RNA–Protein interactions for RNA: ENST00000562829.1

TNRC6A-209, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 277 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-209ENST00000562829 FAM83GA6ND36 823 aa24.15■■□□□ 1.46
TNRC6A-209ENST00000562829 CCDC61Q9Y6R9 512 aa24.15■■□□□ 1.46
TNRC6A-209ENST00000562829 SRPK2P78362 688 aaKnown RBP24.14■■□□□ 1.45
TNRC6A-209ENST00000562829 QRICH2Q9H0J4 1663 aa24.13■■□□□ 1.45
TNRC6A-209ENST00000562829 ACEP12821 1306 aa24.12■■□□□ 1.45
TNRC6A-209ENST00000562829 COL14A1Q05707 1796 aaKnown RBP24.12■■□□□ 1.45
TNRC6A-209ENST00000562829 BTG4Q9NY30 223 aa24.12■■□□□ 1.45
TNRC6A-209ENST00000562829 CRYBG1Q9Y4K1 1723 aa24.12■■□□□ 1.45
TNRC6A-209ENST00000562829 NRAPQ86VF7 1730 aa24.11■■□□□ 1.45
TNRC6A-209ENST00000562829 TRPM1Q7Z4N2 1603 aa24.1■■□□□ 1.45
TNRC6A-209ENST00000562829 A0A0G2JS52 829 aa24.1■■□□□ 1.45
TNRC6A-209ENST00000562829 MYT1Q01538 1121 aa24.1■■□□□ 1.45
TNRC6A-209ENST00000562829 SEPT12Q8IYM1 358 aa24.1■■□□□ 1.45
TNRC6A-209ENST00000562829 POLR3AO14802 1390 aaPredicted RBP24.1■■□□□ 1.45
TNRC6A-209ENST00000562829 NBPF8Q3BBV2 869 aa24.09■■□□□ 1.45
TNRC6A-209ENST00000562829 NUTM2GQ5VZR2 741 aa24.09■■□□□ 1.45
TNRC6A-209ENST00000562829 CABP2Q9NPB3 220 aa24.09■■□□□ 1.45
TNRC6A-209ENST00000562829 PRDM11Q9NQV5 511 aa24.09■■□□□ 1.45
TNRC6A-209ENST00000562829 BRWD3Q6RI45 1802 aa24.09■■□□□ 1.45
TNRC6A-209ENST00000562829 PLEKHG3A1L390 1219 aa24.08■■□□□ 1.45
TNRC6A-209ENST00000562829 PPIP5K1Q6PFW1 1433 aa24.08■■□□□ 1.44
TNRC6A-209ENST00000562829 ROCK2O75116 1388 aaKnown RBP24.07■■□□□ 1.44
TNRC6A-209ENST00000562829 PHRF1Q9P1Y6 1649 aaKnown RBP24.06■■□□□ 1.44
TNRC6A-209ENST00000562829 CCDC125Q86Z20 511 aa24.05■■□□□ 1.44
TNRC6A-209ENST00000562829 KIAA0232Q92628 1395 aa24.04■■□□□ 1.44
TNRC6A-209ENST00000562829 ZC3H6P61129 1189 aaKnown RBP24.03■■□□□ 1.44
TNRC6A-209ENST00000562829 FAM98CQ17RN3 349 aaKnown RBP24.03■■□□□ 1.44
TNRC6A-209ENST00000562829 ABTB2Q8N961 1025 aa24.03■■□□□ 1.44
TNRC6A-209ENST00000562829 CHRNA2Q15822 529 aa24.02■■□□□ 1.44
TNRC6A-209ENST00000562829 EP400Q96L91 3159 aa24.01■■□□□ 1.43
TNRC6A-209ENST00000562829 ONECUT3O60422 494 aaPredicted RBP24.01■■□□□ 1.43
TNRC6A-209ENST00000562829 KRT27Q7Z3Y8 459 aa24.01■■□□□ 1.43
TNRC6A-209ENST00000562829 EVC2Q86UK5 1308 aa24■■□□□ 1.43
TNRC6A-209ENST00000562829 BLMP54132 1417 aaPredicted RBP24■■□□□ 1.43
TNRC6A-209ENST00000562829 CABP1Q9NZU7 370 aa23.99■■□□□ 1.43
TNRC6A-209ENST00000562829 SF3B2Q13435 895 aaKnown RBP23.98■■□□□ 1.43
TNRC6A-209ENST00000562829 STRN4Q9NRL3 753 aa23.98■■□□□ 1.43
TNRC6A-209ENST00000562829 SPATA31A5Q5VU36 1347 aa23.98■■□□□ 1.43
TNRC6A-209ENST00000562829 SPATA31A7Q8IWB4 1347 aa23.98■■□□□ 1.43
TNRC6A-209ENST00000562829 NRKQ7Z2Y5 1582 aa23.98■■□□□ 1.43
TNRC6A-209ENST00000562829 NLRP13Q86W25 1043 aa23.96■■□□□ 1.43
TNRC6A-209ENST00000562829 TONSLQ96HA7 1378 aa23.95■■□□□ 1.42
TNRC6A-209ENST00000562829 USP6P35125 1406 aa23.94■■□□□ 1.42
TNRC6A-209ENST00000562829 USP19O94966 1318 aa23.94■■□□□ 1.42
TNRC6A-209ENST00000562829 ZRANB1Q9UGI0 708 aa23.94■■□□□ 1.42
TNRC6A-209ENST00000562829 BRD4O60885 1362 aaPredicted RBP23.93■■□□□ 1.42
TNRC6A-209ENST00000562829 EVA1CP58658 441 aa23.93■■□□□ 1.42
TNRC6A-209ENST00000562829 DEFB132Q7Z7B7 95 aa23.91■■□□□ 1.42
TNRC6A-209ENST00000562829 CARD11Q9BXL7 1154 aa23.91■■□□□ 1.42
TNRC6A-209ENST00000562829 SPATA31A1Q5TZJ5 1347 aa23.9■■□□□ 1.42
TNRC6A-209ENST00000562829 THSD7AQ9UPZ6 1657 aa23.9■■□□□ 1.42
TNRC6A-209ENST00000562829 ZBTB7CA1YPR0 619 aa23.9■■□□□ 1.42
TNRC6A-209ENST00000562829 GCP02774 474 aa23.9■■□□□ 1.42
TNRC6A-209ENST00000562829 NLRP6P59044 892 aa23.9■■□□□ 1.42
TNRC6A-209ENST00000562829 USP35Q9P2H5 1018 aa23.9■■□□□ 1.42
TNRC6A-209ENST00000562829 CPDO75976 1380 aa23.9■■□□□ 1.42
TNRC6A-209ENST00000562829 TRIM26Q12899 539 aaPredicted RBP23.89■■□□□ 1.41
TNRC6A-209ENST00000562829 SSH2Q76I76 1423 aa23.89■■□□□ 1.41
TNRC6A-209ENST00000562829 CAMTA1Q9Y6Y1 1673 aa23.87■■□□□ 1.41
TNRC6A-209ENST00000562829 FAM182BQ5T319 152 aa23.87■■□□□ 1.41
TNRC6A-209ENST00000562829 LMO7Q8WWI1 1683 aa23.86■■□□□ 1.41
TNRC6A-209ENST00000562829 LARP1Q6PKG0 1096 aaKnown RBP23.85■■□□□ 1.41
TNRC6A-209ENST00000562829 PIK3C2AO00443 1686 aa23.85■■□□□ 1.41
TNRC6A-209ENST00000562829 AKAP12Q02952 1782 aa23.85■■□□□ 1.41
TNRC6A-209ENST00000562829 BAG6P46379 1132 aa23.84■■□□□ 1.41
TNRC6A-209ENST00000562829 ZNF692Q9BU19 519 aaPredicted RBP23.84■■□□□ 1.41
TNRC6A-209ENST00000562829 SLIT3O75094 1523 aa23.83■■□□□ 1.41
TNRC6A-209ENST00000562829 SBNO2Q9Y2G9 1366 aa23.82■■□□□ 1.4
TNRC6A-209ENST00000562829 TTC21BQ7Z4L5 1316 aa23.82■■□□□ 1.4
TNRC6A-209ENST00000562829 RGPD1P0DJD0 1748 aa23.81■■□□□ 1.4
TNRC6A-209ENST00000562829 COL5A2P05997 1499 aaPredicted RBP23.81■■□□□ 1.4
TNRC6A-209ENST00000562829 KTN1Q86UP2 1357 aaKnown RBP23.8■■□□□ 1.4
TNRC6A-209ENST00000562829 BARGINQ6ZT62 677 aa23.8■■□□□ 1.4
TNRC6A-209ENST00000562829 TCP11L2Q8N4U5 519 aa23.8■■□□□ 1.4
TNRC6A-209ENST00000562829 TTC21AQ8NDW8 1320 aa23.79■■□□□ 1.4
TNRC6A-209ENST00000562829 SOX12O15370 315 aa23.78■■□□□ 1.4
TNRC6A-209ENST00000562829 AATKQ6ZMQ8 1374 aa23.78■■□□□ 1.4
TNRC6A-209ENST00000562829 CPSF1Q10570 1443 aaKnown RBP23.77■■□□□ 1.4
TNRC6A-209ENST00000562829 PDE3BQ13370 1112 aa23.77■■□□□ 1.4
TNRC6A-209ENST00000562829 TMC1Q8TDI8 760 aa23.77■■□□□ 1.4
TNRC6A-209ENST00000562829 MON2Q7Z3U7 1717 aa23.76■■□□□ 1.39
TNRC6A-209ENST00000562829 EN1Q05925 392 aaPredicted RBP23.75■■□□□ 1.39
TNRC6A-209ENST00000562829 FAM196AQ6ZSG2 479 aa23.75■■□□□ 1.39
TNRC6A-209ENST00000562829 KCNH5Q8NCM2 988 aa23.75■■□□□ 1.39
TNRC6A-209ENST00000562829 THRAP3Q9Y2W1 955 aaKnown RBP23.75■■□□□ 1.39
TNRC6A-209ENST00000562829 CRB1P82279 1406 aa23.75■■□□□ 1.39
TNRC6A-209ENST00000562829 TNS1Q9HBL0 1735 aaKnown RBP23.73■■□□□ 1.39
TNRC6A-209ENST00000562829 TRIM37O94972 964 aa23.73■■□□□ 1.39
TNRC6A-209ENST00000562829 TOM1L2Q6ZVM7 507 aa23.73■■□□□ 1.39
TNRC6A-209ENST00000562829 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.73■■□□□ 1.398e-9■□□□□ 10.8
TNRC6A-209ENST00000562829 HDGFL2Q7Z4V5 671 aaPredicted RBP23.72■■□□□ 1.39
TNRC6A-209ENST00000562829 COL18A1P39060 1754 aa23.71■■□□□ 1.39
TNRC6A-209ENST00000562829 ARHGEF25Q86VW2 580 aa23.7■■□□□ 1.38
TNRC6A-209ENST00000562829 PARP4Q9UKK3 1724 aaKnown RBP23.7■■□□□ 1.38
TNRC6A-209ENST00000562829 SLC12A5Q9H2X9 1139 aa23.69■■□□□ 1.38
TNRC6A-209ENST00000562829 AXIN2Q9Y2T1 843 aa23.69■■□□□ 1.38
TNRC6A-209ENST00000562829 CD163L1Q9NR16 1453 aa23.68■■□□□ 1.38
TNRC6A-209ENST00000562829 DISP2A7MBM2 1401 aa23.68■■□□□ 1.38
TNRC6A-209ENST00000562829 WDR17Q8IZU2 1322 aa23.68■■□□□ 1.38
TNRC6A-209ENST00000562829 CSB-PGBD3P0DP91 1061 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms