RNA–Protein interactions for RNA: ENST00000562237.5

UTP4-203, Transcript of UTP4, small subunit processome component, humanhuman

TSL 1 (best)

Gene UTP4, Length 2,186 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UTP4-203ENST00000562237 RAPGEF3O95398 923 aa25.05■■□□□ 1.6
UTP4-203ENST00000562237 EXOSC9Q06265 439 aaKnown RBP25.05■■□□□ 1.6
UTP4-203ENST00000562237 FTSJ3Q8IY81 847 aaKnown RBP25.05■■□□□ 1.6
UTP4-203ENST00000562237 HDAC1Q13547 482 aaPredicted RBP25.05■■□□□ 1.6
UTP4-203ENST00000562237 ANTXR1Q9H6X2 564 aa25.05■■□□□ 1.6
UTP4-203ENST00000562237 FYB1O15117 783 aa25.04■■□□□ 1.6
UTP4-203ENST00000562237 SRPK2P78362 688 aaKnown RBP25.04■■□□□ 1.6
UTP4-203ENST00000562237 GGNBP2Q9H3C7 697 aa25.04■■□□□ 1.6
UTP4-203ENST00000562237 PNPLA6Q8IY17 1366 aa25.03■■□□□ 1.6
UTP4-203ENST00000562237 TRIM27P14373 513 aa25.03■■□□□ 1.6
UTP4-203ENST00000562237 SAFB2Q14151 953 aaKnown RBP eCLIP25.03■■□□□ 1.6
UTP4-203ENST00000562237 SMC4Q9NTJ3 1288 aa25.03■■□□□ 1.6
UTP4-203ENST00000562237 TERF2IPQ9NYB0 399 aa25.03■■□□□ 1.6
UTP4-203ENST00000562237 BRPF3Q9ULD4 1205 aa25.03■■□□□ 1.6
UTP4-203ENST00000562237 U2SURPO15042 1029 aaKnown RBP25.02■■□□□ 1.6
UTP4-203ENST00000562237 SSH1Q8WYL5 1049 aa25.02■■□□□ 1.6
UTP4-203ENST00000562237 DDX19BQ9UMR2 479 aa25.02■■□□□ 1.6
UTP4-203ENST00000562237 CDC42BPGQ6DT37 1551 aa25.01■■□□□ 1.59
UTP4-203ENST00000562237 YTHDC2Q9H6S0 1430 aaKnown RBP25.01■■□□□ 1.59
UTP4-203ENST00000562237 ATF7IPQ6VMQ6 1270 aa25.01■■□□□ 1.59
UTP4-203ENST00000562237 KIF20BQ96Q89 1820 aa25■■□□□ 1.59
UTP4-203ENST00000562237 STK26Q9P289 416 aa25■■□□□ 1.59
UTP4-203ENST00000562237 TBC1D2Q9BYX2 928 aa24.98■■□□□ 1.59
UTP4-203ENST00000562237 PNNQ9H307 717 aaKnown RBP24.97■■□□□ 1.59
UTP4-203ENST00000562237 SMC5Q8IY18 1101 aa24.97■■□□□ 1.59
UTP4-203ENST00000562237 OSCARQ8IYS5 282 aa24.96■■□□□ 1.59
UTP4-203ENST00000562237 PRAM1Q96QH2 718 aa24.96■■□□□ 1.59
UTP4-203ENST00000562237 RTN4Q9NQC3 1192 aaKnown RBP24.96■■□□□ 1.59
UTP4-203ENST00000562237 ARHGEF40Q8TER5 1519 aa24.96■■□□□ 1.59
UTP4-203ENST00000562237 MINK1Q8N4C8 1332 aaPredicted RBP24.96■■□□□ 1.59
UTP4-203ENST00000562237 DIAPH1O60610 1272 aaKnown RBP24.95■■□□□ 1.59
UTP4-203ENST00000562237 SLKQ9H2G2 1235 aaPredicted RBP24.95■■□□□ 1.59
UTP4-203ENST00000562237 RIPK4P57078 832 aa24.95■■□□□ 1.58
UTP4-203ENST00000562237 ALKQ9UM73 1620 aa24.95■■□□□ 1.58
UTP4-203ENST00000562237 NOB1Q9ULX3 412 aaKnown RBP24.94■■□□□ 1.58
UTP4-203ENST00000562237 KIF16BQ96L93 1317 aa24.94■■□□□ 1.58
UTP4-203ENST00000562237 ITPRIPQ8IWB1 547 aa24.94■■□□□ 1.58
UTP4-203ENST00000562237 YEATS2Q9ULM3 1422 aa24.93■■□□□ 1.58
UTP4-203ENST00000562237 ZBTB40Q9NUA8 1239 aa24.93■■□□□ 1.58
UTP4-203ENST00000562237 HDGFL2Q7Z4V5 671 aaPredicted RBP24.93■■□□□ 1.58
UTP4-203ENST00000562237 ALDH1L2Q3SY69 923 aa24.92■■□□□ 1.58
UTP4-203ENST00000562237 POGKQ9P215 609 aa24.92■■□□□ 1.58
UTP4-203ENST00000562237 LRRC7Q96NW7 1537 aa24.91■■□□□ 1.58
UTP4-203ENST00000562237 IPO8O15397 1037 aaKnown RBP24.91■■□□□ 1.58
UTP4-203ENST00000562237 FCHSD2O94868 740 aa24.91■■□□□ 1.58
UTP4-203ENST00000562237 TMEM57Q8N5G2 664 aa24.91■■□□□ 1.58
UTP4-203ENST00000562237 BRPF1P55201 1214 aaPredicted RBP24.9■■□□□ 1.58
UTP4-203ENST00000562237 PPIP5K1Q6PFW1 1433 aa24.9■■□□□ 1.58
UTP4-203ENST00000562237 C22orf23Q9BZE7 217 aa24.9■■□□□ 1.58
UTP4-203ENST00000562237 FAM135BQ49AJ0 1406 aa24.89■■□□□ 1.57
UTP4-203ENST00000562237 ZNF428Q96B54 188 aa24.88■■□□□ 1.57
UTP4-203ENST00000562237 CDK19Q9BWU1 502 aa24.88■■□□□ 1.57
UTP4-203ENST00000562237 DLC1Q96QB1 1528 aa24.87■■□□□ 1.57
UTP4-203ENST00000562237 ATP7BP35670 1465 aa24.86■■□□□ 1.57
UTP4-203ENST00000562237 CABP1Q9NZU7 370 aa24.86■■□□□ 1.57
UTP4-203ENST00000562237 RSPH6AQ9H0K4 717 aa24.85■■□□□ 1.57
UTP4-203ENST00000562237 NUCB1Q02818 461 aa24.84■■□□□ 1.57
UTP4-203ENST00000562237 MFAP1P55081 439 aaKnown RBP24.83■■□□□ 1.57
UTP4-203ENST00000562237 MAP2P11137 1827 aaKnown RBP24.83■■□□□ 1.56
UTP4-203ENST00000562237 POLKQ9UBT6 870 aa24.82■■□□□ 1.56
UTP4-203ENST00000562237 SETD1AO15047 1707 aaKnown RBP24.81■■□□□ 1.56
UTP4-203ENST00000562237 SENP3Q9H4L4 574 aaPredicted RBP24.81■■□□□ 1.56
UTP4-203ENST00000562237 PRKAR2BP31323 418 aa24.8■■□□□ 1.56
UTP4-203ENST00000562237 PIK3R4Q99570 1358 aa24.8■■□□□ 1.56
UTP4-203ENST00000562237 FBXO31Q5XUX0 539 aaPredicted RBP24.79■■□□□ 1.56
UTP4-203ENST00000562237 ARHGAP45Q92619 1136 aa24.78■■□□□ 1.56
UTP4-203ENST00000562237 CHMP5Q9NZZ3 219 aa24.78■■□□□ 1.56
UTP4-203ENST00000562237 RBM25P49756 843 aaKnown RBP24.78■■□□□ 1.56
UTP4-203ENST00000562237 NFE2L2Q16236 605 aa24.78■■□□□ 1.56
UTP4-203ENST00000562237 PTCH1Q13635 1447 aa24.78■■□□□ 1.56
UTP4-203ENST00000562237 RIMBP3CA6NJZ7 1639 aa24.77■■□□□ 1.56
UTP4-203ENST00000562237 RIMBP3BA6NNM3 1639 aa24.77■■□□□ 1.56
UTP4-203ENST00000562237 RIMBP3Q9UFD9 1639 aa24.77■■□□□ 1.56
UTP4-203ENST00000562237 MCM4P33991 863 aa24.77■■□□□ 1.56
UTP4-203ENST00000562237 NCOA3Q9Y6Q9 1424 aa24.76■■□□□ 1.55
UTP4-203ENST00000562237 CALD1Q05682 793 aaKnown RBP24.76■■□□□ 1.55
UTP4-203ENST00000562237 L1TD1Q5T7N2 865 aaKnown RBP24.76■■□□□ 1.55
UTP4-203ENST00000562237 CHD1LQ86WJ1 897 aa24.76■■□□□ 1.55
UTP4-203ENST00000562237 VAMP4O75379 141 aa24.76■■□□□ 1.55
UTP4-203ENST00000562237 CHMP4BQ9H444 224 aaKnown RBP24.76■■□□□ 1.55
UTP4-203ENST00000562237 ZBTB7BO15156 539 aaPredicted RBP24.75■■□□□ 1.55
UTP4-203ENST00000562237 FAM43AQ8N2R8 423 aa24.75■■□□□ 1.55
UTP4-203ENST00000562237 MRPL50Q8N5N7 158 aaKnown RBP24.74■■□□□ 1.55
UTP4-203ENST00000562237 ANO8Q9HCE9 1232 aaPredicted RBP24.74■■□□□ 1.55
UTP4-203ENST00000562237 CPSF1Q10570 1443 aaKnown RBP24.74■■□□□ 1.55
UTP4-203ENST00000562237 REREQ9P2R6 1566 aa24.74■■□□□ 1.55
UTP4-203ENST00000562237 CDK12Q9NYV4 1490 aaPredicted RBP24.74■■□□□ 1.55
UTP4-203ENST00000562237 PHACTR3Q96KR7 559 aa24.74■■□□□ 1.55
UTP4-203ENST00000562237 A2ML1A8K2U0 1454 aa24.73■■□□□ 1.55
UTP4-203ENST00000562237 BMP2KLQ5H9B9 411 aa24.73■■□□□ 1.55
UTP4-203ENST00000562237 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.73■■□□□ 1.558e-7■■■■□ 19.9
UTP4-203ENST00000562237 SNX21Q969T3 373 aa24.73■■□□□ 1.55
UTP4-203ENST00000562237 IFT57Q9NWB7 429 aa24.73■■□□□ 1.55
UTP4-203ENST00000562237 ZNF853P0CG23 659 aa24.73■■□□□ 1.55
UTP4-203ENST00000562237 LNPKQ9C0E8 428 aa24.73■■□□□ 1.55
UTP4-203ENST00000562237 EDC4Q6P2E9 1401 aaKnown RBP24.73■■□□□ 1.55
UTP4-203ENST00000562237 HSCBQ8IWL3 235 aa24.72■■□□□ 1.55
UTP4-203ENST00000562237 GCC1Q96CN9 775 aa24.72■■□□□ 1.55
UTP4-203ENST00000562237 ZNF692Q9BU19 519 aaPredicted RBP24.72■■□□□ 1.55
UTP4-203ENST00000562237 GNAI1P63096 354 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms