RNA–Protein interactions for RNA: ENST00000562927.2

ABCD1P3-201, Transcript of ATP binding cassette subfamily D member 1 pseudogene 3, humanhuman

BASIC

Gene ABCD1P3, Length 605 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD1P3-201ENST00000562927 CCDC61Q9Y6R9 512 aa18.29■□□□□ 0.52
ABCD1P3-201ENST00000562927 BLMP54132 1417 aaPredicted RBP18.29■□□□□ 0.52
ABCD1P3-201ENST00000562927 PLEKHG3A1L390 1219 aa18.28■□□□□ 0.52
ABCD1P3-201ENST00000562927 ZRANB1Q9UGI0 708 aa18.28■□□□□ 0.52
ABCD1P3-201ENST00000562927 KIAA1210Q9ULL0 1709 aa18.28■□□□□ 0.52
ABCD1P3-201ENST00000562927 POLR3AO14802 1390 aaPredicted RBP18.28■□□□□ 0.52
ABCD1P3-201ENST00000562927 NBPF8Q3BBV2 869 aa18.27■□□□□ 0.52
ABCD1P3-201ENST00000562927 KRT27Q7Z3Y8 459 aa18.27■□□□□ 0.52
ABCD1P3-201ENST00000562927 ACEP12821 1306 aa18.26■□□□□ 0.51
ABCD1P3-201ENST00000562927 FAM98CQ17RN3 349 aaKnown RBP18.25■□□□□ 0.51
ABCD1P3-201ENST00000562927 PRDM11Q9NQV5 511 aa18.25■□□□□ 0.51
ABCD1P3-201ENST00000562927 COL14A1Q05707 1796 aaKnown RBP18.25■□□□□ 0.51
ABCD1P3-201ENST00000562927 SPATA31A5Q5VU36 1347 aa18.23■□□□□ 0.51
ABCD1P3-201ENST00000562927 SPATA31A7Q8IWB4 1347 aa18.23■□□□□ 0.51
ABCD1P3-201ENST00000562927 CENPJQ9HC77 1338 aaPredicted RBP18.23■□□□□ 0.51
ABCD1P3-201ENST00000562927 ITSN1Q15811 1721 aa18.23■□□□□ 0.51
ABCD1P3-201ENST00000562927 L3MBTL2Q969R5 705 aa18.23■□□□□ 0.51
ABCD1P3-201ENST00000562927 NRAPQ86VF7 1730 aa18.23■□□□□ 0.51
ABCD1P3-201ENST00000562927 KIAA0232Q92628 1395 aa18.22■□□□□ 0.51
ABCD1P3-201ENST00000562927 A0A0G2JS52 829 aa18.22■□□□□ 0.51
ABCD1P3-201ENST00000562927 MYT1Q01538 1121 aa18.22■□□□□ 0.51
ABCD1P3-201ENST00000562927 SF3B2Q13435 895 aaKnown RBP18.22■□□□□ 0.51
ABCD1P3-201ENST00000562927 CRYBG1Q9Y4K1 1723 aa18.22■□□□□ 0.51
ABCD1P3-201ENST00000562927 BRWD3Q6RI45 1802 aa18.21■□□□□ 0.51
ABCD1P3-201ENST00000562927 SRPK2P78362 688 aaKnown RBP18.21■□□□□ 0.51
ABCD1P3-201ENST00000562927 NUTM2GQ5VZR2 741 aa18.21■□□□□ 0.51
ABCD1P3-201ENST00000562927 DEFB132Q7Z7B7 95 aa18.21■□□□□ 0.51
ABCD1P3-201ENST00000562927 TOPAZ1Q8N9V7 1692 aa18.2■□□□□ 0.5
ABCD1P3-201ENST00000562927 ZC3H6P61129 1189 aaKnown RBP18.2■□□□□ 0.5
ABCD1P3-201ENST00000562927 CHRNA2Q15822 529 aa18.2■□□□□ 0.5
ABCD1P3-201ENST00000562927 ABTB2Q8N961 1025 aa18.19■□□□□ 0.5
ABCD1P3-201ENST00000562927 CABP2Q9NPB3 220 aa18.19■□□□□ 0.5
ABCD1P3-201ENST00000562927 PPIP5K1Q6PFW1 1433 aa18.18■□□□□ 0.5
ABCD1P3-201ENST00000562927 SIN3AQ96ST3 1273 aa18.18■□□□□ 0.5
ABCD1P3-201ENST00000562927 SPATA31A1Q5TZJ5 1347 aa18.18■□□□□ 0.5
ABCD1P3-201ENST00000562927 USP19O94966 1318 aa18.16■□□□□ 0.5
ABCD1P3-201ENST00000562927 BRD4O60885 1362 aaPredicted RBP18.16■□□□□ 0.5
ABCD1P3-201ENST00000562927 NLRP13Q86W25 1043 aa18.15■□□□□ 0.5
ABCD1P3-201ENST00000562927 STRN4Q9NRL3 753 aa18.15■□□□□ 0.5
ABCD1P3-201ENST00000562927 CABP1Q9NZU7 370 aa18.15■□□□□ 0.5
ABCD1P3-201ENST00000562927 PHRF1Q9P1Y6 1649 aaKnown RBP18.15■□□□□ 0.5
ABCD1P3-201ENST00000562927 CPDO75976 1380 aa18.15■□□□□ 0.5
ABCD1P3-201ENST00000562927 NEUROD1Q13562 356 aa18.14■□□□□ 0.49
ABCD1P3-201ENST00000562927 FAM182BQ5T319 152 aa18.14■□□□□ 0.49
ABCD1P3-201ENST00000562927 GCP02774 474 aa18.13■□□□□ 0.49
ABCD1P3-201ENST00000562927 BAG6P46379 1132 aa18.13■□□□□ 0.49
ABCD1P3-201ENST00000562927 EVA1CP58658 441 aa18.13■□□□□ 0.49
ABCD1P3-201ENST00000562927 THSD7AQ9UPZ6 1657 aa18.12■□□□□ 0.49
ABCD1P3-201ENST00000562927 EVC2Q86UK5 1308 aa18.12■□□□□ 0.49
ABCD1P3-201ENST00000562927 BARGINQ6ZT62 677 aa18.11■□□□□ 0.49
ABCD1P3-201ENST00000562927 SSH2Q76I76 1423 aa18.11■□□□□ 0.49
ABCD1P3-201ENST00000562927 NRKQ7Z2Y5 1582 aa18.11■□□□□ 0.49
ABCD1P3-201ENST00000562927 CAMTA1Q9Y6Y1 1673 aa18.11■□□□□ 0.49
ABCD1P3-201ENST00000562927 USP6P35125 1406 aa18.1■□□□□ 0.49
ABCD1P3-201ENST00000562927 LARP1Q6PKG0 1096 aaKnown RBP18.1■□□□□ 0.49
ABCD1P3-201ENST00000562927 QRICH2Q9H0J4 1663 aa18.09■□□□□ 0.49
ABCD1P3-201ENST00000562927 ROCK2O75116 1388 aaKnown RBP18.09■□□□□ 0.49
ABCD1P3-201ENST00000562927 USP35Q9P2H5 1018 aa18.09■□□□□ 0.49
ABCD1P3-201ENST00000562927 NLRP6P59044 892 aa18.08■□□□□ 0.48
ABCD1P3-201ENST00000562927 FAM196AQ6ZSG2 479 aa18.08■□□□□ 0.48
ABCD1P3-201ENST00000562927 TRPM1Q7Z4N2 1603 aa18.08■□□□□ 0.48
ABCD1P3-201ENST00000562927 EN1Q05925 392 aaPredicted RBP18.07■□□□□ 0.48
ABCD1P3-201ENST00000562927 TCP11L2Q8N4U5 519 aa18.07■□□□□ 0.48
ABCD1P3-201ENST00000562927 LMO7Q8WWI1 1683 aa18.06■□□□□ 0.48
ABCD1P3-201ENST00000562927 ZNF692Q9BU19 519 aaPredicted RBP18.06■□□□□ 0.48
ABCD1P3-201ENST00000562927 THRAP3Q9Y2W1 955 aaKnown RBP18.06■□□□□ 0.48
ABCD1P3-201ENST00000562927 DISP2A7MBM2 1401 aa18.06■□□□□ 0.48
ABCD1P3-201ENST00000562927 PDE3BQ13370 1112 aa18.05■□□□□ 0.48
ABCD1P3-201ENST00000562927 AATKQ6ZMQ8 1374 aa18.04■□□□□ 0.48
ABCD1P3-201ENST00000562927 COL5A2P05997 1499 aaPredicted RBP18.03■□□□□ 0.48
ABCD1P3-201ENST00000562927 TRIM37O94972 964 aa18.03■□□□□ 0.48
ABCD1P3-201ENST00000562927 SLIT3O75094 1523 aa18.03■□□□□ 0.48
ABCD1P3-201ENST00000562927 PSDA5PKW4 1024 aaPredicted RBP18.02■□□□□ 0.48
ABCD1P3-201ENST00000562927 RGPD1P0DJD0 1748 aa18.02■□□□□ 0.48
ABCD1P3-201ENST00000562927 CAMKK2Q96RR4 588 aa18.02■□□□□ 0.48
ABCD1P3-201ENST00000562927 TTC21BQ7Z4L5 1316 aa18.01■□□□□ 0.47
ABCD1P3-201ENST00000562927 CRB1P82279 1406 aa18.01■□□□□ 0.47
ABCD1P3-201ENST00000562927 EZH2Q15910 746 aaKnown RBP18.01■□□□□ 0.47
ABCD1P3-201ENST00000562927 CPSF1Q10570 1443 aaKnown RBP18■□□□□ 0.47
ABCD1P3-201ENST00000562927 ZBTB7CA1YPR0 619 aa18■□□□□ 0.47
ABCD1P3-201ENST00000562927 APBA3O96018 575 aa18■□□□□ 0.47
ABCD1P3-201ENST00000562927 SBNO2Q9Y2G9 1366 aa18■□□□□ 0.47
ABCD1P3-201ENST00000562927 TTC21AQ8NDW8 1320 aa17.99■□□□□ 0.47
ABCD1P3-201ENST00000562927 KCNH5Q8NCM2 988 aa17.99■□□□□ 0.47
ABCD1P3-201ENST00000562927 CARD11Q9BXL7 1154 aa17.99■□□□□ 0.47
ABCD1P3-201ENST00000562927 AXIN2Q9Y2T1 843 aa17.99■□□□□ 0.47
ABCD1P3-201ENST00000562927 ARHGEF25Q86VW2 580 aa17.98■□□□□ 0.47
ABCD1P3-201ENST00000562927 PARD3Q8TEW0 1356 aa17.98■□□□□ 0.47
ABCD1P3-201ENST00000562927 PIK3C2AO00443 1686 aa17.98■□□□□ 0.47
ABCD1P3-201ENST00000562927 TNS1Q9HBL0 1735 aaKnown RBP17.98■□□□□ 0.47
ABCD1P3-201ENST00000562927 KTN1Q86UP2 1357 aaKnown RBP17.97■□□□□ 0.47
ABCD1P3-201ENST00000562927 R3HDM1Q15032 1099 aaKnown RBP17.97■□□□□ 0.47
ABCD1P3-201ENST00000562927 C11orf95C9JLR9 678 aaPredicted RBP17.96■□□□□ 0.47
ABCD1P3-201ENST00000562927 TOM1L2Q6ZVM7 507 aa17.96■□□□□ 0.47
ABCD1P3-201ENST00000562927 WDR17Q8IZU2 1322 aa17.96■□□□□ 0.46
ABCD1P3-201ENST00000562927 TONSLQ96HA7 1378 aa17.94■□□□□ 0.46
ABCD1P3-201ENST00000562927 LRP5O75197 1615 aa17.94■□□□□ 0.46
ABCD1P3-201ENST00000562927 DDB1Q16531 1140 aa17.93■□□□□ 0.46
ABCD1P3-201ENST00000562927 PARP4Q9UKK3 1724 aaKnown RBP17.92■□□□□ 0.46
ABCD1P3-201ENST00000562927 COL18A1P39060 1754 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms