Q9NYV4 1490 aaPredicted RBP23.28■■□□□ 1.32
CBFA2T3-206ENST00000563920 DDX17Q92841 729 aaKnown RBP23.28■■□□□ 1.32
CBFA2T3-206ENST00000563920 NLRP6P59044 892 aa23.27■■□□□ 1.32
CBFA2T3-206ENST00000563920 ABTB2Q8N961 1025 aa23.26■■□□□ 1.31
CBFA2T3-206ENST00000563920 GTF3C3Q9Y5Q9 886 aa23.26■■□□□ 1.31
CBFA2T3-206ENST00000563920 CADPS2Q86UW7 1296 aa23.26■■□□□ 1.31
CBFA2T3-206ENST00000563920 APAF1O14727 1248 aa23.25■■□□□ 1.31
CBFA2T3-206ENST00000563920 DIAPH1O60610 1272 aaKnown RBP23.25■■□□□ 1.31
CBFA2T3-206ENST00000563920 U2AF1L5P0DN76 240 aaPredicted RBP23.25■■□□□ 1.31
CBFA2T3-206ENST00000563920 U2AF1Q01081 240 aaKnown RBP eCLIP23.25■■□□□ 1.31
CBFA2T3-206ENST00000563920 DMRT2Q9Y5R5 561 aa23.25■■□□□ 1.31
CBFA2T3-206ENST00000563920 U2SURPO15042 1029 aaKnown RBP23.24■■□□□ 1.31
CBFA2T3-206ENST00000563920 IQSEC2Q5JU85 1478 aa23.23■■□□□ 1.31
CBFA2T3-206ENST00000563920 KRT28Q7Z3Y7 464 aa23.22■■□□□ 1.31
CBFA2T3-206ENST00000563920 MAP3K19Q56UN5 1328 aa23.22■■□□□ 1.31
CBFA2T3-206ENST00000563920 IL13P35225 146 aa23.22■■□□□ 1.31
CBFA2T3-206ENST00000563920 CDCA7LQ96GN5 454 aa23.21■■□□□ 1.31
CBFA2T3-206ENST00000563920 ALS2Q96Q42 1657 aa23.2■■□□□ 1.3
CBFA2T3-206ENST00000563920 RUNDC1Q96C34 613 aa23.19■■□□□ 1.3
CBFA2T3-206ENST00000563920 PLEKHF1Q96S99 279 aa23.19■■□□□ 1.3
CBFA2T3-206ENST00000563920 NUDCQ9Y266 331 aa23.19■■□□□ 1.3
CBFA2T3-206ENST00000563920 ZNF521Q96K83 1311 aa23.19■■□□□ 1.3
CBFA2T3-206ENST00000563920 NFAT5O94916 1531 aa23.18■■□□□ 1.3
CBFA2T3-206ENST00000563920 HSP90AB2PQ58FF8 381 aa23.18■■□□□ 1.3
CBFA2T3-206ENST00000563920 LTN1O94822 1766 aa23.17■■□□□ 1.3
CBFA2T3-206ENST00000563920 BRINP3Q76B58 766 aa23.17■■□□□ 1.3
CBFA2T3-206ENST00000563920 RRP7AQ9Y3A4 280 aaKnown RBP23.17■■□□□ 1.3
CBFA2T3-206ENST00000563920 LTBP4Q8N2S1 1624 aa23.17■■□□□ 1.3
CBFA2T3-206ENST00000563920 EIF4A2Q14240 407 aaKnown RBP23.16■■□□□ 1.3
CBFA2T3-206ENST00000563920 TCP11L2Q8N4U5 519 aa23.16■■□□□ 1.3
CBFA2T3-206ENST00000563920 PXDNQ92626 1479 aa23.15■■□□□ 1.3
CBFA2T3-206ENST00000563920 PLEKHG5O94827 1062 aa23.15■■□□□ 1.3
CBFA2T3-206ENST00000563920 SLAIN2Q9P270 581 aa23.15■■□□□ 1.3
CBFA2T3-206ENST00000563920 RGPD1P0DJD0 1748 aa23.14■■□□□ 1.3
CBFA2T3-206ENST00000563920 SBNO1A3KN83 1393 aa23.14■■□□□ 1.29
CBFA2T3-206ENST00000563920 SLIT3O75094 1523 aa23.14■■□□□ 1.29
CBFA2T3-206ENST00000563920 HMOX1P09601 288 aa23.13■■□□□ 1.29
CBFA2T3-206ENST00000563920 LMOD2Q6P5Q4 547 aa23.13■■□□□ 1.29
CBFA2T3-206ENST00000563920 RSPH6AQ9H0K4 717 aa23.13■■□□□ 1.29
CBFA2T3-206ENST00000563920 MED1Q15648 1581 aaPredicted RBP23.13■■□□□ 1.29
CBFA2T3-206ENST00000563920 NEUROD2Q15784 382 aa23.12■■□□□ 1.29
CBFA2T3-206ENST00000563920 SPINK5Q9NQ38 1064 aaPredicted RBP23.11■■□□□ 1.29
CBFA2T3-206ENST00000563920 SUPT16HQ9Y5B9 1047 aaKnown RBP23.11■■□□□ 1.29
CBFA2T3-206ENST00000563920 FLT4P35916 1363 aa23.11■■□□□ 1.29
CBFA2T3-206ENST00000563920 USP19O94966 1318 aa23.11■■□□□ 1.29
CBFA2T3-206ENST00000563920 NPHP3Q7Z494 1330 aa23.1■■□□□ 1.29
CBFA2T3-206ENST00000563920 PDE3BQ13370 1112 aa23.1■■□□□ 1.29
CBFA2T3-206ENST00000563920 PRKAR2BP31323 418 aa23.09■■□□□ 1.29
CBFA2T3-206ENST00000563920 AMPHP49418 695 aa23.09■■□□□ 1.29
CBFA2T3-206ENST00000563920 AEBP1Q8IUX7 1158 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms