RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 SSH2Q76I76 1423 aa19.51■□□□□ 0.71
SUPT16H-208ENST00000557652 A0A1W2PP64 1363 aa19.5■□□□□ 0.71
SUPT16H-208ENST00000557652 JCADQ9P266 1359 aa19.5■□□□□ 0.71
SUPT16H-208ENST00000557652 C11orf95C9JLR9 678 aaPredicted RBP19.5■□□□□ 0.71
SUPT16H-208ENST00000557652 SPATA31A3Q5VYP0 1347 aa19.5■□□□□ 0.71
SUPT16H-208ENST00000557652 HSPA1LP34931 641 aa19.49■□□□□ 0.71
SUPT16H-208ENST00000557652 USP54Q70EL1 1684 aa19.49■□□□□ 0.71
SUPT16H-208ENST00000557652 WASHC2AQ641Q2 1341 aa19.49■□□□□ 0.71
SUPT16H-208ENST00000557652 MED1Q15648 1581 aaPredicted RBP19.47■□□□□ 0.71
SUPT16H-208ENST00000557652 POLR3GLQ9BT43 218 aa19.45■□□□□ 0.7
SUPT16H-208ENST00000557652 KIF20BQ96Q89 1820 aa19.45■□□□□ 0.7
SUPT16H-208ENST00000557652 SPATA31A6Q5VVP1 1343 aa19.45■□□□□ 0.7
SUPT16H-208ENST00000557652 DDX17Q92841 729 aaKnown RBP19.44■□□□□ 0.7
SUPT16H-208ENST00000557652 TTC21BQ7Z4L5 1316 aa19.44■□□□□ 0.7
SUPT16H-208ENST00000557652 PNPLA6Q8IY17 1366 aa19.44■□□□□ 0.7
SUPT16H-208ENST00000557652 PIK3C2AO00443 1686 aa19.43■□□□□ 0.7
SUPT16H-208ENST00000557652 XPCQ01831 940 aaPredicted RBP19.42■□□□□ 0.7
SUPT16H-208ENST00000557652 USP31Q70CQ4 1352 aa19.42■□□□□ 0.7
SUPT16H-208ENST00000557652 ZNF316A6NFI3 1004 aaPredicted RBP19.41■□□□□ 0.7
SUPT16H-208ENST00000557652 PAK3O75914 559 aaPredicted RBP19.41■□□□□ 0.7
SUPT16H-208ENST00000557652 NLRP13Q86W25 1043 aa19.41■□□□□ 0.7
SUPT16H-208ENST00000557652 CRYBG1Q9Y4K1 1723 aa19.41■□□□□ 0.7
SUPT16H-208ENST00000557652 NSD2O96028 1365 aa19.41■□□□□ 0.7
SUPT16H-208ENST00000557652 ABCA3Q99758 1704 aa19.4■□□□□ 0.7
SUPT16H-208ENST00000557652 ANKRD26Q9UPS8 1709 aa19.4■□□□□ 0.7
SUPT16H-208ENST00000557652 ABTB2Q8N961 1025 aa19.4■□□□□ 0.7
SUPT16H-208ENST00000557652 PANK3Q9H999 370 aa19.4■□□□□ 0.7
SUPT16H-208ENST00000557652 CGNL1Q0VF96 1302 aa19.4■□□□□ 0.7
SUPT16H-208ENST00000557652 ILDR1Q86SU0 546 aaPredicted RBP19.39■□□□□ 0.69
SUPT16H-208ENST00000557652 NSD3Q9BZ95 1437 aa19.39■□□□□ 0.69
SUPT16H-208ENST00000557652 MARF1Q9Y4F3 1742 aaKnown RBP19.39■□□□□ 0.69
SUPT16H-208ENST00000557652 NPC1L1Q9UHC9 1359 aa19.37■□□□□ 0.69
SUPT16H-208ENST00000557652 USP19O94966 1318 aa19.37■□□□□ 0.69
SUPT16H-208ENST00000557652 KNSTRNQ9Y448 316 aa19.37■□□□□ 0.69
SUPT16H-208ENST00000557652 PHRF1Q9P1Y6 1649 aaKnown RBP19.36■□□□□ 0.69
SUPT16H-208ENST00000557652 LMOD2Q6P5Q4 547 aa19.36■□□□□ 0.69
SUPT16H-208ENST00000557652 CARD14Q9BXL6 1004 aa19.36■□□□□ 0.69
SUPT16H-208ENST00000557652 SLIT3O75094 1523 aa19.35■□□□□ 0.69
SUPT16H-208ENST00000557652 NLRP6P59044 892 aa19.35■□□□□ 0.69
SUPT16H-208ENST00000557652 KCNH5Q8NCM2 988 aa19.35■□□□□ 0.69
SUPT16H-208ENST00000557652 OVOS2A0A0J9YW53 1432 aa19.34■□□□□ 0.69
SUPT16H-208ENST00000557652 OVOS2Q6IE36 1432 aa19.34■□□□□ 0.69
SUPT16H-208ENST00000557652 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.34■□□□□ 0.69
SUPT16H-208ENST00000557652 PER1O15534 1290 aaPredicted RBP19.33■□□□□ 0.68
SUPT16H-208ENST00000557652 FYB1O15117 783 aa19.32■□□□□ 0.68
SUPT16H-208ENST00000557652 COG3Q96JB2 828 aa19.32■□□□□ 0.68
SUPT16H-208ENST00000557652 ABCC6O95255 1503 aa19.3■□□□□ 0.68
SUPT16H-208ENST00000557652 HAP1P54257 671 aaPredicted RBP19.3■□□□□ 0.68
SUPT16H-208ENST00000557652 NME9Q86XW9 330 aa19.3■□□□□ 0.68
SUPT16H-208ENST00000557652 CPDO75976 1380 aa19.3■□□□□ 0.68
SUPT16H-208ENST00000557652 GCP02774 474 aa19.28■□□□□ 0.68
SUPT16H-208ENST00000557652 AMER1Q5JTC6 1135 aaPredicted RBP19.28■□□□□ 0.68
SUPT16H-208ENST00000557652 NWD2Q9ULI1 1742 aa19.28■□□□□ 0.68
SUPT16H-208ENST00000557652 COL14A1Q05707 1796 aaKnown RBP19.27■□□□□ 0.68
SUPT16H-208ENST00000557652 NFAT5O94916 1531 aa19.27■□□□□ 0.68
SUPT16H-208ENST00000557652 LTN1O94822 1766 aa19.27■□□□□ 0.67
SUPT16H-208ENST00000557652 MAP2P11137 1827 aaKnown RBP19.26■□□□□ 0.67
SUPT16H-208ENST00000557652 KIF24Q5T7B8 1368 aa19.26■□□□□ 0.67
SUPT16H-208ENST00000557652 AATKQ6ZMQ8 1374 aa19.25■□□□□ 0.67
SUPT16H-208ENST00000557652 NUTM2GQ5VZR2 741 aa19.25■□□□□ 0.67
SUPT16H-208ENST00000557652 LRP6O75581 1613 aa19.25■□□□□ 0.67
SUPT16H-208ENST00000557652 DDX10Q13206 875 aaKnown RBP19.24■□□□□ 0.67
SUPT16H-208ENST00000557652 GGNBP2Q9H3C7 697 aa19.24■□□□□ 0.67
SUPT16H-208ENST00000557652 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.22■□□□□ 0.67
SUPT16H-208ENST00000557652 CABLES1Q8TDN4 633 aa19.22■□□□□ 0.67
SUPT16H-208ENST00000557652 PLCH1Q4KWH8 1693 aa19.21■□□□□ 0.67
SUPT16H-208ENST00000557652 NUTM2BA6NNL0 878 aaPredicted RBP19.21■□□□□ 0.67
SUPT16H-208ENST00000557652 NUTM2EB1AL46 878 aaPredicted RBP19.21■□□□□ 0.67
SUPT16H-208ENST00000557652 MEX3CQ5U5Q3 659 aaKnown RBP19.21■□□□□ 0.67
SUPT16H-208ENST00000557652 NUTM2AQ8IVF1 878 aaPredicted RBP19.21■□□□□ 0.67
SUPT16H-208ENST00000557652 RTL1A6NKG5 1358 aa19.2■□□□□ 0.66
SUPT16H-208ENST00000557652 COL18A1P39060 1754 aa19.2■□□□□ 0.66
SUPT16H-208ENST00000557652 MORC1Q86VD1 984 aa19.2■□□□□ 0.66
SUPT16H-208ENST00000557652 ARHGEF25Q86VW2 580 aa19.2■□□□□ 0.66
SUPT16H-208ENST00000557652 PRDM11Q9NQV5 511 aa19.2■□□□□ 0.66
SUPT16H-208ENST00000557652 ZRANB1Q9UGI0 708 aa19.2■□□□□ 0.66
SUPT16H-208ENST00000557652 LMO7Q8WWI1 1683 aa19.2■□□□□ 0.66
SUPT16H-208ENST00000557652 KIAA0232Q92628 1395 aa19.19■□□□□ 0.66
SUPT16H-208ENST00000557652 FNBP4Q8N3X1 1017 aaPredicted RBP19.18■□□□□ 0.66
SUPT16H-208ENST00000557652 SLIT2O94813 1529 aa19.18■□□□□ 0.66
SUPT16H-208ENST00000557652 BLMP54132 1417 aaPredicted RBP19.17■□□□□ 0.66
SUPT16H-208ENST00000557652 ADAMTS2O95450 1211 aa19.17■□□□□ 0.66
SUPT16H-208ENST00000557652 FAM208AQ9UK61 1670 aaKnown RBP19.17■□□□□ 0.66
SUPT16H-208ENST00000557652 SMG6Q86US8 1419 aaKnown RBP19.17■□□□□ 0.66
SUPT16H-208ENST00000557652 ZC3H6P61129 1189 aaKnown RBP19.16■□□□□ 0.66
SUPT16H-208ENST00000557652 RALBP1Q15311 655 aa19.16■□□□□ 0.66
SUPT16H-208ENST00000557652 NGLY1Q96IV0 654 aa19.16■□□□□ 0.66
SUPT16H-208ENST00000557652 NRAPQ86VF7 1730 aa19.15■□□□□ 0.66
SUPT16H-208ENST00000557652 RGPD5Q99666 1765 aa19.15■□□□□ 0.66
SUPT16H-208ENST00000557652 PARD3Q8TEW0 1356 aa19.15■□□□□ 0.66
SUPT16H-208ENST00000557652 FAM83GA6ND36 823 aa19.14■□□□□ 0.65
SUPT16H-208ENST00000557652 CC2D1BQ5T0F9 858 aaKnown RBP19.14■□□□□ 0.65
SUPT16H-208ENST00000557652 ZNF772Q68DY9 489 aaPredicted RBP19.14■□□□□ 0.65
SUPT16H-208ENST00000557652 C8orf37Q96NL8 207 aa19.14■□□□□ 0.65
SUPT16H-208ENST00000557652 FLT4P35916 1363 aa19.14■□□□□ 0.65
SUPT16H-208ENST00000557652 IP6K1Q92551 441 aa19.13■□□□□ 0.65
SUPT16H-208ENST00000557652 MAP3K19Q56UN5 1328 aa19.13■□□□□ 0.65
SUPT16H-208ENST00000557652 CDK12Q9NYV4 1490 aaPredicted RBP19.12■□□□□ 0.65
SUPT16H-208ENST00000557652 PLEKHG5O94827 1062 aa19.11■□□□□ 0.65
SUPT16H-208ENST00000557652 AMPHP49418 695 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms