RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 GTPBP4Q9BZE4 634 aaKnown RBP15.22■□□□□ 0.03
SCAMP2-204ENST00000563829 BMP2KLQ5H9B9 411 aa15.21■□□□□ 0.03
SCAMP2-204ENST00000563829 LRSAM1Q6UWE0 723 aa15.21■□□□□ 0.03
SCAMP2-204ENST00000563829 STAC3Q96MF2 364 aa15.21■□□□□ 0.03
SCAMP2-204ENST00000563829 NOB1Q9ULX3 412 aaKnown RBP15.21■□□□□ 0.03
SCAMP2-204ENST00000563829 PLB1Q6P1J6 1458 aa15.21■□□□□ 0.03
SCAMP2-204ENST00000563829 DISP1Q96F81 1524 aa15.21■□□□□ 0.03
SCAMP2-204ENST00000563829 EXOSC9Q06265 439 aaKnown RBP15.21■□□□□ 0.03
SCAMP2-204ENST00000563829 ATF7IPQ6VMQ6 1270 aa15.21■□□□□ 0.03
SCAMP2-204ENST00000563829 SSH1Q8WYL5 1049 aa15.21■□□□□ 0.03
SCAMP2-204ENST00000563829 SHANK2Q9UPX8 1470 aa15.21■□□□□ 0.03
SCAMP2-204ENST00000563829 KIF20AO95235 890 aa15.2■□□□□ 0.02
SCAMP2-204ENST00000563829 MORC1Q86VD1 984 aa15.2■□□□□ 0.02
SCAMP2-204ENST00000563829 NSFL1CQ9UNZ2 370 aaKnown RBP15.2■□□□□ 0.02
SCAMP2-204ENST00000563829 CDC42BPAQ5VT25 1732 aa15.2■□□□□ 0.02
SCAMP2-204ENST00000563829 MYO5CQ9NQX4 1742 aa15.2■□□□□ 0.02
SCAMP2-204ENST00000563829 NUP160Q12769 1436 aa15.2■□□□□ 0.02
SCAMP2-204ENST00000563829 SLC24A1O60721 1099 aa15.2■□□□□ 0.02
SCAMP2-204ENST00000563829 C17orf53Q8N3J3 647 aaPredicted RBP15.2■□□□□ 0.02
SCAMP2-204ENST00000563829 BCL11BQ9C0K0 894 aaPredicted RBP15.2■□□□□ 0.02
SCAMP2-204ENST00000563829 KIAA0556O60303 1618 aa15.19■□□□□ 0.02
SCAMP2-204ENST00000563829 ZBTB40Q9NUA8 1239 aa15.19■□□□□ 0.02
SCAMP2-204ENST00000563829 POLR3AO14802 1390 aaPredicted RBP15.19■□□□□ 0.02
SCAMP2-204ENST00000563829 LETM1O95202 739 aaPredicted RBP15.18■□□□□ 0.02
SCAMP2-204ENST00000563829 PHF23Q9BUL5 403 aaPredicted RBP15.18■□□□□ 0.02
SCAMP2-204ENST00000563829 ZGPATQ8N5A5 531 aaKnown RBP15.18■□□□□ 0.02
SCAMP2-204ENST00000563829 CHMP4BQ9H444 224 aaKnown RBP15.18■□□□□ 0.02
SCAMP2-204ENST00000563829 GRIN2AQ12879 1464 aa15.17■□□□□ 0.02
SCAMP2-204ENST00000563829 KIF3AQ9Y496 699 aa15.17■□□□□ 0.02
SCAMP2-204ENST00000563829 U2AF1L5P0DN76 240 aaPredicted RBP15.16■□□□□ 0.02
SCAMP2-204ENST00000563829 U2AF1Q01081 240 aaKnown RBP eCLIP15.16■□□□□ 0.02
SCAMP2-204ENST00000563829 PRIMPOLQ96LW4 560 aa15.16■□□□□ 0.02
SCAMP2-204ENST00000563829 C1orf115Q9H7X2 142 aa15.16■□□□□ 0.02
SCAMP2-204ENST00000563829 HMGN5P82970 282 aaKnown RBP15.16■□□□□ 0.02
SCAMP2-204ENST00000563829 NAP1L2Q9ULW6 460 aaPredicted RBP15.16■□□□□ 0.02
SCAMP2-204ENST00000563829 VGLL3A8MV65 326 aa15.15■□□□□ 0.02
SCAMP2-204ENST00000563829 MTHFSP49914 203 aa15.15■□□□□ 0.02
SCAMP2-204ENST00000563829 NOLC1Q14978 699 aaKnown RBP eCLIP15.15■□□□□ 0.02
SCAMP2-204ENST00000563829 CYP2E1P05181 493 aaPredicted RBP15.15■□□□□ 0.02
SCAMP2-204ENST00000563829 PDCL2Q8N4E4 241 aa15.14■□□□□ 0.01
SCAMP2-204ENST00000563829 TTC12Q9H892 705 aaPredicted RBP15.14■□□□□ 0.01
SCAMP2-204ENST00000563829 CGNQ9P2M7 1197 aaKnown RBP15.14■□□□□ 0.01
SCAMP2-204ENST00000563829 SYNJ2O15056 1496 aa15.14■□□□□ 0.01
SCAMP2-204ENST00000563829 SCAF11Q99590 1463 aaKnown RBP15.14■□□□□ 0.01
SCAMP2-204ENST00000563829 RABEP1Q15276 862 aa15.14■□□□□ 0.01
SCAMP2-204ENST00000563829 BCL2L12Q9HB09 334 aa15.14■□□□□ 0.01
SCAMP2-204ENST00000563829 U2AF2P26368 475 aaKnown RBP eCLIP15.13■□□□□ 0.01
SCAMP2-204ENST00000563829 MYOM1P52179 1685 aa15.13■□□□□ 0.01
SCAMP2-204ENST00000563829 ZBTB22O15209 634 aa15.13■□□□□ 0.01
SCAMP2-204ENST00000563829 CCDC27Q2M243 656 aa15.13■□□□□ 0.01
SCAMP2-204ENST00000563829 ZDHHC9Q9Y397 364 aa15.13■□□□□ 0.01
SCAMP2-204ENST00000563829 CDC45O75419 566 aa15.12■□□□□ 0.01
SCAMP2-204ENST00000563829 FOXD4L6Q3SYB3 417 aaPredicted RBP15.12■□□□□ 0.01
SCAMP2-204ENST00000563829 TPRNQ4KMQ1 711 aa15.12■□□□□ 0.01
SCAMP2-204ENST00000563829 FOXD4L3Q6VB84 417 aaPredicted RBP15.12■□□□□ 0.01
SCAMP2-204ENST00000563829 TSPY26PQ9H489 355 aa15.12■□□□□ 0.01
SCAMP2-204ENST00000563829 TMEM51Q9NW97 253 aa15.12■□□□□ 0.01
SCAMP2-204ENST00000563829 ZNF771Q7L3S4 317 aaPredicted RBP15.12■□□□□ 0.01
SCAMP2-204ENST00000563829 PIBF1Q8WXW3 757 aa15.12■□□□□ 0.01
SCAMP2-204ENST00000563829 RNF17Q9BXT8 1623 aaKnown RBP15.11■□□□□ 0.01
SCAMP2-204ENST00000563829 ADAMTS12P58397 1594 aa15.11■□□□□ 0.01
SCAMP2-204ENST00000563829 PBRM1Q86U86 1689 aa15.11■□□□□ 0.01
SCAMP2-204ENST00000563829 SHROOM2Q13796 1616 aa15.11■□□□□ 0.01
SCAMP2-204ENST00000563829 CFAP53Q96M91 514 aa15.11■□□□□ 0.01
SCAMP2-204ENST00000563829 IQSEC2Q5JU85 1478 aa15.11■□□□□ 0.01
SCAMP2-204ENST00000563829 ARHGAP31Q2M1Z3 1444 aa15.11■□□□□ 0.01
SCAMP2-204ENST00000563829 USP25Q9UHP3 1055 aa15.1■□□□□ 0.01
SCAMP2-204ENST00000563829 GTF2F1P35269 517 aaKnown RBP eCLIP15.1■□□□□ 0.01
SCAMP2-204ENST00000563829 CWC22Q9HCG8 908 aaKnown RBP15.1■□□□□ 0.01
SCAMP2-204ENST00000563829 PLCB2Q00722 1185 aa15.1■□□□□ 0.01
SCAMP2-204ENST00000563829 DNAJC5BQ9UF47 199 aa15.1■□□□□ 0.01
SCAMP2-204ENST00000563829 KANK1Q14678 1352 aa15.09■□□□□ 0.01
SCAMP2-204ENST00000563829 IPO8O15397 1037 aaKnown RBP15.09■□□□□ 0.01
SCAMP2-204ENST00000563829 IQGAP1P46940 1657 aa15.09■□□□□ 0.01
SCAMP2-204ENST00000563829 CT47B1P0C2W7 299 aaPredicted RBP15.08■□□□□ 0.01
SCAMP2-204ENST00000563829 TARBP1Q13395 1621 aaKnown RBP15.08■□□□□ 0
SCAMP2-204ENST00000563829 MBD3O95983 291 aa15.08■□□□□ 0
SCAMP2-204ENST00000563829 MAPK8IP2Q13387 824 aaPredicted RBP15.08■□□□□ 0
SCAMP2-204ENST00000563829 U2SURPO15042 1029 aaKnown RBP15.08■□□□□ 0
SCAMP2-204ENST00000563829 ST18O60284 1047 aa15.08■□□□□ 0
SCAMP2-204ENST00000563829 KDM5AP29375 1690 aaKnown RBP15.07■□□□□ 0
SCAMP2-204ENST00000563829 NSD3Q9BZ95 1437 aa15.07■□□□□ 0
SCAMP2-204ENST00000563829 CFAP70Q5T0N1 1121 aa15.07■□□□□ 0
SCAMP2-204ENST00000563829 GCC1Q96CN9 775 aa15.07■□□□□ 0
SCAMP2-204ENST00000563829 GSPT1P15170 499 aaKnown RBP15.07■□□□□ 0
SCAMP2-204ENST00000563829 SLC12A5Q9H2X9 1139 aa15.07■□□□□ 0
SCAMP2-204ENST00000563829 CDK11BP21127 795 aaKnown RBP15.06■□□□□ 0
SCAMP2-204ENST00000563829 PLCD3Q8N3E9 789 aa15.06■□□□□ 0
SCAMP2-204ENST00000563829 MAGI1Q96QZ7 1491 aaPredicted RBP15.06■□□□□ 0
SCAMP2-204ENST00000563829 SHPRHQ149N8 1683 aa15.06■□□□□ 0
SCAMP2-204ENST00000563829 GDPD2Q9HCC8 539 aa15.06■□□□□ 0
SCAMP2-204ENST00000563829 CFAP74Q9C0B2 1584 aa15.06■□□□□ 0
SCAMP2-204ENST00000563829 USP26Q9BXU7 913 aa15.06■□□□□ 0
SCAMP2-204ENST00000563829 PPIP5K1Q6PFW1 1433 aa15.05■□□□□ 0
SCAMP2-204ENST00000563829 RIOK3O14730 519 aaKnown RBP15.05■□□□□ -0
SCAMP2-204ENST00000563829 ADCY5O95622 1261 aa15.05■□□□□ -0
SCAMP2-204ENST00000563829 FKBP5Q13451 457 aaPredicted RBP15.05■□□□□ -0
SCAMP2-204ENST00000563829 CHAF1AQ13111 956 aaPredicted RBP15.05■□□□□ -0
SCAMP2-204ENST00000563829 PDIA4P13667 645 aaKnown RBP15.04■□□□□ -0
SCAMP2-204ENST00000563829 MADDQ8WXG6 1647 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms