RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 NKTRP30414 1462 aaKnown RBP16.62■□□□□ 0.25
AC055717.2-201ENST00000561864 E9PSI1 815 aa16.62■□□□□ 0.25
AC055717.2-201ENST00000561864 CCDC61Q9Y6R9 512 aa16.62■□□□□ 0.25
AC055717.2-201ENST00000561864 PNPLA6Q8IY17 1366 aa16.62■□□□□ 0.25
AC055717.2-201ENST00000561864 PIK3R4Q99570 1358 aa16.62■□□□□ 0.25
AC055717.2-201ENST00000561864 CCDC27Q2M243 656 aa16.6■□□□□ 0.25
AC055717.2-201ENST00000561864 B4GALNT3Q6L9W6 998 aa16.59■□□□□ 0.25
AC055717.2-201ENST00000561864 PHF23Q9BUL5 403 aaPredicted RBP16.59■□□□□ 0.25
AC055717.2-201ENST00000561864 ZNF692Q9BU19 519 aaPredicted RBP16.58■□□□□ 0.24
AC055717.2-201ENST00000561864 AATKQ6ZMQ8 1374 aa16.58■□□□□ 0.24
AC055717.2-201ENST00000561864 CDK12Q9NYV4 1490 aaPredicted RBP16.58■□□□□ 0.24
AC055717.2-201ENST00000561864 PRR36Q9H6K5 1346 aa16.57■□□□□ 0.24
AC055717.2-201ENST00000561864 SLC26A8Q96RN1 970 aa16.57■□□□□ 0.24
AC055717.2-201ENST00000561864 U2AF1L5P0DN76 240 aaPredicted RBP16.56■□□□□ 0.24
AC055717.2-201ENST00000561864 U2AF1Q01081 240 aaKnown RBP eCLIP16.56■□□□□ 0.24
AC055717.2-201ENST00000561864 WDR63Q8IWG1 891 aa16.56■□□□□ 0.24
AC055717.2-201ENST00000561864 WWC1Q8IX03 1113 aa16.56■□□□□ 0.24
AC055717.2-201ENST00000561864 TCP11L2Q8N4U5 519 aa16.56■□□□□ 0.24
AC055717.2-201ENST00000561864 CCDC136Q96JN2 1154 aa16.56■□□□□ 0.24
AC055717.2-201ENST00000561864 PNNQ9H307 717 aaKnown RBP16.56■□□□□ 0.24
AC055717.2-201ENST00000561864 AMOTL2Q9Y2J4 779 aa16.56■□□□□ 0.24
AC055717.2-201ENST00000561864 PLEKHG3A1L390 1219 aa16.55■□□□□ 0.24
AC055717.2-201ENST00000561864 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.55■□□□□ 0.24
AC055717.2-201ENST00000561864 NALCNQ8IZF0 1738 aa16.54■□□□□ 0.24
AC055717.2-201ENST00000561864 DIAPH1O60610 1272 aaKnown RBP16.54■□□□□ 0.24
AC055717.2-201ENST00000561864 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.54■□□□□ 0.24
AC055717.2-201ENST00000561864 ANKARQ7Z5J8 1434 aa16.53■□□□□ 0.24
AC055717.2-201ENST00000561864 FMN2Q9NZ56 1722 aa16.53■□□□□ 0.24
AC055717.2-201ENST00000561864 USP6P35125 1406 aa16.53■□□□□ 0.24
AC055717.2-201ENST00000561864 LRRC7Q96NW7 1537 aa16.52■□□□□ 0.24
AC055717.2-201ENST00000561864 U2SURPO15042 1029 aaKnown RBP16.51■□□□□ 0.23
AC055717.2-201ENST00000561864 NME9Q86XW9 330 aa16.51■□□□□ 0.23
AC055717.2-201ENST00000561864 EXOC6Q8TAG9 804 aa16.51■□□□□ 0.23
AC055717.2-201ENST00000561864 COG3Q96JB2 828 aa16.51■□□□□ 0.23
AC055717.2-201ENST00000561864 SPINK5Q9NQ38 1064 aaPredicted RBP16.51■□□□□ 0.23
AC055717.2-201ENST00000561864 POLKQ9UBT6 870 aa16.51■□□□□ 0.23
AC055717.2-201ENST00000561864 MAP2P11137 1827 aaKnown RBP16.51■□□□□ 0.23
AC055717.2-201ENST00000561864 OVOS2A0A0J9YW53 1432 aa16.51■□□□□ 0.23
AC055717.2-201ENST00000561864 OVOS2Q6IE36 1432 aa16.51■□□□□ 0.23
AC055717.2-201ENST00000561864 MAPK8IP3Q9UPT6 1336 aa16.5■□□□□ 0.23
AC055717.2-201ENST00000561864 CHD2O14647 1828 aaKnown RBP16.5■□□□□ 0.23
AC055717.2-201ENST00000561864 LMTK3Q96Q04 1460 aa16.5■□□□□ 0.23
AC055717.2-201ENST00000561864 HSPA2P54652 639 aa16.5■□□□□ 0.23
AC055717.2-201ENST00000561864 PLEKHF1Q96S99 279 aa16.5■□□□□ 0.23
AC055717.2-201ENST00000561864 SSH2Q76I76 1423 aa16.49■□□□□ 0.23
AC055717.2-201ENST00000561864 DMRT2Q9Y5R5 561 aa16.49■□□□□ 0.23
AC055717.2-201ENST00000561864 ACEP12821 1306 aa16.48■□□□□ 0.23
AC055717.2-201ENST00000561864 TTC21BQ7Z4L5 1316 aa16.48■□□□□ 0.23
AC055717.2-201ENST00000561864 NCKAP5LQ9HCH0 1330 aa16.48■□□□□ 0.23
AC055717.2-201ENST00000561864 ANKLE2Q86XL3 938 aa16.48■□□□□ 0.23
AC055717.2-201ENST00000561864 MYH16Q9H6N6 1097 aa16.48■□□□□ 0.23
AC055717.2-201ENST00000561864 RRP7AQ9Y3A4 280 aaKnown RBP16.48■□□□□ 0.23
AC055717.2-201ENST00000561864 SETD1BQ9UPS6 1966 aaKnown RBP16.47■□□□□ 0.23
AC055717.2-201ENST00000561864 TTC21AQ8NDW8 1320 aa16.47■□□□□ 0.23
AC055717.2-201ENST00000561864 USP54Q70EL1 1684 aa16.47■□□□□ 0.23
AC055717.2-201ENST00000561864 FCHSD2O94868 740 aa16.47■□□□□ 0.23
AC055717.2-201ENST00000561864 IL16Q14005 1332 aa16.46■□□□□ 0.23
AC055717.2-201ENST00000561864 CRBNQ96SW2 442 aa16.46■□□□□ 0.23
AC055717.2-201ENST00000561864 PLIN1O60240 522 aa16.45■□□□□ 0.22
AC055717.2-201ENST00000561864 TMPOP42166 694 aaKnown RBP16.45■□□□□ 0.22
AC055717.2-201ENST00000561864 USP31Q70CQ4 1352 aa16.45■□□□□ 0.22
AC055717.2-201ENST00000561864 NWD1Q149M9 1564 aa16.44■□□□□ 0.22
AC055717.2-201ENST00000561864 CT47B1P0C2W7 299 aaPredicted RBP16.44■□□□□ 0.22
AC055717.2-201ENST00000561864 NEUROD2Q15784 382 aa16.44■□□□□ 0.22
AC055717.2-201ENST00000561864 NEFMP07197 916 aa16.43■□□□□ 0.22
AC055717.2-201ENST00000561864 KCNA6P17658 529 aa16.43■□□□□ 0.22
AC055717.2-201ENST00000561864 RSPH6AQ9H0K4 717 aa16.43■□□□□ 0.22
AC055717.2-201ENST00000561864 RGPD8O14715 1765 aaPredicted RBP16.43■□□□□ 0.22
AC055717.2-201ENST00000561864 NPHP4O75161 1426 aaPredicted RBP16.43■□□□□ 0.22
AC055717.2-201ENST00000561864 IL13P35225 146 aa16.42■□□□□ 0.22
AC055717.2-201ENST00000561864 ZRANB1Q9UGI0 708 aa16.42■□□□□ 0.22
AC055717.2-201ENST00000561864 EMILIN1Q9Y6C2 1016 aa16.42■□□□□ 0.22
AC055717.2-201ENST00000561864 PIK3C2AO00443 1686 aa16.41■□□□□ 0.22
AC055717.2-201ENST00000561864 PPM1GO15355 546 aaPredicted RBP16.41■□□□□ 0.22
AC055717.2-201ENST00000561864 RGPD1P0DJD0 1748 aa16.4■□□□□ 0.22
AC055717.2-201ENST00000561864 ADGRL3Q9HAR2 1447 aa16.4■□□□□ 0.22
AC055717.2-201ENST00000561864 PDE3AQ14432 1141 aa16.4■□□□□ 0.22
AC055717.2-201ENST00000561864 C20orf194Q5TEA3 1177 aa16.4■□□□□ 0.22
AC055717.2-201ENST00000561864 TRIM35Q9UPQ4 493 aa16.4■□□□□ 0.22
AC055717.2-201ENST00000561864 PEAK1Q9H792 1746 aa16.39■□□□□ 0.21
AC055717.2-201ENST00000561864 PRKAR2BP31323 418 aa16.39■□□□□ 0.21
AC055717.2-201ENST00000561864 RBM19Q9Y4C8 960 aaKnown RBP16.39■□□□□ 0.21
AC055717.2-201ENST00000561864 RIPK4P57078 832 aa16.38■□□□□ 0.21
AC055717.2-201ENST00000561864 NFE2L2Q16236 605 aa16.38■□□□□ 0.21
AC055717.2-201ENST00000561864 FANCIQ9NVI1 1328 aa16.38■□□□□ 0.21
AC055717.2-201ENST00000561864 NUTM2FA1L443 756 aa16.37■□□□□ 0.21
AC055717.2-201ENST00000561864 BCAR3O75815 825 aa16.37■□□□□ 0.21
AC055717.2-201ENST00000561864 RARSP54136 660 aaKnown RBP16.37■□□□□ 0.21
AC055717.2-201ENST00000561864 CALD1Q05682 793 aaKnown RBP16.37■□□□□ 0.21
AC055717.2-201ENST00000561864 NGDNQ8NEJ9 315 aaKnown RBP16.37■□□□□ 0.21
AC055717.2-201ENST00000561864 MARF1Q9Y4F3 1742 aaKnown RBP16.36■□□□□ 0.21
AC055717.2-201ENST00000561864 FBLN1P23142 703 aa16.36■□□□□ 0.21
AC055717.2-201ENST00000561864 RRS1Q15050 365 aaKnown RBP16.36■□□□□ 0.21
AC055717.2-201ENST00000561864 CANXP27824 592 aaKnown RBP16.35■□□□□ 0.21
AC055717.2-201ENST00000561864 LMOD3Q0VAK6 560 aa16.35■□□□□ 0.21
AC055717.2-201ENST00000561864 KIF24Q5T7B8 1368 aa16.35■□□□□ 0.21
AC055717.2-201ENST00000561864 AAMPQ13685 434 aa16.34■□□□□ 0.21
AC055717.2-201ENST00000561864 PMFBP1Q8TBY8 1022 aa16.34■□□□□ 0.21
AC055717.2-201ENST00000561864 SBNO1A3KN83 1393 aa16.34■□□□□ 0.21
AC055717.2-201ENST00000561864 TCERG1O14776 1098 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms