RNA–Protein interactions for RNA: ENST00000558863.5

ZEB1-214, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 5

Gene ZEB1, Length 1,355 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-214ENST00000558863 KIF7Q2M1P5 1343 aa33.79■■■■□ 3
ZEB1-214ENST00000558863 MON2Q7Z3U7 1717 aa33.78■■■■□ 3
ZEB1-214ENST00000558863 A0A1W2PP64 1363 aa33.77■■■■□ 3
ZEB1-214ENST00000558863 PNPLA6Q8IY17 1366 aa33.77■■■■□ 3
ZEB1-214ENST00000558863 PAK3O75914 559 aaPredicted RBP33.76■■■■□ 3
ZEB1-214ENST00000558863 SSH2Q76I76 1423 aa33.75■■■□□ 2.99
ZEB1-214ENST00000558863 CCDC7Q96M83 1385 aa33.75■■■□□ 2.99
ZEB1-214ENST00000558863 EDC4Q6P2E9 1401 aaKnown RBP33.74■■■□□ 2.99
ZEB1-214ENST00000558863 ALS2Q96Q42 1657 aa33.74■■■□□ 2.99
ZEB1-214ENST00000558863 TTC21AQ8NDW8 1320 aa33.74■■■□□ 2.99
ZEB1-214ENST00000558863 SPATA31A6Q5VVP1 1343 aa33.73■■■□□ 2.99
ZEB1-214ENST00000558863 COL22A1Q8NFW1 1626 aaPredicted RBP33.72■■■□□ 2.99
ZEB1-214ENST00000558863 NRKQ7Z2Y5 1582 aa33.71■■■□□ 2.99
ZEB1-214ENST00000558863 LMOD2Q6P5Q4 547 aa33.71■■■□□ 2.99
ZEB1-214ENST00000558863 WASHC2AQ641Q2 1341 aa33.7■■■□□ 2.99
ZEB1-214ENST00000558863 TTC21BQ7Z4L5 1316 aa33.7■■■□□ 2.99
ZEB1-214ENST00000558863 ABTB2Q8N961 1025 aa33.67■■■□□ 2.98
ZEB1-214ENST00000558863 MED1Q15648 1581 aaPredicted RBP33.64■■■□□ 2.98
ZEB1-214ENST00000558863 NLRP13Q86W25 1043 aa33.62■■■□□ 2.97
ZEB1-214ENST00000558863 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.6■■■□□ 2.973e-6■■■■□ 22.7
ZEB1-214ENST00000558863 PIK3C2AO00443 1686 aa33.6■■■□□ 2.97
ZEB1-214ENST00000558863 PANK3Q9H999 370 aa33.6■■■□□ 2.97
ZEB1-214ENST00000558863 NLRP6P59044 892 aa33.58■■■□□ 2.97
ZEB1-214ENST00000558863 NSD3Q9BZ95 1437 aa33.58■■■□□ 2.97
ZEB1-214ENST00000558863 CARD14Q9BXL6 1004 aa33.57■■■□□ 2.96
ZEB1-214ENST00000558863 USP31Q70CQ4 1352 aa33.56■■■□□ 2.96
ZEB1-214ENST00000558863 HAP1P54257 671 aaPredicted RBP33.56■■■□□ 2.96
ZEB1-214ENST00000558863 USP19O94966 1318 aa33.55■■■□□ 2.96
ZEB1-214ENST00000558863 CGNL1Q0VF96 1302 aa33.53■■■□□ 2.96
ZEB1-214ENST00000558863 NUTM2BA6NNL0 878 aaPredicted RBP33.53■■■□□ 2.96
ZEB1-214ENST00000558863 NUTM2EB1AL46 878 aaPredicted RBP33.53■■■□□ 2.96
ZEB1-214ENST00000558863 NUTM2GQ5VZR2 741 aa33.53■■■□□ 2.96
ZEB1-214ENST00000558863 NUTM2AQ8IVF1 878 aaPredicted RBP33.53■■■□□ 2.96
ZEB1-214ENST00000558863 ABCA3Q99758 1704 aa33.53■■■□□ 2.96
ZEB1-214ENST00000558863 CRYBG1Q9Y4K1 1723 aa33.53■■■□□ 2.96
ZEB1-214ENST00000558863 USP54Q70EL1 1684 aa33.53■■■□□ 2.96
ZEB1-214ENST00000558863 NME9Q86XW9 330 aa33.52■■■□□ 2.96
ZEB1-214ENST00000558863 LRP6O75581 1613 aa33.5■■■□□ 2.95
ZEB1-214ENST00000558863 CABLES1Q8TDN4 633 aa33.49■■■□□ 2.95
ZEB1-214ENST00000558863 KNSTRNQ9Y448 316 aa33.49■■■□□ 2.95
ZEB1-214ENST00000558863 PHRF1Q9P1Y6 1649 aaKnown RBP33.49■■■□□ 2.95
ZEB1-214ENST00000558863 SLIT3O75094 1523 aa33.48■■■□□ 2.95
ZEB1-214ENST00000558863 FYB1O15117 783 aa33.47■■■□□ 2.95
ZEB1-214ENST00000558863 MEX3CQ5U5Q3 659 aaKnown RBP33.47■■■□□ 2.95
ZEB1-214ENST00000558863 KIF20BQ96Q89 1820 aa33.47■■■□□ 2.95
ZEB1-214ENST00000558863 OVOS2A0A0J9YW53 1432 aa33.47■■■□□ 2.95
ZEB1-214ENST00000558863 OVOS2Q6IE36 1432 aa33.47■■■□□ 2.95
ZEB1-214ENST00000558863 KCNH5Q8NCM2 988 aa33.47■■■□□ 2.95
ZEB1-214ENST00000558863 COG3Q96JB2 828 aa33.47■■■□□ 2.95
ZEB1-214ENST00000558863 ZNF316A6NFI3 1004 aaPredicted RBP33.46■■■□□ 2.95
ZEB1-214ENST00000558863 NSD2O96028 1365 aa33.45■■■□□ 2.94
ZEB1-214ENST00000558863 PLEKHG5O94827 1062 aa33.45■■■□□ 2.94
ZEB1-214ENST00000558863 GCP02774 474 aa33.45■■■□□ 2.94
ZEB1-214ENST00000558863 MARF1Q9Y4F3 1742 aaKnown RBP33.44■■■□□ 2.94
ZEB1-214ENST00000558863 ADAMTS2O95450 1211 aa33.43■■■□□ 2.94
ZEB1-214ENST00000558863 ZRANB1Q9UGI0 708 aa33.41■■■□□ 2.94
ZEB1-214ENST00000558863 PER1O15534 1290 aaPredicted RBP33.4■■■□□ 2.94
ZEB1-214ENST00000558863 GGNBP2Q9H3C7 697 aa33.4■■■□□ 2.94
ZEB1-214ENST00000558863 CPDO75976 1380 aa33.39■■■□□ 2.94
ZEB1-214ENST00000558863 C8orf37Q96NL8 207 aa33.35■■■□□ 2.93
ZEB1-214ENST00000558863 ANKRD26Q9UPS8 1709 aa33.35■■■□□ 2.93
ZEB1-214ENST00000558863 NGLY1Q96IV0 654 aa33.34■■■□□ 2.93
ZEB1-214ENST00000558863 PRDM11Q9NQV5 511 aa33.34■■■□□ 2.93
ZEB1-214ENST00000558863 NPC1L1Q9UHC9 1359 aa33.34■■■□□ 2.93
ZEB1-214ENST00000558863 NFAT5O94916 1531 aa33.34■■■□□ 2.93
ZEB1-214ENST00000558863 KIAA0232Q92628 1395 aa33.34■■■□□ 2.93
ZEB1-214ENST00000558863 AMER1Q5JTC6 1135 aaPredicted RBP33.34■■■□□ 2.93
ZEB1-214ENST00000558863 ZC3H6P61129 1189 aaKnown RBP33.33■■■□□ 2.93
ZEB1-214ENST00000558863 COL14A1Q05707 1796 aaKnown RBP33.32■■■□□ 2.93
ZEB1-214ENST00000558863 DDX10Q13206 875 aaKnown RBP33.3■■■□□ 2.92
ZEB1-214ENST00000558863 FNBP4Q8N3X1 1017 aaPredicted RBP33.3■■■□□ 2.92
ZEB1-214ENST00000558863 FAM83GA6ND36 823 aa33.29■■■□□ 2.92
ZEB1-214ENST00000558863 SOX12O15370 315 aa33.29■■■□□ 2.92
ZEB1-214ENST00000558863 ARHGEF25Q86VW2 580 aa33.29■■■□□ 2.92
ZEB1-214ENST00000558863 PHF23Q9BUL5 403 aaPredicted RBP33.29■■■□□ 2.92
ZEB1-214ENST00000558863 ABCC6O95255 1503 aa33.27■■■□□ 2.92
ZEB1-214ENST00000558863 NWD2Q9ULI1 1742 aa33.26■■■□□ 2.92
ZEB1-214ENST00000558863 SLIT2O94813 1529 aa33.26■■■□□ 2.91
ZEB1-214ENST00000558863 AATKQ6ZMQ8 1374 aa33.26■■■□□ 2.91
ZEB1-214ENST00000558863 AFF2P51816 1311 aa33.26■■■□□ 2.91
ZEB1-214ENST00000558863 MORC1Q86VD1 984 aa33.25■■■□□ 2.91
ZEB1-214ENST00000558863 ZNF772Q68DY9 489 aaPredicted RBP33.24■■■□□ 2.91
ZEB1-214ENST00000558863 PLCH1Q4KWH8 1693 aa33.24■■■□□ 2.91
ZEB1-214ENST00000558863 CHRNA2Q15822 529 aa33.22■■■□□ 2.91
ZEB1-214ENST00000558863 USP21Q9UK80 565 aa33.21■■■□□ 2.91
ZEB1-214ENST00000558863 LTN1O94822 1766 aa33.2■■■□□ 2.91
ZEB1-214ENST00000558863 LMO7Q8WWI1 1683 aa33.2■■■□□ 2.91
ZEB1-214ENST00000558863 ZBTB7CA1YPR0 619 aa33.2■■■□□ 2.9
ZEB1-214ENST00000558863 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.19■■■□□ 2.9
ZEB1-214ENST00000558863 KIF24Q5T7B8 1368 aa33.19■■■□□ 2.9
ZEB1-214ENST00000558863 CC2D1BQ5T0F9 858 aaKnown RBP33.19■■■□□ 2.9
ZEB1-214ENST00000558863 BTG4Q9NY30 223 aa33.19■■■□□ 2.9
ZEB1-214ENST00000558863 UNC5CLQ8IV45 518 aa33.18■■■□□ 2.9
ZEB1-214ENST00000558863 BCL9LQ86UU0 1499 aa33.18■■■□□ 2.9
ZEB1-214ENST00000558863 MAP3K19Q56UN5 1328 aa33.18■■■□□ 2.9
ZEB1-214ENST00000558863 RTL1A6NKG5 1358 aa33.17■■■□□ 2.9
ZEB1-214ENST00000558863 COL18A1P39060 1754 aa33.16■■■□□ 2.9
ZEB1-214ENST00000558863 AMPHP49418 695 aa33.14■■■□□ 2.9
ZEB1-214ENST00000558863 IP6K1Q92551 441 aa33.14■■■□□ 2.9
ZEB1-214ENST00000558863 CAMTA1Q9Y6Y1 1673 aa33.14■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms