RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 ESCO1Q5FWF5 840 aa8.8□□□□□ -1
CNOT1-204ENST00000563130 PHLPP1O60346 1717 aa8.8□□□□□ -1
CNOT1-204ENST00000563130 EIF3AQ14152 1382 aaKnown RBP8.8□□□□□ -1
CNOT1-204ENST00000563130 SBNO2Q9Y2G9 1366 aa8.8□□□□□ -1
CNOT1-204ENST00000563130 SOS2Q07890 1332 aaPredicted RBP8.8□□□□□ -1
CNOT1-204ENST00000563130 ATP7BP35670 1465 aa8.79□□□□□ -1
CNOT1-204ENST00000563130 DDX17Q92841 729 aaKnown RBP8.79□□□□□ -1
CNOT1-204ENST00000563130 QRICH2Q9H0J4 1663 aa8.78□□□□□ -1
CNOT1-204ENST00000563130 CDK19Q9BWU1 502 aa8.78□□□□□ -1
CNOT1-204ENST00000563130 NPHP3Q7Z494 1330 aa8.78□□□□□ -1
CNOT1-204ENST00000563130 JCADQ9P266 1359 aa8.78□□□□□ -1
CNOT1-204ENST00000563130 FOXO3O43524 673 aa8.78□□□□□ -1
CNOT1-204ENST00000563130 SPOCK2Q92563 424 aa8.78□□□□□ -1
CNOT1-204ENST00000563130 PHF8Q9UPP1 1060 aa8.78□□□□□ -1
CNOT1-204ENST00000563130 RGPD8O14715 1765 aaPredicted RBP8.78□□□□□ -1
CNOT1-204ENST00000563130 KIF1AQ12756 1690 aa8.78□□□□□ -1
CNOT1-204ENST00000563130 PXDNQ92626 1479 aa8.77□□□□□ -1
CNOT1-204ENST00000563130 NUDT16Q96DE0 195 aaKnown RBP8.77□□□□□ -1.01
CNOT1-204ENST00000563130 HAX1O00165 279 aa8.77□□□□□ -1.01
CNOT1-204ENST00000563130 LRRC59Q96AG4 307 aaKnown RBP8.77□□□□□ -1.01
CNOT1-204ENST00000563130 TESK2Q96S53 571 aa8.76□□□□□ -1.01
CNOT1-204ENST00000563130 CCDC61Q9Y6R9 512 aa8.76□□□□□ -1.01
CNOT1-204ENST00000563130 C19orf67A6NJJ6 358 aa8.75□□□□□ -1.01
CNOT1-204ENST00000563130 EVC2Q86UK5 1308 aa8.75□□□□□ -1.01
CNOT1-204ENST00000563130 SHPRHQ149N8 1683 aa8.75□□□□□ -1.01
CNOT1-204ENST00000563130 TOPAZ1Q8N9V7 1692 aa8.75□□□□□ -1.01
CNOT1-204ENST00000563130 ST20-MTHFSA0A0A6YYL1 179 aa8.75□□□□□ -1.01
CNOT1-204ENST00000563130 PLEKHG3A1L390 1219 aa8.75□□□□□ -1.01
CNOT1-204ENST00000563130 PMFBP1Q8TBY8 1022 aa8.75□□□□□ -1.01
CNOT1-204ENST00000563130 CABP2Q9NPB3 220 aa8.75□□□□□ -1.01
CNOT1-204ENST00000563130 PNPLA6Q8IY17 1366 aa8.75□□□□□ -1.01
CNOT1-204ENST00000563130 USP47Q96K76 1375 aa8.75□□□□□ -1.01
CNOT1-204ENST00000563130 SRPK2P78362 688 aaKnown RBP8.74□□□□□ -1.01
CNOT1-204ENST00000563130 SPATA31A6Q5VVP1 1343 aa8.74□□□□□ -1.01
CNOT1-204ENST00000563130 POLR3AO14802 1390 aaPredicted RBP8.74□□□□□ -1.01
CNOT1-204ENST00000563130 PAK3O75914 559 aaPredicted RBP8.74□□□□□ -1.01
CNOT1-204ENST00000563130 NUBP1P53384 320 aa8.74□□□□□ -1.01
CNOT1-204ENST00000563130 KRT28Q7Z3Y7 464 aa8.74□□□□□ -1.01
CNOT1-204ENST00000563130 ITSN1Q15811 1721 aa8.74□□□□□ -1.01
CNOT1-204ENST00000563130 MED1Q15648 1581 aaPredicted RBP8.73□□□□□ -1.01
CNOT1-204ENST00000563130 CD44P16070 742 aaKnown RBP8.73□□□□□ -1.01
CNOT1-204ENST00000563130 XPCQ01831 940 aaPredicted RBP8.73□□□□□ -1.01
CNOT1-204ENST00000563130 PUS7Q96PZ0 661 aaKnown RBP8.73□□□□□ -1.01
CNOT1-204ENST00000563130 SPATA31A3Q5VYP0 1347 aa8.73□□□□□ -1.01
CNOT1-204ENST00000563130 SBNO1A3KN83 1393 aa8.73□□□□□ -1.01
CNOT1-204ENST00000563130 PSME1Q06323 249 aa8.72□□□□□ -1.01
CNOT1-204ENST00000563130 PPIP5K1Q6PFW1 1433 aa8.72□□□□□ -1.01
CNOT1-204ENST00000563130 LRP6O75581 1613 aa8.72□□□□□ -1.01
CNOT1-204ENST00000563130 COL22A1Q8NFW1 1626 aaPredicted RBP8.72□□□□□ -1.01
CNOT1-204ENST00000563130 TNS3Q68CZ2 1445 aa8.72□□□□□ -1.01
CNOT1-204ENST00000563130 ATAD2Q6PL18 1390 aa8.72□□□□□ -1.01
CNOT1-204ENST00000563130 ACEP12821 1306 aa8.71□□□□□ -1.01
CNOT1-204ENST00000563130 NGDNQ8NEJ9 315 aaKnown RBP8.71□□□□□ -1.01
CNOT1-204ENST00000563130 TRPM3Q9HCF6 1732 aaPredicted RBP8.71□□□□□ -1.01
CNOT1-204ENST00000563130 CABP1Q9NZU7 370 aa8.71□□□□□ -1.02
CNOT1-204ENST00000563130 RASEFQ8IZ41 740 aa8.7□□□□□ -1.02
CNOT1-204ENST00000563130 FAM212AQ96EL1 285 aa8.7□□□□□ -1.02
CNOT1-204ENST00000563130 DISP3Q9P2K9 1392 aa8.69□□□□□ -1.02
CNOT1-204ENST00000563130 CPSF1Q10570 1443 aaKnown RBP8.69□□□□□ -1.02
CNOT1-204ENST00000563130 SSH2Q76I76 1423 aa8.69□□□□□ -1.02
CNOT1-204ENST00000563130 ALS2Q96Q42 1657 aa8.69□□□□□ -1.02
CNOT1-204ENST00000563130 ARHGEF10O15013 1369 aa8.69□□□□□ -1.02
CNOT1-204ENST00000563130 BRD4O60885 1362 aaPredicted RBP8.69□□□□□ -1.02
CNOT1-204ENST00000563130 USP6P35125 1406 aa8.69□□□□□ -1.02
CNOT1-204ENST00000563130 CD163L1Q9NR16 1453 aa8.68□□□□□ -1.02
CNOT1-204ENST00000563130 EIF4G2P78344 907 aaKnown RBP eCLIP8.68□□□□□ -1.02
CNOT1-204ENST00000563130 TMF1P82094 1093 aa8.68□□□□□ -1.02
CNOT1-204ENST00000563130 RGS17Q9UGC6 210 aaPredicted RBP8.68□□□□□ -1.02
CNOT1-204ENST00000563130 GSE1Q14687 1217 aa8.68□□□□□ -1.02
CNOT1-204ENST00000563130 TSPYL2Q9H2G4 693 aaPredicted RBP8.68□□□□□ -1.02
CNOT1-204ENST00000563130 ZRANB1Q9UGI0 708 aa8.68□□□□□ -1.02
CNOT1-204ENST00000563130 NUTM2BA6NNL0 878 aaPredicted RBP8.67□□□□□ -1.02
CNOT1-204ENST00000563130 NUTM2EB1AL46 878 aaPredicted RBP8.67□□□□□ -1.02
CNOT1-204ENST00000563130 HSPA5P11021 654 aaKnown RBP8.67□□□□□ -1.02
CNOT1-204ENST00000563130 DCAF8Q5TAQ9 597 aa8.67□□□□□ -1.02
CNOT1-204ENST00000563130 NUTM2AQ8IVF1 878 aaPredicted RBP8.67□□□□□ -1.02
CNOT1-204ENST00000563130 SLC12A5Q9H2X9 1139 aa8.67□□□□□ -1.02
CNOT1-204ENST00000563130 NINLQ9Y2I6 1382 aa8.67□□□□□ -1.02
CNOT1-204ENST00000563130 AKAP12Q02952 1782 aa8.66□□□□□ -1.02
CNOT1-204ENST00000563130 CDCA8Q53HL2 280 aa8.65□□□□□ -1.02
CNOT1-204ENST00000563130 CRYBG1Q9Y4K1 1723 aa8.65□□□□□ -1.02
CNOT1-204ENST00000563130 LMOD2Q6P5Q4 547 aa8.65□□□□□ -1.03
CNOT1-204ENST00000563130 CABLES1Q8TDN4 633 aa8.65□□□□□ -1.03
CNOT1-204ENST00000563130 NRKQ7Z2Y5 1582 aa8.65□□□□□ -1.03
CNOT1-204ENST00000563130 ABCA3Q99758 1704 aa8.65□□□□□ -1.03
CNOT1-204ENST00000563130 A0A1W2PP64 1363 aa8.64□□□□□ -1.03
CNOT1-204ENST00000563130 KTN1Q86UP2 1357 aaKnown RBP8.64□□□□□ -1.03
CNOT1-204ENST00000563130 ADAMTS2O95450 1211 aa8.64□□□□□ -1.03
CNOT1-204ENST00000563130 FNBP4Q8N3X1 1017 aaPredicted RBP8.64□□□□□ -1.03
CNOT1-204ENST00000563130 ABTB2Q8N961 1025 aa8.64□□□□□ -1.03
CNOT1-204ENST00000563130 TMC1Q8TDI8 760 aa8.64□□□□□ -1.03
CNOT1-204ENST00000563130 MON2Q7Z3U7 1717 aa8.64□□□□□ -1.03
CNOT1-204ENST00000563130 USP19O94966 1318 aa8.64□□□□□ -1.03
CNOT1-204ENST00000563130 TTC21BQ7Z4L5 1316 aa8.64□□□□□ -1.03
CNOT1-204ENST00000563130 EVX2Q03828 476 aa8.64□□□□□ -1.03
CNOT1-204ENST00000563130 MEX3CQ5U5Q3 659 aaKnown RBP8.64□□□□□ -1.03
CNOT1-204ENST00000563130 TERF2IPQ9NYB0 399 aa8.64□□□□□ -1.03
CNOT1-204ENST00000563130 CIZ1Q9ULV3 898 aaPredicted RBP8.64□□□□□ -1.03
CNOT1-204ENST00000563130 TTC21AQ8NDW8 1320 aa8.63□□□□□ -1.03
CNOT1-204ENST00000563130 C8orf37Q96NL8 207 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms