RNA–Protein interactions for RNA: ENST00000563591.5

SH2B1-208, Transcript of SH2B adaptor protein 1, human

TSL 2

Gene SH2B1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH2B1-208	ENST00000563591	ITSN1	Q15811	1721 aa		31.86	■■■□□ 2.69
SH2B1-208	ENST00000563591	TMC1	Q8TDI8	760 aa		31.85	■■■□□ 2.69
SH2B1-208	ENST00000563591	NUTM2G	Q5VZR2	741 aa		31.84	■■■□□ 2.69
SH2B1-208	ENST00000563591	ZNF692	Q9BU19	519 aa	Predicted RBP	31.84	■■■□□ 2.69
SH2B1-208	ENST00000563591	SLC12A5	Q9H2X9	1139 aa		31.83	■■■□□ 2.69
SH2B1-208	ENST00000563591	TMF1	P82094	1093 aa		31.82	■■■□□ 2.68
SH2B1-208	ENST00000563591	ABTB2	Q8N961	1025 aa		31.82	■■■□□ 2.68
SH2B1-208	ENST00000563591	TRPM3	Q9HCF6	1732 aa	Predicted RBP	31.81	■■■□□ 2.68
SH2B1-208	ENST00000563591	FNBP4	Q8N3X1	1017 aa	Predicted RBP	31.8	■■■□□ 2.68
SH2B1-208	ENST00000563591	USP6	P35125	1406 aa		31.77	■■■□□ 2.68
SH2B1-208	ENST00000563591	EIF4G2	P78344	907 aa	Known RBP eCLIP	31.77	■■■□□ 2.68
SH2B1-208	ENST00000563591	QTRT2	Q9H974	415 aa	Known RBP	31.76	■■■□□ 2.67
SH2B1-208	ENST00000563591	USP21	Q9UK80	565 aa		31.76	■■■□□ 2.67
SH2B1-208	ENST00000563591	BRD4	O60885	1362 aa	Predicted RBP	31.76	■■■□□ 2.67
SH2B1-208	ENST00000563591	HSPA5	P11021	654 aa	Known RBP	31.75	■■■□□ 2.67
SH2B1-208	ENST00000563591	CPSF1	Q10570	1443 aa	Known RBP	31.75	■■■□□ 2.67
SH2B1-208	ENST00000563591	FAM83G	A6ND36	823 aa		31.74	■■■□□ 2.67
SH2B1-208	ENST00000563591	SSH2	Q76I76	1423 aa		31.74	■■■□□ 2.67
SH2B1-208	ENST00000563591	ALS2	Q96Q42	1657 aa		31.73	■■■□□ 2.67
SH2B1-208	ENST00000563591	TTC21B	Q7Z4L5	1316 aa		31.73	■■■□□ 2.67
SH2B1-208	ENST00000563591	KTN1	Q86UP2	1357 aa	Known RBP	31.72	■■■□□ 2.67
SH2B1-208	ENST00000563591	NLRP13	Q86W25	1043 aa		31.72	■■■□□ 2.67
SH2B1-208	ENST00000563591	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	31.71	■■■□□ 2.67
SH2B1-208	ENST00000563591	NLRP6	P59044	892 aa		31.7	■■■□□ 2.67
SH2B1-208	ENST00000563591	CDCA8	Q53HL2	280 aa		31.7	■■■□□ 2.67
SH2B1-208	ENST00000563591	TERF2IP	Q9NYB0	399 aa		31.7	■■■□□ 2.67
SH2B1-208	ENST00000563591	RXRB	P28702	533 aa		31.68	■■■□□ 2.66
SH2B1-208	ENST00000563591	CD163L1	Q9NR16	1453 aa		31.67	■■■□□ 2.66
SH2B1-208	ENST00000563591	ZC3H6	P61129	1189 aa	Known RBP	31.66	■■■□□ 2.66
SH2B1-208	ENST00000563591	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	31.66	■■■□□ 2.66
SH2B1-208	ENST00000563591	BCL9L	Q86UU0	1499 aa		31.65	■■■□□ 2.66
SH2B1-208	ENST00000563591	UNC5CL	Q8IV45	518 aa		31.65	■■■□□ 2.66
SH2B1-208	ENST00000563591	TRPC5	Q9UL62	973 aa	Predicted RBP	31.65	■■■□□ 2.66
SH2B1-208	ENST00000563591	GC	P02774	474 aa		31.64	■■■□□ 2.66
SH2B1-208	ENST00000563591	USP19	O94966	1318 aa		31.64	■■■□□ 2.66
SH2B1-208	ENST00000563591	TTC21A	Q8NDW8	1320 aa		31.64	■■■□□ 2.66
SH2B1-208	ENST00000563591		A0A1W2PP64	1363 aa		31.62	■■■□□ 2.65
SH2B1-208	ENST00000563591	NINL	Q9Y2I6	1382 aa		31.62	■■■□□ 2.65
SH2B1-208	ENST00000563591	RBM6	P78332	1123 aa	Known RBP	31.61	■■■□□ 2.65
SH2B1-208	ENST00000563591	PRDM11	Q9NQV5	511 aa		31.61	■■■□□ 2.65
SH2B1-208	ENST00000563591	ZRANB1	Q9UGI0	708 aa		31.61	■■■□□ 2.65
SH2B1-208	ENST00000563591	SLIT2	O94813	1529 aa		31.6	■■■□□ 2.65
SH2B1-208	ENST00000563591	KIAA0232	Q92628	1395 aa		31.6	■■■□□ 2.65
SH2B1-208	ENST00000563591	BTG4	Q9NY30	223 aa		31.6	■■■□□ 2.65
SH2B1-208	ENST00000563591	CHRNA2	Q15822	529 aa		31.59	■■■□□ 2.65
SH2B1-208	ENST00000563591	NME9	Q86XW9	330 aa		31.58	■■■□□ 2.65
SH2B1-208	ENST00000563591	SOCS7	O14512	581 aa		31.57	■■■□□ 2.64
SH2B1-208	ENST00000563591	POLR3GL	Q9BT43	218 aa		31.57	■■■□□ 2.64
SH2B1-208	ENST00000563591	ATRN	O75882	1429 aa		31.56	■■■□□ 2.64
SH2B1-208	ENST00000563591	ABCA3	Q99758	1704 aa		31.55	■■■□□ 2.64
SH2B1-208	ENST00000563591	AKAP12	Q02952	1782 aa		31.54	■■■□□ 2.64
SH2B1-208	ENST00000563591	C11orf95	C9JLR9	678 aa	Predicted RBP	31.54	■■■□□ 2.64
SH2B1-208	ENST00000563591	GJD4	Q96KN9	370 aa	Predicted RBP	31.54	■■■□□ 2.64
SH2B1-208	ENST00000563591	EDC4	Q6P2E9	1401 aa	Known RBP	31.54	■■■□□ 2.64
SH2B1-208	ENST00000563591	MARF1	Q9Y4F3	1742 aa	Known RBP	31.54	■■■□□ 2.64
SH2B1-208	ENST00000563591	ANKRD36B	Q8N2N9	1353 aa		31.53	■■■□□ 2.64
SH2B1-208	ENST00000563591	VPS72	Q15906	364 aa		31.52	■■■□□ 2.64
SH2B1-208	ENST00000563591	SOX12	O15370	315 aa		31.51	■■■□□ 2.63
SH2B1-208	ENST00000563591	CRYBG1	Q9Y4K1	1723 aa		31.51	■■■□□ 2.63
SH2B1-208	ENST00000563591	ZBTB7C	A1YPR0	619 aa		31.5	■■■□□ 2.63
SH2B1-208	ENST00000563591	KCNH5	Q8NCM2	988 aa		31.5	■■■□□ 2.63
SH2B1-208	ENST00000563591	CPD	O75976	1380 aa		31.5	■■■□□ 2.63
SH2B1-208	ENST00000563591	USP31	Q70CQ4	1352 aa		31.5	■■■□□ 2.63
SH2B1-208	ENST00000563591	CCDC9	Q9Y3X0	531 aa	Known RBP	31.49	■■■□□ 2.63
SH2B1-208	ENST00000563591	PIK3C2A	O00443	1686 aa		31.48	■■■□□ 2.63
SH2B1-208	ENST00000563591	CARD14	Q9BXL6	1004 aa		31.48	■■■□□ 2.63
SH2B1-208	ENST00000563591	MON2	Q7Z3U7	1717 aa		31.46	■■■□□ 2.63
SH2B1-208	ENST00000563591	PHRF1	Q9P1Y6	1649 aa	Known RBP	31.46	■■■□□ 2.63
SH2B1-208	ENST00000563591	NRK	Q7Z2Y5	1582 aa		31.45	■■■□□ 2.63
SH2B1-208	ENST00000563591	ARHGEF25	Q86VW2	580 aa		31.45	■■■□□ 2.63
SH2B1-208	ENST00000563591	SLIT3	O75094	1523 aa		31.44	■■■□□ 2.62
SH2B1-208	ENST00000563591	EVA1C	P58658	441 aa		31.44	■■■□□ 2.62
SH2B1-208	ENST00000563591	STRN4	Q9NRL3	753 aa		31.44	■■■□□ 2.62
SH2B1-208	ENST00000563591	FYB1	O15117	783 aa		31.43	■■■□□ 2.62
SH2B1-208	ENST00000563591	COL14A1	Q05707	1796 aa	Known RBP	31.43	■■■□□ 2.62
SH2B1-208	ENST00000563591	CDK12	Q9NYV4	1490 aa	Predicted RBP	31.41	■■■□□ 2.62
SH2B1-208	ENST00000563591	COG3	Q96JB2	828 aa		31.4	■■■□□ 2.62
SH2B1-208	ENST00000563591	GGNBP2	Q9H3C7	697 aa		31.39	■■■□□ 2.62
SH2B1-208	ENST00000563591	AXIN2	Q9Y2T1	843 aa		31.39	■■■□□ 2.62
SH2B1-208	ENST00000563591	AATK	Q6ZMQ8	1374 aa		31.39	■■■□□ 2.62
SH2B1-208	ENST00000563591	RGS12	O14924	1447 aa		31.39	■■■□□ 2.62
SH2B1-208	ENST00000563591	PLCH1	Q4KWH8	1693 aa		31.38	■■■□□ 2.61
SH2B1-208	ENST00000563591	SPATA31A5	Q5VU36	1347 aa		31.38	■■■□□ 2.61
SH2B1-208	ENST00000563591	SPATA31A7	Q8IWB4	1347 aa		31.38	■■■□□ 2.61
SH2B1-208	ENST00000563591	PANK3	Q9H999	370 aa		31.37	■■■□□ 2.61
SH2B1-208	ENST00000563591	CAMTA1	Q9Y6Y1	1673 aa		31.37	■■■□□ 2.61
SH2B1-208	ENST00000563591	NWD2	Q9ULI1	1742 aa		31.37	■■■□□ 2.61
SH2B1-208	ENST00000563591	ONECUT3	O60422	494 aa	Predicted RBP	31.36	■■■□□ 2.61
SH2B1-208	ENST00000563591	LARP1	Q6PKG0	1096 aa	Known RBP	31.36	■■■□□ 2.61
SH2B1-208	ENST00000563591	KIF7	Q2M1P5	1343 aa		31.35	■■■□□ 2.61
SH2B1-208	ENST00000563591	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	31.35	■■■□□ 2.61
SH2B1-208	ENST00000563591	OVOS2	A0A0J9YW53	1432 aa		31.34	■■■□□ 2.61
SH2B1-208	ENST00000563591	OVOS2	Q6IE36	1432 aa		31.34	■■■□□ 2.61
SH2B1-208	ENST00000563591	FBLN1	P23142	703 aa		31.34	■■■□□ 2.61
SH2B1-208	ENST00000563591	FAM98C	Q17RN3	349 aa	Known RBP	31.33	■■■□□ 2.61
SH2B1-208	ENST00000563591	SEPT12	Q8IYM1	358 aa		31.33	■■■□□ 2.61
SH2B1-208	ENST00000563591	NSD3	Q9BZ95	1437 aa		31.32	■■■□□ 2.61
SH2B1-208	ENST00000563591	GLI3	P10071	1580 aa		31.32	■■■□□ 2.6
SH2B1-208	ENST00000563591	SPATA31A1	Q5TZJ5	1347 aa		31.31	■■■□□ 2.6
SH2B1-208	ENST00000563591	NFAT5	O94916	1531 aa		31.31	■■■□□ 2.6

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms