RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 PLIN1O60240 522 aa18.99■□□□□ 0.63
RABGGTA-212ENST00000559974 SIRT1Q96EB6 747 aa18.98■□□□□ 0.63
RABGGTA-212ENST00000559974 FANCIQ9NVI1 1328 aa18.98■□□□□ 0.63
RABGGTA-212ENST00000559974 MTHFSP49914 203 aa18.97■□□□□ 0.63
RABGGTA-212ENST00000559974 CFAP53Q96M91 514 aa18.97■□□□□ 0.63
RABGGTA-212ENST00000559974 CD163L1Q9NR16 1453 aa18.97■□□□□ 0.63
RABGGTA-212ENST00000559974 NUTM2FA1L443 756 aa18.97■□□□□ 0.63
RABGGTA-212ENST00000559974 KIF20BQ96Q89 1820 aa18.97■□□□□ 0.63
RABGGTA-212ENST00000559974 IQSEC2Q5JU85 1478 aa18.96■□□□□ 0.63
RABGGTA-212ENST00000559974 E9PSI1 815 aa18.95■□□□□ 0.62
RABGGTA-212ENST00000559974 TERF2IPQ9NYB0 399 aa18.95■□□□□ 0.62
RABGGTA-212ENST00000559974 RGPD8O14715 1765 aaPredicted RBP18.95■□□□□ 0.62
RABGGTA-212ENST00000559974 ADGRB2O60241 1585 aa18.94■□□□□ 0.62
RABGGTA-212ENST00000559974 CRBNQ96SW2 442 aa18.94■□□□□ 0.62
RABGGTA-212ENST00000559974 C14orf37Q86TY3 774 aa18.93■□□□□ 0.62
RABGGTA-212ENST00000559974 RUNDC1Q96C34 613 aa18.93■□□□□ 0.62
RABGGTA-212ENST00000559974 CDK19Q9BWU1 502 aa18.93■□□□□ 0.62
RABGGTA-212ENST00000559974 SPINK5Q9NQ38 1064 aaPredicted RBP18.93■□□□□ 0.62
RABGGTA-212ENST00000559974 ADGRL3Q9HAR2 1447 aa18.93■□□□□ 0.62
RABGGTA-212ENST00000559974 PRR36Q9H6K5 1346 aa18.92■□□□□ 0.62
RABGGTA-212ENST00000559974 WASLO00401 505 aaPredicted RBP18.92■□□□□ 0.62
RABGGTA-212ENST00000559974 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.92■□□□□ 0.62
RABGGTA-212ENST00000559974 WWC1Q8IX03 1113 aa18.91■□□□□ 0.62
RABGGTA-212ENST00000559974 FMN2Q9NZ56 1722 aa18.91■□□□□ 0.62
RABGGTA-212ENST00000559974 C20orf194Q5TEA3 1177 aa18.9■□□□□ 0.62
RABGGTA-212ENST00000559974 HDGFL2Q7Z4V5 671 aaPredicted RBP18.9■□□□□ 0.62
RABGGTA-212ENST00000559974 CDC42BPGQ6DT37 1551 aa18.89■□□□□ 0.61
RABGGTA-212ENST00000559974 ATP7BP35670 1465 aa18.88■□□□□ 0.61
RABGGTA-212ENST00000559974 GGNBP2Q9H3C7 697 aa18.88■□□□□ 0.61
RABGGTA-212ENST00000559974 FYB1O15117 783 aa18.88■□□□□ 0.61
RABGGTA-212ENST00000559974 TCP11L2Q8N4U5 519 aa18.88■□□□□ 0.61
RABGGTA-212ENST00000559974 COL3A1P02461 1466 aaPredicted RBP18.87■□□□□ 0.61
RABGGTA-212ENST00000559974 PHF23Q9BUL5 403 aaPredicted RBP18.86■□□□□ 0.61
RABGGTA-212ENST00000559974 CABP1Q9NZU7 370 aa18.86■□□□□ 0.61
RABGGTA-212ENST00000559974 NCBP3Q53F19 620 aaKnown RBP18.86■□□□□ 0.61
RABGGTA-212ENST00000559974 CCDC27Q2M243 656 aa18.84■□□□□ 0.61
RABGGTA-212ENST00000559974 NUDT16Q96DE0 195 aaKnown RBP18.84■□□□□ 0.61
RABGGTA-212ENST00000559974 C19orf44Q9H6X5 657 aa18.84■□□□□ 0.61
RABGGTA-212ENST00000559974 TOPAZ1Q8N9V7 1692 aa18.84■□□□□ 0.61
RABGGTA-212ENST00000559974 U2AF1L5P0DN76 240 aaPredicted RBP18.84■□□□□ 0.61
RABGGTA-212ENST00000559974 U2AF1Q01081 240 aaKnown RBP eCLIP18.84■□□□□ 0.61
RABGGTA-212ENST00000559974 NEUROD2Q15784 382 aa18.84■□□□□ 0.61
RABGGTA-212ENST00000559974 RRP7AQ9Y3A4 280 aaKnown RBP18.84■□□□□ 0.61
RABGGTA-212ENST00000559974 WDR63Q8IWG1 891 aa18.83■□□□□ 0.61
RABGGTA-212ENST00000559974 MSH6P52701 1360 aa18.83■□□□□ 0.6
RABGGTA-212ENST00000559974 TCERG1O14776 1098 aaKnown RBP18.82■□□□□ 0.6
RABGGTA-212ENST00000559974 MSH5O43196 834 aa18.82■□□□□ 0.6
RABGGTA-212ENST00000559974 ANP32EQ9BTT0 268 aa18.82■□□□□ 0.6
RABGGTA-212ENST00000559974 MST1RQ04912 1400 aa18.82■□□□□ 0.6
RABGGTA-212ENST00000559974 NCOA3Q9Y6Q9 1424 aa18.82■□□□□ 0.6
RABGGTA-212ENST00000559974 MYT1Q01538 1121 aa18.81■□□□□ 0.6
RABGGTA-212ENST00000559974 BCAR3O75815 825 aa18.81■□□□□ 0.6
RABGGTA-212ENST00000559974 ORAI2Q96SN7 254 aa18.81■□□□□ 0.6
RABGGTA-212ENST00000559974 MAP2P11137 1827 aaKnown RBP18.8■□□□□ 0.6
RABGGTA-212ENST00000559974 PPIP5K1Q6PFW1 1433 aa18.8■□□□□ 0.6
RABGGTA-212ENST00000559974 PMFBP1Q8TBY8 1022 aa18.8■□□□□ 0.6
RABGGTA-212ENST00000559974 MON2Q7Z3U7 1717 aa18.8■□□□□ 0.6
RABGGTA-212ENST00000559974 ATF3P18847 181 aa18.79■□□□□ 0.6
RABGGTA-212ENST00000559974 C1orf167Q5SNV9 1468 aa18.79■□□□□ 0.6
RABGGTA-212ENST00000559974 ITSN1Q15811 1721 aa18.79■□□□□ 0.6
RABGGTA-212ENST00000559974 AKAP12Q02952 1782 aa18.79■□□□□ 0.6
RABGGTA-212ENST00000559974 PNPLA6Q8IY17 1366 aa18.78■□□□□ 0.6
RABGGTA-212ENST00000559974 KDM2BQ8NHM5 1336 aa18.78■□□□□ 0.6
RABGGTA-212ENST00000559974 CPSF1Q10570 1443 aaKnown RBP18.78■□□□□ 0.6
RABGGTA-212ENST00000559974 DCCP43146 1447 aa18.77■□□□□ 0.6
RABGGTA-212ENST00000559974 U2SURPO15042 1029 aaKnown RBP18.77■□□□□ 0.59
RABGGTA-212ENST00000559974 MS4A1P11836 297 aa18.77■□□□□ 0.59
RABGGTA-212ENST00000559974 EDC4Q6P2E9 1401 aaKnown RBP18.77■□□□□ 0.59
RABGGTA-212ENST00000559974 DDX17Q92841 729 aaKnown RBP18.77■□□□□ 0.59
RABGGTA-212ENST00000559974 PLEKHF1Q96S99 279 aa18.76■□□□□ 0.59
RABGGTA-212ENST00000559974 CCDC61Q9Y6R9 512 aa18.76■□□□□ 0.59
RABGGTA-212ENST00000559974 ESCO1Q5FWF5 840 aa18.75■□□□□ 0.59
RABGGTA-212ENST00000559974 CENPQQ7L2Z9 268 aaPredicted RBP18.75■□□□□ 0.59
RABGGTA-212ENST00000559974 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.75■□□□□ 0.59
RABGGTA-212ENST00000559974 ANKARQ7Z5J8 1434 aa18.75■□□□□ 0.59
RABGGTA-212ENST00000559974 CADPS2Q86UW7 1296 aa18.75■□□□□ 0.59
RABGGTA-212ENST00000559974 DIAPH1O60610 1272 aaKnown RBP18.74■□□□□ 0.59
RABGGTA-212ENST00000559974 PDE3AQ14432 1141 aa18.74■□□□□ 0.59
RABGGTA-212ENST00000559974 MYH16Q9H6N6 1097 aa18.74■□□□□ 0.59
RABGGTA-212ENST00000559974 CERKQ8TCT0 537 aa18.73■□□□□ 0.59
RABGGTA-212ENST00000559974 MAPK8IP3Q9UPT6 1336 aa18.73■□□□□ 0.59
RABGGTA-212ENST00000559974 SLAIN2Q9P270 581 aa18.73■□□□□ 0.59
RABGGTA-212ENST00000559974 ACEP12821 1306 aa18.72■□□□□ 0.59
RABGGTA-212ENST00000559974 XPCQ01831 940 aaPredicted RBP18.72■□□□□ 0.59
RABGGTA-212ENST00000559974 TMPOP42166 694 aaKnown RBP18.72■□□□□ 0.59
RABGGTA-212ENST00000559974 RARSP54136 660 aaKnown RBP18.72■□□□□ 0.59
RABGGTA-212ENST00000559974 CANXP27824 592 aaKnown RBP18.71■□□□□ 0.59
RABGGTA-212ENST00000559974 PNNQ9H307 717 aaKnown RBP18.71■□□□□ 0.59
RABGGTA-212ENST00000559974 PHF8Q9UPP1 1060 aa18.71■□□□□ 0.59
RABGGTA-212ENST00000559974 BRINP3Q76B58 766 aa18.7■□□□□ 0.58
RABGGTA-212ENST00000559974 PLEKHG3A1L390 1219 aa18.7■□□□□ 0.58
RABGGTA-212ENST00000559974 PDE4AP27815 886 aa18.7■□□□□ 0.58
RABGGTA-212ENST00000559974 POLKQ9UBT6 870 aa18.7■□□□□ 0.58
RABGGTA-212ENST00000559974 ROBO1Q9Y6N7 1651 aa18.69■□□□□ 0.58
RABGGTA-212ENST00000559974 FOXO3O43524 673 aa18.69■□□□□ 0.58
RABGGTA-212ENST00000559974 ANP32AP39687 249 aaKnown RBP18.68■□□□□ 0.58
RABGGTA-212ENST00000559974 BACH2Q9BYV9 841 aa18.68■□□□□ 0.58
RABGGTA-212ENST00000559974 TRIM35Q9UPQ4 493 aa18.68■□□□□ 0.58
RABGGTA-212ENST00000559974 NRKQ7Z2Y5 1582 aa18.67■□□□□ 0.58
RABGGTA-212ENST00000559974 CDK12Q9NYV4 1490 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms