RNA–Protein interactions for RNA: ENST00000563741.5

SPSB3-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 5

Gene SPSB3, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-204ENST00000563741 NPC1L1Q9UHC9 1359 aa26.38■■□□□ 1.81
SPSB3-204ENST00000563741 PNPLA6Q8IY17 1366 aa26.37■■□□□ 1.81
SPSB3-204ENST00000563741 PARD3Q8TEW0 1356 aa26.37■■□□□ 1.81
SPSB3-204ENST00000563741 CPSF1Q10570 1443 aaKnown RBP26.36■■□□□ 1.81
SPSB3-204ENST00000563741 CC2D1BQ5T0F9 858 aaKnown RBP26.36■■□□□ 1.81
SPSB3-204ENST00000563741 XPCQ01831 940 aaPredicted RBP26.35■■□□□ 1.81
SPSB3-204ENST00000563741 HDGFL2Q7Z4V5 671 aaPredicted RBP26.35■■□□□ 1.81
SPSB3-204ENST00000563741 LRP6O75581 1613 aa26.34■■□□□ 1.81
SPSB3-204ENST00000563741 CCER2I3L3R5 266 aa26.34■■□□□ 1.81
SPSB3-204ENST00000563741 ITSN1Q15811 1721 aa26.33■■□□□ 1.81
SPSB3-204ENST00000563741 RALBP1Q15311 655 aa26.33■■□□□ 1.81
SPSB3-204ENST00000563741 PLEKHG3A1L390 1219 aa26.32■■□□□ 1.8
SPSB3-204ENST00000563741 NUTM2BA6NNL0 878 aaPredicted RBP26.32■■□□□ 1.8
SPSB3-204ENST00000563741 NUTM2EB1AL46 878 aaPredicted RBP26.32■■□□□ 1.8
SPSB3-204ENST00000563741 KRT28Q7Z3Y7 464 aa26.32■■□□□ 1.8
SPSB3-204ENST00000563741 NUTM2AQ8IVF1 878 aaPredicted RBP26.32■■□□□ 1.8
SPSB3-204ENST00000563741 MEX3CQ5U5Q3 659 aaKnown RBP26.31■■□□□ 1.8
SPSB3-204ENST00000563741 ILDR2Q71H61 639 aa26.31■■□□□ 1.8
SPSB3-204ENST00000563741 PMFBP1Q8TBY8 1022 aa26.31■■□□□ 1.8
SPSB3-204ENST00000563741 CGNL1Q0VF96 1302 aa26.3■■□□□ 1.8
SPSB3-204ENST00000563741 PSME1Q06323 249 aa26.3■■□□□ 1.8
SPSB3-204ENST00000563741 RGS17Q9UGC6 210 aaPredicted RBP26.28■■□□□ 1.8
SPSB3-204ENST00000563741 COL22A1Q8NFW1 1626 aaPredicted RBP26.28■■□□□ 1.8
SPSB3-204ENST00000563741 AKAP12Q02952 1782 aa26.28■■□□□ 1.8
SPSB3-204ENST00000563741 MON2Q7Z3U7 1717 aa26.28■■□□□ 1.8
SPSB3-204ENST00000563741 EDC4Q6P2E9 1401 aaKnown RBP26.27■■□□□ 1.8
SPSB3-204ENST00000563741 ACEP12821 1306 aa26.27■■□□□ 1.8
SPSB3-204ENST00000563741 POLR3AO14802 1390 aaPredicted RBP26.26■■□□□ 1.79
SPSB3-204ENST00000563741 SPATA31A3Q5VYP0 1347 aa26.26■■□□□ 1.79
SPSB3-204ENST00000563741 MYBBP1AQ9BQG0 1328 aaKnown RBP26.26■■□□□ 1.79
SPSB3-204ENST00000563741 NSD2O96028 1365 aa26.26■■□□□ 1.79
SPSB3-204ENST00000563741 SBNO1A3KN83 1393 aa26.24■■□□□ 1.79
SPSB3-204ENST00000563741 NGDNQ8NEJ9 315 aaKnown RBP26.24■■□□□ 1.79
SPSB3-204ENST00000563741 ZNF692Q9BU19 519 aaPredicted RBP26.24■■□□□ 1.79
SPSB3-204ENST00000563741 USP6P35125 1406 aa26.23■■□□□ 1.79
SPSB3-204ENST00000563741 NRKQ7Z2Y5 1582 aa26.23■■□□□ 1.79
SPSB3-204ENST00000563741 TNS3Q68CZ2 1445 aa26.22■■□□□ 1.79
SPSB3-204ENST00000563741 CCDC184Q52MB2 194 aa26.22■■□□□ 1.79
SPSB3-204ENST00000563741 FYB1O15117 783 aa26.19■■□□□ 1.78
SPSB3-204ENST00000563741 TRPM3Q9HCF6 1732 aaPredicted RBP26.19■■□□□ 1.78
SPSB3-204ENST00000563741 SSH2Q76I76 1423 aa26.19■■□□□ 1.78
SPSB3-204ENST00000563741 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.19■■□□□ 1.78
SPSB3-204ENST00000563741 ADAMTS2O95450 1211 aa26.18■■□□□ 1.78
SPSB3-204ENST00000563741 NLRP13Q86W25 1043 aa26.18■■□□□ 1.78
SPSB3-204ENST00000563741 KIF20BQ96Q89 1820 aa26.18■■□□□ 1.78
SPSB3-204ENST00000563741 ARHGEF10O15013 1369 aa26.17■■□□□ 1.78
SPSB3-204ENST00000563741 GGNBP2Q9H3C7 697 aa26.17■■□□□ 1.78
SPSB3-204ENST00000563741 MRS2Q9HD23 443 aa26.17■■□□□ 1.78
SPSB3-204ENST00000563741 BRD4O60885 1362 aaPredicted RBP26.16■■□□□ 1.78
SPSB3-204ENST00000563741 ZNF772Q68DY9 489 aaPredicted RBP26.16■■□□□ 1.78
SPSB3-204ENST00000563741 LMOD2Q6P5Q4 547 aa26.16■■□□□ 1.78
SPSB3-204ENST00000563741 POTEAQ6S8J7 498 aa26.16■■□□□ 1.78
SPSB3-204ENST00000563741 MORC1Q86VD1 984 aa26.16■■□□□ 1.78
SPSB3-204ENST00000563741 C8orf37Q96NL8 207 aa26.16■■□□□ 1.78
SPSB3-204ENST00000563741 ANKRD26Q9UPS8 1709 aa26.15■■□□□ 1.78
SPSB3-204ENST00000563741 PPP2R1AP30153 589 aa26.15■■□□□ 1.78
SPSB3-204ENST00000563741 TTC21BQ7Z4L5 1316 aa26.15■■□□□ 1.78
SPSB3-204ENST00000563741 MARF1Q9Y4F3 1742 aaKnown RBP26.14■■□□□ 1.77
SPSB3-204ENST00000563741 ALS2Q96Q42 1657 aa26.13■■□□□ 1.77
SPSB3-204ENST00000563741 AFF2P51816 1311 aa26.13■■□□□ 1.77
SPSB3-204ENST00000563741 NME9Q86XW9 330 aa26.13■■□□□ 1.77
SPSB3-204ENST00000563741 NGLY1Q96IV0 654 aa26.12■■□□□ 1.77
SPSB3-204ENST00000563741 PAK3O75914 559 aaPredicted RBP26.11■■□□□ 1.77
SPSB3-204ENST00000563741 TTC21AQ8NDW8 1320 aa26.09■■□□□ 1.77
SPSB3-204ENST00000563741 TNNT2P45379 298 aaPredicted RBP26.08■■□□□ 1.77
SPSB3-204ENST00000563741 HAP1P54257 671 aaPredicted RBP26.08■■□□□ 1.77
SPSB3-204ENST00000563741 CABLES1Q8TDN4 633 aa26.08■■□□□ 1.76
SPSB3-204ENST00000563741 ABCA3Q99758 1704 aa26.07■■□□□ 1.76
SPSB3-204ENST00000563741 ZRANB1Q9UGI0 708 aa26.07■■□□□ 1.76
SPSB3-204ENST00000563741 OVOS2A0A0J9YW53 1432 aa26.06■■□□□ 1.76
SPSB3-204ENST00000563741 OVOS2Q6IE36 1432 aa26.06■■□□□ 1.76
SPSB3-204ENST00000563741 PLEKHG5O94827 1062 aa26.06■■□□□ 1.76
SPSB3-204ENST00000563741 PIK3C2AO00443 1686 aa26.04■■□□□ 1.76
SPSB3-204ENST00000563741 SOCS7O14512 581 aa26.04■■□□□ 1.76
SPSB3-204ENST00000563741 FNBP4Q8N3X1 1017 aaPredicted RBP26.04■■□□□ 1.76
SPSB3-204ENST00000563741 COG3Q96JB2 828 aa26.03■■□□□ 1.76
SPSB3-204ENST00000563741 YTHDC1Q96MU7 727 aaKnown RBP26.02■■□□□ 1.76
SPSB3-204ENST00000563741 USP21Q9UK80 565 aa26.02■■□□□ 1.76
SPSB3-204ENST00000563741 USP31Q70CQ4 1352 aa26.01■■□□□ 1.75
SPSB3-204ENST00000563741 PNISRQ8TF01 805 aaKnown RBP26.01■■□□□ 1.75
SPSB3-204ENST00000563741 QTRT2Q9H974 415 aaKnown RBP26■■□□□ 1.75
SPSB3-204ENST00000563741 CRYBG1Q9Y4K1 1723 aa25.99■■□□□ 1.75
SPSB3-204ENST00000563741 RXRBP28702 533 aa25.99■■□□□ 1.75
SPSB3-204ENST00000563741 FAM9BQ8IZU0 186 aa25.98■■□□□ 1.75
SPSB3-204ENST00000563741 ABTB2Q8N961 1025 aa25.98■■□□□ 1.75
SPSB3-204ENST00000563741 MTHFSP49914 203 aa25.97■■□□□ 1.75
SPSB3-204ENST00000563741 USP54Q70EL1 1684 aa25.97■■□□□ 1.75
SPSB3-204ENST00000563741 AATKQ6ZMQ8 1374 aa25.97■■□□□ 1.75
SPSB3-204ENST00000563741 NUTM2GQ5VZR2 741 aa25.96■■□□□ 1.75
SPSB3-204ENST00000563741 BCL9LQ86UU0 1499 aa25.95■■□□□ 1.75
SPSB3-204ENST00000563741 TRPC5Q9UL62 973 aaPredicted RBP25.95■■□□□ 1.74
SPSB3-204ENST00000563741 SLIT2O94813 1529 aa25.95■■□□□ 1.74
SPSB3-204ENST00000563741 SMG6Q86US8 1419 aaKnown RBP25.94■■□□□ 1.74
SPSB3-204ENST00000563741 FBLN1P23142 703 aa25.94■■□□□ 1.74
SPSB3-204ENST00000563741 RBM6P78332 1123 aaKnown RBP25.94■■□□□ 1.74
SPSB3-204ENST00000563741 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.93■■□□□ 1.74
SPSB3-204ENST00000563741 PHRF1Q9P1Y6 1649 aaKnown RBP25.93■■□□□ 1.74
SPSB3-204ENST00000563741 NLRP6P59044 892 aa25.93■■□□□ 1.74
SPSB3-204ENST00000563741 PLCH1Q4KWH8 1693 aa25.93■■□□□ 1.74
SPSB3-204ENST00000563741 ATRNO75882 1429 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms