RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 NUDT16Q96DE0 195 aaKnown RBP30.5■■■□□ 2.47
CHD9-208ENST00000563410 CDK19Q9BWU1 502 aa30.47■■■□□ 2.47
CHD9-208ENST00000563410 CCDC9Q9Y3X0 531 aaKnown RBP30.47■■■□□ 2.47
CHD9-208ENST00000563410 NBPF1Q3BBV0 1214 aa30.46■■■□□ 2.47
CHD9-208ENST00000563410 PAK3O75914 559 aaPredicted RBP30.45■■■□□ 2.47
CHD9-208ENST00000563410 BTG4Q9NY30 223 aa30.45■■■□□ 2.47
CHD9-208ENST00000563410 BLMP54132 1417 aaPredicted RBP30.44■■■□□ 2.46
CHD9-208ENST00000563410 SRCAPQ6ZRS2 3230 aa30.44■■■□□ 2.46
CHD9-208ENST00000563410 PHRF1Q9P1Y6 1649 aaKnown RBP30.43■■■□□ 2.46
CHD9-208ENST00000563410 POLR3AO14802 1390 aaPredicted RBP30.41■■■□□ 2.46
CHD9-208ENST00000563410 KRT27Q7Z3Y8 459 aa30.38■■■□□ 2.45
CHD9-208ENST00000563410 ZRANB1Q9UGI0 708 aa30.38■■■□□ 2.45
CHD9-208ENST00000563410 CCDC61Q9Y6R9 512 aa30.37■■■□□ 2.45
CHD9-208ENST00000563410 ACEP12821 1306 aa30.37■■■□□ 2.45
CHD9-208ENST00000563410 PLEKHG3A1L390 1219 aa30.36■■■□□ 2.45
CHD9-208ENST00000563410 FAM98CQ17RN3 349 aaKnown RBP30.36■■■□□ 2.45
CHD9-208ENST00000563410 NBPF8Q3BBV2 869 aa30.35■■■□□ 2.45
CHD9-208ENST00000563410 PRDM11Q9NQV5 511 aa30.34■■■□□ 2.45
CHD9-208ENST00000563410 QRICH2Q9H0J4 1663 aa30.33■■■□□ 2.45
CHD9-208ENST00000563410 SPATA31A5Q5VU36 1347 aa30.33■■■□□ 2.45
CHD9-208ENST00000563410 SPATA31A7Q8IWB4 1347 aa30.33■■■□□ 2.45
CHD9-208ENST00000563410 DEFB132Q7Z7B7 95 aa30.33■■■□□ 2.45
CHD9-208ENST00000563410 KIAA0232Q92628 1395 aa30.32■■■□□ 2.44
CHD9-208ENST00000563410 THSD7AQ9UPZ6 1657 aa30.32■■■□□ 2.44
CHD9-208ENST00000563410 CENPJQ9HC77 1338 aaPredicted RBP30.31■■■□□ 2.44
CHD9-208ENST00000563410 NUTM2GQ5VZR2 741 aa30.31■■■□□ 2.44
CHD9-208ENST00000563410 A0A0G2JS52 829 aa30.3■■■□□ 2.44
CHD9-208ENST00000563410 MYT1Q01538 1121 aa30.3■■■□□ 2.44
CHD9-208ENST00000563410 L3MBTL2Q969R5 705 aa30.29■■■□□ 2.44
CHD9-208ENST00000563410 NRKQ7Z2Y5 1582 aa30.28■■■□□ 2.44
CHD9-208ENST00000563410 CHRNA2Q15822 529 aa30.28■■■□□ 2.44
CHD9-208ENST00000563410 TRPM1Q7Z4N2 1603 aa30.27■■■□□ 2.44
CHD9-208ENST00000563410 ZC3H6P61129 1189 aaKnown RBP30.27■■■□□ 2.44
CHD9-208ENST00000563410 SF3B2Q13435 895 aaKnown RBP30.27■■■□□ 2.44
CHD9-208ENST00000563410 PPIP5K1Q6PFW1 1433 aa30.27■■■□□ 2.44
CHD9-208ENST00000563410 SRPK2P78362 688 aaKnown RBP30.26■■■□□ 2.43
CHD9-208ENST00000563410 CABP2Q9NPB3 220 aa30.25■■■□□ 2.43
CHD9-208ENST00000563410 SIN3AQ96ST3 1273 aa30.24■■■□□ 2.43
CHD9-208ENST00000563410 SPATA31A1Q5TZJ5 1347 aa30.23■■■□□ 2.43
CHD9-208ENST00000563410 ABTB2Q8N961 1025 aa30.23■■■□□ 2.43
CHD9-208ENST00000563410 RGPD1P0DJD0 1748 aa30.22■■■□□ 2.43
CHD9-208ENST00000563410 USP19O94966 1318 aa30.22■■■□□ 2.43
CHD9-208ENST00000563410 LMO7Q8WWI1 1683 aa30.21■■■□□ 2.43
CHD9-208ENST00000563410 FAM182BQ5T319 152 aa30.2■■■□□ 2.43
CHD9-208ENST00000563410 STRN4Q9NRL3 753 aa30.2■■■□□ 2.43
CHD9-208ENST00000563410 CAMTA1Q9Y6Y1 1673 aa30.19■■■□□ 2.42
CHD9-208ENST00000563410 CPDO75976 1380 aa30.17■■■□□ 2.42
CHD9-208ENST00000563410 TNS1Q9HBL0 1735 aaKnown RBP30.16■■■□□ 2.42
CHD9-208ENST00000563410 SSH2Q76I76 1423 aa30.16■■■□□ 2.42
CHD9-208ENST00000563410 BRD4O60885 1362 aaPredicted RBP30.15■■■□□ 2.42
CHD9-208ENST00000563410 BAG6P46379 1132 aa30.15■■■□□ 2.42
CHD9-208ENST00000563410 NLRP13Q86W25 1043 aa30.15■■■□□ 2.42
CHD9-208ENST00000563410 CABP1Q9NZU7 370 aa30.15■■■□□ 2.42
CHD9-208ENST00000563410 USP6P35125 1406 aa30.14■■■□□ 2.42
CHD9-208ENST00000563410 GCP02774 474 aa30.13■■■□□ 2.41
CHD9-208ENST00000563410 NEUROD1Q13562 356 aa30.13■■■□□ 2.41
CHD9-208ENST00000563410 EVA1CP58658 441 aa30.1■■■□□ 2.41
CHD9-208ENST00000563410 USP35Q9P2H5 1018 aa30.1■■■□□ 2.41
CHD9-208ENST00000563410 EVC2Q86UK5 1308 aa30.1■■■□□ 2.41
CHD9-208ENST00000563410 ROCK2O75116 1388 aaKnown RBP30.1■■■□□ 2.41
CHD9-208ENST00000563410 PIK3C2AO00443 1686 aa30.09■■■□□ 2.41
CHD9-208ENST00000563410 SLIT3O75094 1523 aa30.09■■■□□ 2.41
CHD9-208ENST00000563410 LARP1Q6PKG0 1096 aaKnown RBP30.09■■■□□ 2.41
CHD9-208ENST00000563410 BARGINQ6ZT62 677 aa30.09■■■□□ 2.41
CHD9-208ENST00000563410 AKAP12Q02952 1782 aa30.08■■■□□ 2.41
CHD9-208ENST00000563410 EN1Q05925 392 aaPredicted RBP30.08■■■□□ 2.41
CHD9-208ENST00000563410 DISP2A7MBM2 1401 aa30.07■■■□□ 2.4
CHD9-208ENST00000563410 COL5A2P05997 1499 aaPredicted RBP30.06■■■□□ 2.4
CHD9-208ENST00000563410 NLRP6P59044 892 aa30.05■■■□□ 2.4
CHD9-208ENST00000563410 COL18A1P39060 1754 aa30.04■■■□□ 2.4
CHD9-208ENST00000563410 FAM196AQ6ZSG2 479 aa30.03■■■□□ 2.4
CHD9-208ENST00000563410 TCP11L2Q8N4U5 519 aa30.03■■■□□ 2.4
CHD9-208ENST00000563410 LRP5O75197 1615 aa30.03■■■□□ 2.4
CHD9-208ENST00000563410 PARP4Q9UKK3 1724 aaKnown RBP30.02■■■□□ 2.4
CHD9-208ENST00000563410 PSDA5PKW4 1024 aaPredicted RBP30■■■□□ 2.39
CHD9-208ENST00000563410 TRIM37O94972 964 aa30■■■□□ 2.39
CHD9-208ENST00000563410 THRAP3Q9Y2W1 955 aaKnown RBP30■■■□□ 2.39
CHD9-208ENST00000563410 AATKQ6ZMQ8 1374 aa29.99■■■□□ 2.39
CHD9-208ENST00000563410 CRB1P82279 1406 aa29.97■■■□□ 2.39
CHD9-208ENST00000563410 PDE3BQ13370 1112 aa29.97■■■□□ 2.39
CHD9-208ENST00000563410 EZH2Q15910 746 aaKnown RBP29.97■■■□□ 2.39
CHD9-208ENST00000563410 RGPD5Q99666 1765 aa29.97■■■□□ 2.39
CHD9-208ENST00000563410 TTC21BQ7Z4L5 1316 aa29.96■■■□□ 2.39
CHD9-208ENST00000563410 ZBTB7CA1YPR0 619 aa29.96■■■□□ 2.39
CHD9-208ENST00000563410 CAMKK2Q96RR4 588 aa29.96■■■□□ 2.39
CHD9-208ENST00000563410 ZNF692Q9BU19 519 aaPredicted RBP29.96■■■□□ 2.39
CHD9-208ENST00000563410 CPSF1Q10570 1443 aaKnown RBP29.96■■■□□ 2.39
CHD9-208ENST00000563410 MON2Q7Z3U7 1717 aa29.94■■■□□ 2.38
CHD9-208ENST00000563410 SBNO2Q9Y2G9 1366 aa29.93■■■□□ 2.38
CHD9-208ENST00000563410 RREB1Q92766 1687 aa29.93■■■□□ 2.38
CHD9-208ENST00000563410 WNK3Q9BYP7 1800 aa29.93■■■□□ 2.38
CHD9-208ENST00000563410 APBA3O96018 575 aa29.91■■■□□ 2.38
CHD9-208ENST00000563410 AXIN2Q9Y2T1 843 aa29.91■■■□□ 2.38
CHD9-208ENST00000563410 TTC21AQ8NDW8 1320 aa29.91■■■□□ 2.38
CHD9-208ENST00000563410 PEAK1Q9H792 1746 aa29.91■■■□□ 2.38
CHD9-208ENST00000563410 LRRC37A3O60309 1634 aa29.9■■■□□ 2.38
CHD9-208ENST00000563410 R3HDM1Q15032 1099 aaKnown RBP29.89■■■□□ 2.38
CHD9-208ENST00000563410 ARHGEF25Q86VW2 580 aa29.89■■■□□ 2.38
CHD9-208ENST00000563410 SBF2Q86WG5 1849 aa29.89■■■□□ 2.38
CHD9-208ENST00000563410 KTN1Q86UP2 1357 aaKnown RBP29.89■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms