RNA–Protein interactions for RNA: ENST00000561588.2

AP005233.2-201, humanhuman

TSL 3 BASIC

Gene AP005233.2, Length 372 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP005233.2-201ENST00000561588 KRT27Q7Z3Y8 459 aa24.72■■□□□ 1.55
AP005233.2-201ENST00000561588 ATP7BP35670 1465 aa24.71■■□□□ 1.55
AP005233.2-201ENST00000561588 BTG4Q9NY30 223 aa24.71■■□□□ 1.55
AP005233.2-201ENST00000561588 NGDNQ8NEJ9 315 aaKnown RBP24.7■■□□□ 1.54
AP005233.2-201ENST00000561588 SF3B2Q13435 895 aaKnown RBP24.68■■□□□ 1.54
AP005233.2-201ENST00000561588 KIAA1210Q9ULL0 1709 aa24.67■■□□□ 1.54
AP005233.2-201ENST00000561588 DEFB132Q7Z7B7 95 aa24.67■■□□□ 1.54
AP005233.2-201ENST00000561588 NUDT16Q96DE0 195 aaKnown RBP24.66■■□□□ 1.54
AP005233.2-201ENST00000561588 FAM98CQ17RN3 349 aaKnown RBP24.65■■□□□ 1.54
AP005233.2-201ENST00000561588 SPATA31A5Q5VU36 1347 aa24.64■■□□□ 1.54
AP005233.2-201ENST00000561588 SPATA31A7Q8IWB4 1347 aa24.64■■□□□ 1.54
AP005233.2-201ENST00000561588 PAK3O75914 559 aaPredicted RBP24.64■■□□□ 1.54
AP005233.2-201ENST00000561588 TOPAZ1Q8N9V7 1692 aa24.64■■□□□ 1.53
AP005233.2-201ENST00000561588 POLR3AO14802 1390 aaPredicted RBP24.63■■□□□ 1.53
AP005233.2-201ENST00000561588 CDK19Q9BWU1 502 aa24.62■■□□□ 1.53
AP005233.2-201ENST00000561588 THSD7AQ9UPZ6 1657 aa24.62■■□□□ 1.53
AP005233.2-201ENST00000561588 PRDM11Q9NQV5 511 aa24.61■■□□□ 1.53
AP005233.2-201ENST00000561588 PHRF1Q9P1Y6 1649 aaKnown RBP24.61■■□□□ 1.53
AP005233.2-201ENST00000561588 A0A0G2JS52 829 aa24.6■■□□□ 1.53
AP005233.2-201ENST00000561588 MYT1Q01538 1121 aa24.6■■□□□ 1.53
AP005233.2-201ENST00000561588 CCDC61Q9Y6R9 512 aa24.59■■□□□ 1.53
AP005233.2-201ENST00000561588 KIAA0232Q92628 1395 aa24.58■■□□□ 1.53
AP005233.2-201ENST00000561588 PLEKHG3A1L390 1219 aa24.58■■□□□ 1.53
AP005233.2-201ENST00000561588 BAG6P46379 1132 aa24.57■■□□□ 1.52
AP005233.2-201ENST00000561588 ACEP12821 1306 aa24.57■■□□□ 1.52
AP005233.2-201ENST00000561588 RGPD1P0DJD0 1748 aa24.56■■□□□ 1.52
AP005233.2-201ENST00000561588 NBPF8Q3BBV2 869 aa24.56■■□□□ 1.52
AP005233.2-201ENST00000561588 SPATA31A1Q5TZJ5 1347 aa24.55■■□□□ 1.52
AP005233.2-201ENST00000561588 NBPF1Q3BBV0 1214 aa24.54■■□□□ 1.52
AP005233.2-201ENST00000561588 LRP5O75197 1615 aa24.53■■□□□ 1.52
AP005233.2-201ENST00000561588 DISP2A7MBM2 1401 aa24.52■■□□□ 1.52
AP005233.2-201ENST00000561588 NRKQ7Z2Y5 1582 aa24.51■■□□□ 1.51
AP005233.2-201ENST00000561588 CHRNA2Q15822 529 aa24.51■■□□□ 1.51
AP005233.2-201ENST00000561588 ZC3H6P61129 1189 aaKnown RBP24.5■■□□□ 1.51
AP005233.2-201ENST00000561588 USP19O94966 1318 aa24.5■■□□□ 1.51
AP005233.2-201ENST00000561588 TNS1Q9HBL0 1735 aaKnown RBP24.49■■□□□ 1.51
AP005233.2-201ENST00000561588 FAM182BQ5T319 152 aa24.49■■□□□ 1.51
AP005233.2-201ENST00000561588 NUTM2GQ5VZR2 741 aa24.49■■□□□ 1.51
AP005233.2-201ENST00000561588 CPDO75976 1380 aa24.49■■□□□ 1.51
AP005233.2-201ENST00000561588 CENPJQ9HC77 1338 aaPredicted RBP24.48■■□□□ 1.51
AP005233.2-201ENST00000561588 LMO7Q8WWI1 1683 aa24.47■■□□□ 1.51
AP005233.2-201ENST00000561588 SSH2Q76I76 1423 aa24.47■■□□□ 1.51
AP005233.2-201ENST00000561588 BRD4O60885 1362 aaPredicted RBP24.47■■□□□ 1.51
AP005233.2-201ENST00000561588 ABTB2Q8N961 1025 aa24.47■■□□□ 1.51
AP005233.2-201ENST00000561588 STRN4Q9NRL3 753 aa24.47■■□□□ 1.51
AP005233.2-201ENST00000561588 PPIP5K1Q6PFW1 1433 aa24.46■■□□□ 1.51
AP005233.2-201ENST00000561588 EN1Q05925 392 aaPredicted RBP24.46■■□□□ 1.51
AP005233.2-201ENST00000561588 BARGINQ6ZT62 677 aa24.46■■□□□ 1.51
AP005233.2-201ENST00000561588 CAMTA1Q9Y6Y1 1673 aa24.46■■□□□ 1.51
AP005233.2-201ENST00000561588 SRPK2P78362 688 aaKnown RBP24.44■■□□□ 1.5
AP005233.2-201ENST00000561588 FAM196AQ6ZSG2 479 aa24.44■■□□□ 1.5
AP005233.2-201ENST00000561588 QRICH2Q9H0J4 1663 aa24.43■■□□□ 1.5
AP005233.2-201ENST00000561588 NLRP13Q86W25 1043 aa24.43■■□□□ 1.5
AP005233.2-201ENST00000561588 PSDA5PKW4 1024 aaPredicted RBP24.42■■□□□ 1.5
AP005233.2-201ENST00000561588 EVA1CP58658 441 aa24.42■■□□□ 1.5
AP005233.2-201ENST00000561588 GCP02774 474 aa24.41■■□□□ 1.5
AP005233.2-201ENST00000561588 CABP2Q9NPB3 220 aa24.41■■□□□ 1.5
AP005233.2-201ENST00000561588 LARP1Q6PKG0 1096 aaKnown RBP24.4■■□□□ 1.5
AP005233.2-201ENST00000561588 TCP11L2Q8N4U5 519 aa24.39■■□□□ 1.49
AP005233.2-201ENST00000561588 CAMKK2Q96RR4 588 aa24.39■■□□□ 1.49
AP005233.2-201ENST00000561588 USP35Q9P2H5 1018 aa24.39■■□□□ 1.49
AP005233.2-201ENST00000561588 THRAP3Q9Y2W1 955 aaKnown RBP24.39■■□□□ 1.49
AP005233.2-201ENST00000561588 USP6P35125 1406 aa24.38■■□□□ 1.49
AP005233.2-201ENST00000561588 EZH2Q15910 746 aaKnown RBP24.38■■□□□ 1.49
AP005233.2-201ENST00000561588 PARD3Q8TEW0 1356 aa24.38■■□□□ 1.49
AP005233.2-201ENST00000561588 TRIM37O94972 964 aa24.37■■□□□ 1.49
AP005233.2-201ENST00000561588 L3MBTL2Q969R5 705 aa24.37■■□□□ 1.49
AP005233.2-201ENST00000561588 COL5A2P05997 1499 aaPredicted RBP24.37■■□□□ 1.49
AP005233.2-201ENST00000561588 CABP1Q9NZU7 370 aa24.36■■□□□ 1.49
AP005233.2-201ENST00000561588 SLIT3O75094 1523 aa24.35■■□□□ 1.49
AP005233.2-201ENST00000561588 PDE3BQ13370 1112 aa24.35■■□□□ 1.49
AP005233.2-201ENST00000561588 PARP4Q9UKK3 1724 aaKnown RBP24.35■■□□□ 1.49
AP005233.2-201ENST00000561588 TRPM1Q7Z4N2 1603 aa24.35■■□□□ 1.49
AP005233.2-201ENST00000561588 R3HDM1Q15032 1099 aaKnown RBP24.33■■□□□ 1.49
AP005233.2-201ENST00000561588 AATKQ6ZMQ8 1374 aa24.32■■□□□ 1.48
AP005233.2-201ENST00000561588 RREB1Q92766 1687 aa24.32■■□□□ 1.48
AP005233.2-201ENST00000561588 APBA3O96018 575 aa24.32■■□□□ 1.48
AP005233.2-201ENST00000561588 CRB1P82279 1406 aa24.32■■□□□ 1.48
AP005233.2-201ENST00000561588 EVC2Q86UK5 1308 aa24.32■■□□□ 1.48
AP005233.2-201ENST00000561588 NLRP6P59044 892 aa24.31■■□□□ 1.48
AP005233.2-201ENST00000561588 PIK3C2AO00443 1686 aa24.3■■□□□ 1.48
AP005233.2-201ENST00000561588 C11orf95C9JLR9 678 aaPredicted RBP24.29■■□□□ 1.48
AP005233.2-201ENST00000561588 COL18A1P39060 1754 aa24.29■■□□□ 1.48
AP005233.2-201ENST00000561588 NUP188Q5SRE5 1749 aa24.27■■□□□ 1.48
AP005233.2-201ENST00000561588 SIN3AQ96ST3 1273 aa24.26■■□□□ 1.47
AP005233.2-201ENST00000561588 ZNF692Q9BU19 519 aaPredicted RBP24.26■■□□□ 1.47
AP005233.2-201ENST00000561588 PEAK1Q9H792 1746 aa24.26■■□□□ 1.47
AP005233.2-201ENST00000561588 ROCK2O75116 1388 aaKnown RBP24.26■■□□□ 1.47
AP005233.2-201ENST00000561588 AKAP12Q02952 1782 aa24.26■■□□□ 1.47
AP005233.2-201ENST00000561588 OVOS2A0A0G2JMS6 1433 aa24.23■■□□□ 1.47
AP005233.2-201ENST00000561588 OVOS2A0A0J9YW53 1432 aa24.23■■□□□ 1.47
AP005233.2-201ENST00000561588 OVOS2Q6IE36 1432 aa24.23■■□□□ 1.47
AP005233.2-201ENST00000561588 LRRC37A3O60309 1634 aa24.23■■□□□ 1.47
AP005233.2-201ENST00000561588 CPSF1Q10570 1443 aaKnown RBP24.22■■□□□ 1.47
AP005233.2-201ENST00000561588 TTC21BQ7Z4L5 1316 aa24.22■■□□□ 1.47
AP005233.2-201ENST00000561588 WDR17Q8IZU2 1322 aa24.21■■□□□ 1.47
AP005233.2-201ENST00000561588 TTC21AQ8NDW8 1320 aa24.21■■□□□ 1.47
AP005233.2-201ENST00000561588 ARHGEF25Q86VW2 580 aa24.21■■□□□ 1.47
AP005233.2-201ENST00000561588 KCNH5Q8NCM2 988 aa24.21■■□□□ 1.47
AP005233.2-201ENST00000561588 AXIN2Q9Y2T1 843 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 767 ms