RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.88■■□□□ 1.09
RABGGTA-219ENST00000560871 BCL9LQ86UU0 1499 aa21.88■■□□□ 1.09
RABGGTA-219ENST00000560871 ATRNO75882 1429 aa21.88■■□□□ 1.09
RABGGTA-219ENST00000560871 ARHGEF10O15013 1369 aa21.87■■□□□ 1.09
RABGGTA-219ENST00000560871 ATAD2Q6PL18 1390 aa21.87■■□□□ 1.09
RABGGTA-219ENST00000560871 TRPC5Q9UL62 973 aaPredicted RBP21.87■■□□□ 1.09
RABGGTA-219ENST00000560871 RGS12O14924 1447 aa21.86■■□□□ 1.09
RABGGTA-219ENST00000560871 CABLES1Q8TDN4 633 aa21.85■■□□□ 1.09
RABGGTA-219ENST00000560871 SLIT2O94813 1529 aa21.85■■□□□ 1.09
RABGGTA-219ENST00000560871 ACEP12821 1306 aa21.84■■□□□ 1.09
RABGGTA-219ENST00000560871 LMOD2Q6P5Q4 547 aa21.84■■□□□ 1.09
RABGGTA-219ENST00000560871 NGDNQ8NEJ9 315 aaKnown RBP21.84■■□□□ 1.09
RABGGTA-219ENST00000560871 CRYBG1Q9Y4K1 1723 aa21.82■■□□□ 1.08
RABGGTA-219ENST00000560871 PLCH1Q4KWH8 1693 aa21.82■■□□□ 1.08
RABGGTA-219ENST00000560871 NWD2Q9ULI1 1742 aa21.81■■□□□ 1.08
RABGGTA-219ENST00000560871 HAP1P54257 671 aaPredicted RBP21.81■■□□□ 1.08
RABGGTA-219ENST00000560871 PUS7Q96PZ0 661 aaKnown RBP21.81■■□□□ 1.08
RABGGTA-219ENST00000560871 CABP1Q9NZU7 370 aa21.81■■□□□ 1.08
RABGGTA-219ENST00000560871 NRKQ7Z2Y5 1582 aa21.81■■□□□ 1.08
RABGGTA-219ENST00000560871 AKAP12Q02952 1782 aa21.81■■□□□ 1.08
RABGGTA-219ENST00000560871 SLC24A1O60721 1099 aa21.8■■□□□ 1.08
RABGGTA-219ENST00000560871 UPF1Q92900 1129 aaKnown RBP eCLIP21.8■■□□□ 1.08
RABGGTA-219ENST00000560871 USP6P35125 1406 aa21.8■■□□□ 1.08
RABGGTA-219ENST00000560871 CD163L1Q9NR16 1453 aa21.79■■□□□ 1.08
RABGGTA-219ENST00000560871 PLEKHG5O94827 1062 aa21.79■■□□□ 1.08
RABGGTA-219ENST00000560871 UNC5CLQ8IV45 518 aa21.79■■□□□ 1.08
RABGGTA-219ENST00000560871 CPSF1Q10570 1443 aaKnown RBP21.79■■□□□ 1.08
RABGGTA-219ENST00000560871 SSH2Q76I76 1423 aa21.78■■□□□ 1.08
RABGGTA-219ENST00000560871 MON2Q7Z3U7 1717 aa21.77■■□□□ 1.08
RABGGTA-219ENST00000560871 GJD4Q96KN9 370 aaPredicted RBP21.77■■□□□ 1.08
RABGGTA-219ENST00000560871 BRD4O60885 1362 aaPredicted RBP21.76■■□□□ 1.07
RABGGTA-219ENST00000560871 PAK3O75914 559 aaPredicted RBP21.76■■□□□ 1.07
RABGGTA-219ENST00000560871 TMF1P82094 1093 aa21.76■■□□□ 1.07
RABGGTA-219ENST00000560871 GLI3P10071 1580 aa21.75■■□□□ 1.07
RABGGTA-219ENST00000560871 EIF4G2P78344 907 aaKnown RBP eCLIP21.75■■□□□ 1.07
RABGGTA-219ENST00000560871 FAM83GA6ND36 823 aa21.74■■□□□ 1.07
RABGGTA-219ENST00000560871 HSPA5P11021 654 aaKnown RBP21.74■■□□□ 1.07
RABGGTA-219ENST00000560871 COL14A1Q05707 1796 aaKnown RBP21.74■■□□□ 1.07
RABGGTA-219ENST00000560871 NINLQ9Y2I6 1382 aa21.74■■□□□ 1.07
RABGGTA-219ENST00000560871 PHRF1Q9P1Y6 1649 aaKnown RBP21.73■■□□□ 1.07
RABGGTA-219ENST00000560871 NRAPQ86VF7 1730 aa21.73■■□□□ 1.07
RABGGTA-219ENST00000560871 MYOM1P52179 1685 aa21.72■■□□□ 1.07
RABGGTA-219ENST00000560871 PIK3C2AO00443 1686 aa21.72■■□□□ 1.07
RABGGTA-219ENST00000560871 A0A1W2PP64 1363 aa21.71■■□□□ 1.07
RABGGTA-219ENST00000560871 VPS72Q15906 364 aa21.7■■□□□ 1.06
RABGGTA-219ENST00000560871 SLC12A5Q9H2X9 1139 aa21.7■■□□□ 1.06
RABGGTA-219ENST00000560871 ZNF692Q9BU19 519 aaPredicted RBP21.69■■□□□ 1.06
RABGGTA-219ENST00000560871 TMC1Q8TDI8 760 aa21.68■■□□□ 1.06
RABGGTA-219ENST00000560871 KTN1Q86UP2 1357 aaKnown RBP21.68■■□□□ 1.06
RABGGTA-219ENST00000560871 BRWD3Q6RI45 1802 aa21.68■■□□□ 1.06
RABGGTA-219ENST00000560871 CDCA8Q53HL2 280 aa21.67■■□□□ 1.06
RABGGTA-219ENST00000560871 USP19O94966 1318 aa21.66■■□□□ 1.06
RABGGTA-219ENST00000560871 TTC21BQ7Z4L5 1316 aa21.66■■□□□ 1.06
RABGGTA-219ENST00000560871 USP54Q70EL1 1684 aa21.66■■□□□ 1.06
RABGGTA-219ENST00000560871 SLIT3O75094 1523 aa21.65■■□□□ 1.06
RABGGTA-219ENST00000560871 EDC4Q6P2E9 1401 aaKnown RBP21.65■■□□□ 1.06
RABGGTA-219ENST00000560871 ANKRD36BQ8N2N9 1353 aa21.65■■□□□ 1.06
RABGGTA-219ENST00000560871 NUTM2GQ5VZR2 741 aa21.65■■□□□ 1.06
RABGGTA-219ENST00000560871 BTG4Q9NY30 223 aa21.65■■□□□ 1.06
RABGGTA-219ENST00000560871 TTC21AQ8NDW8 1320 aa21.64■■□□□ 1.05
RABGGTA-219ENST00000560871 ONECUT3O60422 494 aaPredicted RBP21.64■■□□□ 1.05
RABGGTA-219ENST00000560871 ABTB2Q8N961 1025 aa21.64■■□□□ 1.05
RABGGTA-219ENST00000560871 HDGFL2Q7Z4V5 671 aaPredicted RBP21.63■■□□□ 1.05
RABGGTA-219ENST00000560871 TERF2IPQ9NYB0 399 aa21.63■■□□□ 1.05
RABGGTA-219ENST00000560871 PRDM11Q9NQV5 511 aa21.62■■□□□ 1.05
RABGGTA-219ENST00000560871 CCDC9Q9Y3X0 531 aaKnown RBP21.62■■□□□ 1.05
RABGGTA-219ENST00000560871 KIAA0232Q92628 1395 aa21.61■■□□□ 1.05
RABGGTA-219ENST00000560871 NLRP13Q86W25 1043 aa21.6■■□□□ 1.05
RABGGTA-219ENST00000560871 ZC3H6P61129 1189 aaKnown RBP21.59■■□□□ 1.05
RABGGTA-219ENST00000560871 SEPT12Q8IYM1 358 aa21.59■■□□□ 1.05
RABGGTA-219ENST00000560871 USP31Q70CQ4 1352 aa21.59■■□□□ 1.05
RABGGTA-219ENST00000560871 C11orf95C9JLR9 678 aaPredicted RBP21.58■■□□□ 1.05
RABGGTA-219ENST00000560871 OVOS2A0A0J9YW53 1432 aa21.57■■□□□ 1.04
RABGGTA-219ENST00000560871 OVOS2Q6IE36 1432 aa21.57■■□□□ 1.04
RABGGTA-219ENST00000560871 CHRNA2Q15822 529 aa21.57■■□□□ 1.04
RABGGTA-219ENST00000560871 SPATA31A5Q5VU36 1347 aa21.56■■□□□ 1.04
RABGGTA-219ENST00000560871 SPATA31A7Q8IWB4 1347 aa21.56■■□□□ 1.04
RABGGTA-219ENST00000560871 NLRP6P59044 892 aa21.56■■□□□ 1.04
RABGGTA-219ENST00000560871 CPDO75976 1380 aa21.56■■□□□ 1.04
RABGGTA-219ENST00000560871 LMO7Q8WWI1 1683 aa21.56■■□□□ 1.04
RABGGTA-219ENST00000560871 NFAT5O94916 1531 aa21.55■■□□□ 1.04
RABGGTA-219ENST00000560871 GCP02774 474 aa21.55■■□□□ 1.04
RABGGTA-219ENST00000560871 CCDC125Q86Z20 511 aa21.55■■□□□ 1.04
RABGGTA-219ENST00000560871 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.55■■□□□ 1.04
RABGGTA-219ENST00000560871 NME9Q86XW9 330 aa21.54■■□□□ 1.04
RABGGTA-219ENST00000560871 CAMTA1Q9Y6Y1 1673 aa21.53■■□□□ 1.04
RABGGTA-219ENST00000560871 FAM98CQ17RN3 349 aaKnown RBP21.53■■□□□ 1.04
RABGGTA-219ENST00000560871 KIF7Q2M1P5 1343 aa21.53■■□□□ 1.04
RABGGTA-219ENST00000560871 ZRANB1Q9UGI0 708 aa21.52■■□□□ 1.04
RABGGTA-219ENST00000560871 THSD7AQ9UPZ6 1657 aa21.52■■□□□ 1.04
RABGGTA-219ENST00000560871 KRT27Q7Z3Y8 459 aa21.51■■□□□ 1.03
RABGGTA-219ENST00000560871 NSD3Q9BZ95 1437 aa21.51■■□□□ 1.03
RABGGTA-219ENST00000560871 SPATA31A1Q5TZJ5 1347 aa21.51■■□□□ 1.03
RABGGTA-219ENST00000560871 KIF20BQ96Q89 1820 aa21.5■■□□□ 1.03
RABGGTA-219ENST00000560871 POLR3GLQ9BT43 218 aa21.5■■□□□ 1.03
RABGGTA-219ENST00000560871 STRN4Q9NRL3 753 aa21.5■■□□□ 1.03
RABGGTA-219ENST00000560871 CARD14Q9BXL6 1004 aa21.49■■□□□ 1.03
RABGGTA-219ENST00000560871 COL18A1P39060 1754 aa21.48■■□□□ 1.03
RABGGTA-219ENST00000560871 BLMP54132 1417 aaPredicted RBP21.47■■□□□ 1.03
RABGGTA-219ENST00000560871 A0A0G2JS52 829 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms