RNA–Protein interactions for RNA: ENST00000562659.1

GSE1-212, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 2

Gene GSE1, Length 756 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-212ENST00000562659 LRRC59Q96AG4 307 aaKnown RBP17.99■□□□□ 0.47
GSE1-212ENST00000562659 A0A1W2PP64 1363 aa17.99■□□□□ 0.47
GSE1-212ENST00000562659 PXDNQ92626 1479 aa17.99■□□□□ 0.47
GSE1-212ENST00000562659 POLR3GLQ9BT43 218 aa17.98■□□□□ 0.47
GSE1-212ENST00000562659 KTN1Q86UP2 1357 aaKnown RBP17.98■□□□□ 0.47
GSE1-212ENST00000562659 EDC4Q6P2E9 1401 aaKnown RBP17.97■□□□□ 0.47
GSE1-212ENST00000562659 TTC21AQ8NDW8 1320 aa17.97■□□□□ 0.47
GSE1-212ENST00000562659 PANK3Q9H999 370 aa17.96■□□□□ 0.47
GSE1-212ENST00000562659 SPATA31A3Q5VYP0 1347 aa17.96■□□□□ 0.46
GSE1-212ENST00000562659 NHSL1Q5SYE7 1610 aa17.95■□□□□ 0.46
GSE1-212ENST00000562659 DDX17Q92841 729 aaKnown RBP17.95■□□□□ 0.46
GSE1-212ENST00000562659 TTC21BQ7Z4L5 1316 aa17.95■□□□□ 0.46
GSE1-212ENST00000562659 CARD14Q9BXL6 1004 aa17.94■□□□□ 0.46
GSE1-212ENST00000562659 ARHGEF10O15013 1369 aa17.93■□□□□ 0.46
GSE1-212ENST00000562659 HSPA1LP34931 641 aa17.93■□□□□ 0.46
GSE1-212ENST00000562659 RGPD8O14715 1765 aaPredicted RBP17.93■□□□□ 0.46
GSE1-212ENST00000562659 TNS3Q68CZ2 1445 aa17.92■□□□□ 0.46
GSE1-212ENST00000562659 PER1O15534 1290 aaPredicted RBP17.92■□□□□ 0.46
GSE1-212ENST00000562659 NPM3O75607 178 aaKnown RBP17.92■□□□□ 0.46
GSE1-212ENST00000562659 XPCQ01831 940 aaPredicted RBP17.92■□□□□ 0.46
GSE1-212ENST00000562659 MYOM1P52179 1685 aa17.91■□□□□ 0.46
GSE1-212ENST00000562659 CGNL1Q0VF96 1302 aa17.9■□□□□ 0.46
GSE1-212ENST00000562659 COL16A1Q07092 1604 aaPredicted RBP17.9■□□□□ 0.46
GSE1-212ENST00000562659 USP31Q70CQ4 1352 aa17.9■□□□□ 0.46
GSE1-212ENST00000562659 JCADQ9P266 1359 aa17.9■□□□□ 0.46
GSE1-212ENST00000562659 PAK3O75914 559 aaPredicted RBP17.89■□□□□ 0.45
GSE1-212ENST00000562659 ABTB2Q8N961 1025 aa17.89■□□□□ 0.45
GSE1-212ENST00000562659 KNSTRNQ9Y448 316 aa17.89■□□□□ 0.45
GSE1-212ENST00000562659 NLRP13Q86W25 1043 aa17.88■□□□□ 0.45
GSE1-212ENST00000562659 NSD2O96028 1365 aa17.88■□□□□ 0.45
GSE1-212ENST00000562659 NPC1L1Q9UHC9 1359 aa17.88■□□□□ 0.45
GSE1-212ENST00000562659 NSD3Q9BZ95 1437 aa17.88■□□□□ 0.45
GSE1-212ENST00000562659 AKAP12Q02952 1782 aa17.87■□□□□ 0.45
GSE1-212ENST00000562659 FYB1O15117 783 aa17.87■□□□□ 0.45
GSE1-212ENST00000562659 PNPLA6Q8IY17 1366 aa17.87■□□□□ 0.45
GSE1-212ENST00000562659 TRPM3Q9HCF6 1732 aaPredicted RBP17.86■□□□□ 0.45
GSE1-212ENST00000562659 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.86■□□□□ 0.45
GSE1-212ENST00000562659 PHLPP1O60346 1717 aa17.86■□□□□ 0.45
GSE1-212ENST00000562659 MON2Q7Z3U7 1717 aa17.86■□□□□ 0.45
GSE1-212ENST00000562659 USP19O94966 1318 aa17.85■□□□□ 0.45
GSE1-212ENST00000562659 DDX10Q13206 875 aaKnown RBP17.85■□□□□ 0.45
GSE1-212ENST00000562659 AMER1Q5JTC6 1135 aaPredicted RBP17.85■□□□□ 0.45
GSE1-212ENST00000562659 SPATA31A6Q5VVP1 1343 aa17.85■□□□□ 0.45
GSE1-212ENST00000562659 NRKQ7Z2Y5 1582 aa17.85■□□□□ 0.45
GSE1-212ENST00000562659 NLRP6P59044 892 aa17.84■□□□□ 0.45
GSE1-212ENST00000562659 LMOD2Q6P5Q4 547 aa17.83■□□□□ 0.44
GSE1-212ENST00000562659 NME9Q86XW9 330 aa17.83■□□□□ 0.44
GSE1-212ENST00000562659 COG3Q96JB2 828 aa17.83■□□□□ 0.44
GSE1-212ENST00000562659 ALS2Q96Q42 1657 aa17.82■□□□□ 0.44
GSE1-212ENST00000562659 MED1Q15648 1581 aaPredicted RBP17.82■□□□□ 0.44
GSE1-212ENST00000562659 OVOS2A0A0J9YW53 1432 aa17.81■□□□□ 0.44
GSE1-212ENST00000562659 OVOS2Q6IE36 1432 aa17.81■□□□□ 0.44
GSE1-212ENST00000562659 KCNH5Q8NCM2 988 aa17.81■□□□□ 0.44
GSE1-212ENST00000562659 COL22A1Q8NFW1 1626 aaPredicted RBP17.8■□□□□ 0.44
GSE1-212ENST00000562659 GCP02774 474 aa17.79■□□□□ 0.44
GSE1-212ENST00000562659 ILDR1Q86SU0 546 aaPredicted RBP17.79■□□□□ 0.44
GSE1-212ENST00000562659 GGNBP2Q9H3C7 697 aa17.79■□□□□ 0.44
GSE1-212ENST00000562659 SHPRHQ149N8 1683 aa17.77■□□□□ 0.44
GSE1-212ENST00000562659 NUTM2GQ5VZR2 741 aa17.77■□□□□ 0.44
GSE1-212ENST00000562659 ZRANB1Q9UGI0 708 aa17.77■□□□□ 0.44
GSE1-212ENST00000562659 SLIT3O75094 1523 aa17.77■□□□□ 0.43
GSE1-212ENST00000562659 PIK3C2AO00443 1686 aa17.77■□□□□ 0.43
GSE1-212ENST00000562659 USP54Q70EL1 1684 aa17.77■□□□□ 0.43
GSE1-212ENST00000562659 CPDO75976 1380 aa17.76■□□□□ 0.43
GSE1-212ENST00000562659 AATKQ6ZMQ8 1374 aa17.76■□□□□ 0.43
GSE1-212ENST00000562659 MORC1Q86VD1 984 aa17.74■□□□□ 0.43
GSE1-212ENST00000562659 CABLES1Q8TDN4 633 aa17.74■□□□□ 0.43
GSE1-212ENST00000562659 HAP1P54257 671 aaPredicted RBP17.73■□□□□ 0.43
GSE1-212ENST00000562659 KIF24Q5T7B8 1368 aa17.72■□□□□ 0.43
GSE1-212ENST00000562659 ARHGEF25Q86VW2 580 aa17.72■□□□□ 0.43
GSE1-212ENST00000562659 RALBP1Q15311 655 aa17.71■□□□□ 0.43
GSE1-212ENST00000562659 CC2D1BQ5T0F9 858 aaKnown RBP17.71■□□□□ 0.43
GSE1-212ENST00000562659 NFAT5O94916 1531 aa17.7■□□□□ 0.42
GSE1-212ENST00000562659 PARD3Q8TEW0 1356 aa17.69■□□□□ 0.42
GSE1-212ENST00000562659 NUTM2BA6NNL0 878 aaPredicted RBP17.69■□□□□ 0.42
GSE1-212ENST00000562659 NUTM2EB1AL46 878 aaPredicted RBP17.69■□□□□ 0.42
GSE1-212ENST00000562659 NUTM2AQ8IVF1 878 aaPredicted RBP17.69■□□□□ 0.42
GSE1-212ENST00000562659 PRDM11Q9NQV5 511 aa17.68■□□□□ 0.42
GSE1-212ENST00000562659 KIAA0232Q92628 1395 aa17.67■□□□□ 0.42
GSE1-212ENST00000562659 CRYBG1Q9Y4K1 1723 aa17.67■□□□□ 0.42
GSE1-212ENST00000562659 FAM83GA6ND36 823 aa17.67■□□□□ 0.42
GSE1-212ENST00000562659 ZC3H6P61129 1189 aaKnown RBP17.67■□□□□ 0.42
GSE1-212ENST00000562659 ABCC6O95255 1503 aa17.67■□□□□ 0.42
GSE1-212ENST00000562659 RTL1A6NKG5 1358 aa17.66■□□□□ 0.42
GSE1-212ENST00000562659 LRP6O75581 1613 aa17.66■□□□□ 0.42
GSE1-212ENST00000562659 KIF20BQ96Q89 1820 aa17.66■□□□□ 0.42
GSE1-212ENST00000562659 ADAMTS2O95450 1211 aa17.66■□□□□ 0.42
GSE1-212ENST00000562659 FNBP4Q8N3X1 1017 aaPredicted RBP17.66■□□□□ 0.42
GSE1-212ENST00000562659 POLKQ9UBT6 870 aa17.66■□□□□ 0.42
GSE1-212ENST00000562659 MARF1Q9Y4F3 1742 aaKnown RBP17.66■□□□□ 0.42
GSE1-212ENST00000562659 MAP3K19Q56UN5 1328 aa17.66■□□□□ 0.42
GSE1-212ENST00000562659 SMG6Q86US8 1419 aaKnown RBP17.65■□□□□ 0.42
GSE1-212ENST00000562659 IP6K1Q92551 441 aa17.65■□□□□ 0.42
GSE1-212ENST00000562659 PRKRIP1Q9H875 184 aaPredicted RBP17.65■□□□□ 0.42
GSE1-212ENST00000562659 PHRF1Q9P1Y6 1649 aaKnown RBP17.65■□□□□ 0.42
GSE1-212ENST00000562659 SOX12O15370 315 aa17.63■□□□□ 0.41
GSE1-212ENST00000562659 PLEKHG5O94827 1062 aa17.63■□□□□ 0.41
GSE1-212ENST00000562659 MEX3CQ5U5Q3 659 aaKnown RBP17.63■□□□□ 0.41
GSE1-212ENST00000562659 ANKRD26Q9UPS8 1709 aa17.63■□□□□ 0.41
GSE1-212ENST00000562659 INSRP06213 1382 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms