RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 TWISTNBQ3B726 338 aaPredicted RBP15.11■□□□□ 0.01
SYNM-203ENST00000560674 FYCO1Q9BQS8 1478 aa15.11■□□□□ 0.01
SYNM-203ENST00000560674 DNAJC2Q99543 621 aaKnown RBP15.11■□□□□ 0.01
SYNM-203ENST00000560674 C1orf115Q9H7X2 142 aa15.11■□□□□ 0.01
SYNM-203ENST00000560674 TBC1D2BQ9UPU7 963 aa15.11■□□□□ 0.01
SYNM-203ENST00000560674 PRKAR2BP31323 418 aa15.1■□□□□ 0.01
SYNM-203ENST00000560674 ERC1Q8IUD2 1116 aa15.1■□□□□ 0.01
SYNM-203ENST00000560674 FMNL2Q96PY5 1086 aa15.1■□□□□ 0.01
SYNM-203ENST00000560674 IGF1RP08069 1367 aa15.1■□□□□ 0.01
SYNM-203ENST00000560674 RRBP1Q9P2E9 1410 aaKnown RBP15.1■□□□□ 0.01
SYNM-203ENST00000560674 H0YHG0 523 aa15.1■□□□□ 0.01
SYNM-203ENST00000560674 TMEM132EQ6IEE7 984 aa15.1■□□□□ 0.01
SYNM-203ENST00000560674 BACH2Q9BYV9 841 aa15.1■□□□□ 0.01
SYNM-203ENST00000560674 NOB1Q9ULX3 412 aaKnown RBP15.1■□□□□ 0.01
SYNM-203ENST00000560674 GNAI2P04899 355 aa15.1■□□□□ 0.01
SYNM-203ENST00000560674 SCAPERQ9BY12 1400 aa15.1■□□□□ 0.01
SYNM-203ENST00000560674 KDM4AO75164 1064 aa15.09■□□□□ 0.01
SYNM-203ENST00000560674 HSP90AB2PQ58FF8 381 aa15.09■□□□□ 0.01
SYNM-203ENST00000560674 MYO6Q9UM54 1294 aa15.09■□□□□ 0.01
SYNM-203ENST00000560674 STK38Q15208 465 aa15.09■□□□□ 0.01
SYNM-203ENST00000560674 NLRP2Q9NX02 1062 aa15.09■□□□□ 0.01
SYNM-203ENST00000560674 GAPVD1Q14C86 1478 aa15.09■□□□□ 0.01
SYNM-203ENST00000560674 NCOA2Q15596 1464 aa15.09■□□□□ 0.01
SYNM-203ENST00000560674 AKNAQ7Z591 1439 aa15.09■□□□□ 0.01
SYNM-203ENST00000560674 SYNJ1O43426 1573 aa15.08■□□□□ 0.01
SYNM-203ENST00000560674 CCDC192P0DO97 292 aa15.08■□□□□ 0
SYNM-203ENST00000560674 AEBP1Q8IUX7 1158 aa15.08■□□□□ 0
SYNM-203ENST00000560674 SPC24Q8NBT2 197 aa15.08■□□□□ 0
SYNM-203ENST00000560674 K7ELQ4 463 aaPredicted RBP15.08■□□□□ 0
SYNM-203ENST00000560674 MAGEC2Q9UBF1 373 aaPredicted RBP15.08■□□□□ 0
SYNM-203ENST00000560674 FBXO3Q9UK99 471 aa15.08■□□□□ 0
SYNM-203ENST00000560674 ATP2B1P20020 1258 aa15.08■□□□□ 0
SYNM-203ENST00000560674 PIP4K2AP48426 406 aaPredicted RBP15.08■□□□□ 0
SYNM-203ENST00000560674 NLRP6P59044 892 aa15.08■□□□□ 0
SYNM-203ENST00000560674 DHX8Q14562 1220 aaKnown RBP15.08■□□□□ 0
SYNM-203ENST00000560674 BCAR3O75815 825 aa15.07■□□□□ 0
SYNM-203ENST00000560674 CALRP27797 417 aaKnown RBP15.07■□□□□ 0
SYNM-203ENST00000560674 FGD5Q6ZNL6 1462 aa15.07■□□□□ 0
SYNM-203ENST00000560674 TXLNAP40222 546 aa15.07■□□□□ 0
SYNM-203ENST00000560674 CCDC191Q8NCU4 936 aa15.07■□□□□ 0
SYNM-203ENST00000560674 WDR33Q9C0J8 1336 aaKnown RBP15.07■□□□□ 0
SYNM-203ENST00000560674 ERICH3Q5RHP9 1530 aa15.07■□□□□ 0
SYNM-203ENST00000560674 CYP46A1Q9Y6A2 500 aa15.07■□□□□ 0
SYNM-203ENST00000560674 ZFYVE27Q5T4F4 411 aa15.07■□□□□ 0
SYNM-203ENST00000560674 NUTM2GQ5VZR2 741 aa15.07■□□□□ 0
SYNM-203ENST00000560674 GRPEL1Q9HAV7 217 aa15.06■□□□□ 0
SYNM-203ENST00000560674 RBM10P98175 930 aaKnown RBP15.06■□□□□ 0
SYNM-203ENST00000560674 CEBPZQ03701 1054 aaKnown RBP15.06■□□□□ 0
SYNM-203ENST00000560674 SAMD1Q6SPF0 538 aaPredicted RBP15.06■□□□□ 0
SYNM-203ENST00000560674 JMYQ8N9B5 988 aa15.06■□□□□ 0
SYNM-203ENST00000560674 MTMR7Q9Y216 660 aa15.06■□□□□ 0
SYNM-203ENST00000560674 ANKRD1Q15327 319 aa15.05■□□□□ 0
SYNM-203ENST00000560674 IL27Q8NEV9 243 aa15.05■□□□□ 0
SYNM-203ENST00000560674 TSR2Q969E8 191 aaKnown RBP15.05■□□□□ 0
SYNM-203ENST00000560674 LEKR1Q6ZMV7 388 aa15.05■□□□□ 0
SYNM-203ENST00000560674 PRDM2Q13029 1718 aa15.05■□□□□ 0
SYNM-203ENST00000560674 CASKIN1Q8WXD9 1431 aa15.05■□□□□ -0
SYNM-203ENST00000560674 RDXP35241 583 aaKnown RBP15.05■□□□□ -0
SYNM-203ENST00000560674 BRPF1P55201 1214 aaPredicted RBP15.05■□□□□ -0
SYNM-203ENST00000560674 CFAP70Q5T0N1 1121 aa15.05■□□□□ -0
SYNM-203ENST00000560674 CT47B1P0C2W7 299 aaPredicted RBP15.05■□□□□ -0
SYNM-203ENST00000560674 TNMDQ9H2S6 317 aa15.05■□□□□ -0
SYNM-203ENST00000560674 SERPINC1P01008 464 aa15.04■□□□□ -0
SYNM-203ENST00000560674 CCT4P50991 539 aaKnown RBP15.04■□□□□ -0
SYNM-203ENST00000560674 CDK5RAP3Q96JB5 506 aa15.04■□□□□ -0
SYNM-203ENST00000560674 LRRCC1Q9C099 1032 aa15.04■□□□□ -0
SYNM-203ENST00000560674 SMG6Q86US8 1419 aaKnown RBP15.04■□□□□ -0
SYNM-203ENST00000560674 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.04■□□□□ -03e-10■■■■■ 153.8
SYNM-203ENST00000560674 AXDND1Q5T1B0 1012 aaPredicted RBP15.03■□□□□ -0
SYNM-203ENST00000560674 SLC4A2P04920 1241 aa15.03■□□□□ -0
SYNM-203ENST00000560674 KRT85P78386 507 aa15.03■□□□□ -0
SYNM-203ENST00000560674 PLEKHO1Q53GL0 409 aaPredicted RBP15.03■□□□□ -0
SYNM-203ENST00000560674 SLC3A2P08195 630 aaKnown RBP15.03■□□□□ -0
SYNM-203ENST00000560674 WDR63Q8IWG1 891 aa15.03■□□□□ -0
SYNM-203ENST00000560674 MVPQ14764 893 aaKnown RBP15.03■□□□□ -0
SYNM-203ENST00000560674 CCDC112Q8NEF3 446 aa15.03■□□□□ -0
SYNM-203ENST00000560674 ZNHIT6Q9NWK9 470 aaKnown RBP15.02■□□□□ -0
SYNM-203ENST00000560674 ATF3P18847 181 aa15.02■□□□□ -0
SYNM-203ENST00000560674 DACH1Q9UI36 760 aa15.02■□□□□ -0
SYNM-203ENST00000560674 CCDC158Q5M9N0 1113 aa15.02□□□□□ -0.01
SYNM-203ENST00000560674 TTC39AQ5SRH9 613 aa15.02□□□□□ -0.01
SYNM-203ENST00000560674 ATF7IPQ6VMQ6 1270 aa15.02□□□□□ -0.01
SYNM-203ENST00000560674 CIZ1Q9ULV3 898 aaPredicted RBP15.01□□□□□ -0.01
SYNM-203ENST00000560674 IKQ13123 557 aaPredicted RBP15.01□□□□□ -0.01
SYNM-203ENST00000560674 CHD1LQ86WJ1 897 aa15.01□□□□□ -0.01
SYNM-203ENST00000560674 CCAR1Q8IX12 1150 aaKnown RBP15.01□□□□□ -0.01
SYNM-203ENST00000560674 PNISRQ8TF01 805 aaKnown RBP15.01□□□□□ -0.01
SYNM-203ENST00000560674 TSPYL1Q9H0U9 437 aa15.01□□□□□ -0.01
SYNM-203ENST00000560674 ME1P48163 572 aa15.01□□□□□ -0.01
SYNM-203ENST00000560674 STK3Q13188 491 aa15.01□□□□□ -0.01
SYNM-203ENST00000560674 SKIDA1Q1XH10 827 aa15.01□□□□□ -0.01
SYNM-203ENST00000560674 KIF6Q6ZMV9 814 aa15.01□□□□□ -0.01
SYNM-203ENST00000560674 PPFIBP1Q86W92 1011 aa15.01□□□□□ -0.01
SYNM-203ENST00000560674 CNKSR2Q8WXI2 1034 aa15.01□□□□□ -0.01
SYNM-203ENST00000560674 TOP2BQ02880 1626 aa15□□□□□ -0.01
SYNM-203ENST00000560674 HDGFL1Q5TGJ6 251 aa15□□□□□ -0.01
SYNM-203ENST00000560674 HFM1A2PYH4 1435 aa15□□□□□ -0.01
SYNM-203ENST00000560674 DDX24Q9GZR7 859 aaKnown RBP eCLIP15□□□□□ -0.01
SYNM-203ENST00000560674 LARP1BQ659C4 914 aaKnown RBP15□□□□□ -0.01
SYNM-203ENST00000560674 SRCIN1Q9C0H9 1055 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms