RNA–Protein interactions for RNA: ENST00000557437.1

SEC23A-214, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4

Gene SEC23A, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-214ENST00000557437 GJD4Q96KN9 370 aaPredicted RBP21.46■■□□□ 1.03
SEC23A-214ENST00000557437 NWD2Q9ULI1 1742 aa21.46■■□□□ 1.03
SEC23A-214ENST00000557437 PLCH1Q4KWH8 1693 aa21.45■■□□□ 1.02
SEC23A-214ENST00000557437 SRPK2P78362 688 aaKnown RBP21.45■■□□□ 1.02
SEC23A-214ENST00000557437 CABP2Q9NPB3 220 aa21.45■■□□□ 1.02
SEC23A-214ENST00000557437 PPIP5K1Q6PFW1 1433 aa21.44■■□□□ 1.02
SEC23A-214ENST00000557437 GLI3P10071 1580 aa21.44■■□□□ 1.02
SEC23A-214ENST00000557437 FAM83GA6ND36 823 aa21.43■■□□□ 1.02
SEC23A-214ENST00000557437 PAK3O75914 559 aaPredicted RBP21.43■■□□□ 1.02
SEC23A-214ENST00000557437 PLEKHG5O94827 1062 aa21.43■■□□□ 1.02
SEC23A-214ENST00000557437 TONSLQ96HA7 1378 aa21.43■■□□□ 1.02
SEC23A-214ENST00000557437 RALGAPBQ86X10 1494 aa21.43■■□□□ 1.02
SEC23A-214ENST00000557437 VPS72Q15906 364 aa21.41■■□□□ 1.02
SEC23A-214ENST00000557437 EVC2Q86UK5 1308 aa21.4■■□□□ 1.02
SEC23A-214ENST00000557437 SBNO2Q9Y2G9 1366 aa21.39■■□□□ 1.02
SEC23A-214ENST00000557437 COL14A1Q05707 1796 aaKnown RBP21.39■■□□□ 1.01
SEC23A-214ENST00000557437 NRAPQ86VF7 1730 aa21.39■■□□□ 1.01
SEC23A-214ENST00000557437 BRD4O60885 1362 aaPredicted RBP21.38■■□□□ 1.01
SEC23A-214ENST00000557437 PHRF1Q9P1Y6 1649 aaKnown RBP21.38■■□□□ 1.01
SEC23A-214ENST00000557437 CABP1Q9NZU7 370 aa21.37■■□□□ 1.01
SEC23A-214ENST00000557437 ATAD2Q6PL18 1390 aa21.36■■□□□ 1.01
SEC23A-214ENST00000557437 ONECUT3O60422 494 aaPredicted RBP21.36■■□□□ 1.01
SEC23A-214ENST00000557437 CARD11Q9BXL7 1154 aa21.36■■□□□ 1.01
SEC23A-214ENST00000557437 BTG4Q9NY30 223 aa21.35■■□□□ 1.01
SEC23A-214ENST00000557437 USP6P35125 1406 aa21.35■■□□□ 1.01
SEC23A-214ENST00000557437 SSH2Q76I76 1423 aa21.35■■□□□ 1.01
SEC23A-214ENST00000557437 EP400Q96L91 3159 aa21.35■■□□□ 1.01
SEC23A-214ENST00000557437 USP19O94966 1318 aa21.34■■□□□ 1.01
SEC23A-214ENST00000557437 NUTM2GQ5VZR2 741 aa21.33■■□□□ 1.01
SEC23A-214ENST00000557437 ABTB2Q8N961 1025 aa21.33■■□□□ 1.01
SEC23A-214ENST00000557437 KIAA0232Q92628 1395 aa21.33■■□□□ 1
SEC23A-214ENST00000557437 NRKQ7Z2Y5 1582 aa21.32■■□□□ 1
SEC23A-214ENST00000557437 PRDM11Q9NQV5 511 aa21.32■■□□□ 1
SEC23A-214ENST00000557437 CPDO75976 1380 aa21.29■■□□□ 1
SEC23A-214ENST00000557437 NLRP13Q86W25 1043 aa21.29■■□□□ 1
SEC23A-214ENST00000557437 SEPT12Q8IYM1 358 aa21.29■■□□□ 1
SEC23A-214ENST00000557437 CPSF1Q10570 1443 aaKnown RBP21.29■■□□□ 1
SEC23A-214ENST00000557437 ZNF692Q9BU19 519 aaPredicted RBP21.28■■□□□ 1
SEC23A-214ENST00000557437 CCDC9Q9Y3X0 531 aaKnown RBP21.28■■□□□ 1
SEC23A-214ENST00000557437 BRWD3Q6RI45 1802 aa21.27■■□□□ 1
SEC23A-214ENST00000557437 ZC3H6P61129 1189 aaKnown RBP21.27■■□□□ 1
SEC23A-214ENST00000557437 AKAP12Q02952 1782 aa21.27■■□□□ 1
SEC23A-214ENST00000557437 SPATA31A5Q5VU36 1347 aa21.27■□□□□ 0.99
SEC23A-214ENST00000557437 SPATA31A7Q8IWB4 1347 aa21.27■□□□□ 0.99
SEC23A-214ENST00000557437 PIK3C2AO00443 1686 aa21.26■□□□□ 0.99
SEC23A-214ENST00000557437 GCP02774 474 aa21.26■□□□□ 0.99
SEC23A-214ENST00000557437 CHRNA2Q15822 529 aa21.26■□□□□ 0.99
SEC23A-214ENST00000557437 SLIT3O75094 1523 aa21.25■□□□□ 0.99
SEC23A-214ENST00000557437 LMO7Q8WWI1 1683 aa21.25■□□□□ 0.99
SEC23A-214ENST00000557437 TTC21BQ7Z4L5 1316 aa21.24■□□□□ 0.99
SEC23A-214ENST00000557437 CLSPNQ9HAW4 1339 aa21.24■□□□□ 0.99
SEC23A-214ENST00000557437 CCDC125Q86Z20 511 aa21.23■□□□□ 0.99
SEC23A-214ENST00000557437 PUS7Q96PZ0 661 aaKnown RBP21.23■□□□□ 0.99
SEC23A-214ENST00000557437 TESK2Q96S53 571 aa21.23■□□□□ 0.99
SEC23A-214ENST00000557437 CAMTA1Q9Y6Y1 1673 aa21.23■□□□□ 0.99
SEC23A-214ENST00000557437 CD163L1Q9NR16 1453 aa21.22■□□□□ 0.99
SEC23A-214ENST00000557437 NLRP6P59044 892 aa21.22■□□□□ 0.99
SEC23A-214ENST00000557437 FAM98CQ17RN3 349 aaKnown RBP21.22■□□□□ 0.99
SEC23A-214ENST00000557437 SPATA31A1Q5TZJ5 1347 aa21.22■□□□□ 0.99
SEC23A-214ENST00000557437 THSD7AQ9UPZ6 1657 aa21.21■□□□□ 0.99
SEC23A-214ENST00000557437 TTC21AQ8NDW8 1320 aa21.21■□□□□ 0.99
SEC23A-214ENST00000557437 MON2Q7Z3U7 1717 aa21.21■□□□□ 0.99
SEC23A-214ENST00000557437 KRT27Q7Z3Y8 459 aa21.2■□□□□ 0.98
SEC23A-214ENST00000557437 TIMELESSQ9UNS1 1208 aa21.2■□□□□ 0.98
SEC23A-214ENST00000557437 KTN1Q86UP2 1357 aaKnown RBP21.2■□□□□ 0.98
SEC23A-214ENST00000557437 ST20-MTHFSA0A0A6YYL1 179 aa21.19■□□□□ 0.98
SEC23A-214ENST00000557437 STRN4Q9NRL3 753 aa21.18■□□□□ 0.98
SEC23A-214ENST00000557437 BLMP54132 1417 aaPredicted RBP21.18■□□□□ 0.98
SEC23A-214ENST00000557437 AATKQ6ZMQ8 1374 aa21.17■□□□□ 0.98
SEC23A-214ENST00000557437 COL5A2P05997 1499 aaPredicted RBP21.16■□□□□ 0.98
SEC23A-214ENST00000557437 SLC24A1O60721 1099 aa21.16■□□□□ 0.98
SEC23A-214ENST00000557437 PCGF6Q9BYE7 350 aa21.15■□□□□ 0.98
SEC23A-214ENST00000557437 SLC12A5Q9H2X9 1139 aa21.15■□□□□ 0.98
SEC23A-214ENST00000557437 COL18A1P39060 1754 aa21.15■□□□□ 0.98
SEC23A-214ENST00000557437 USP31Q70CQ4 1352 aa21.14■□□□□ 0.98
SEC23A-214ENST00000557437 EVA1CP58658 441 aa21.14■□□□□ 0.97
SEC23A-214ENST00000557437 LARP1Q6PKG0 1096 aaKnown RBP21.14■□□□□ 0.97
SEC23A-214ENST00000557437 BARGINQ6ZT62 677 aa21.14■□□□□ 0.97
SEC23A-214ENST00000557437 USP54Q70EL1 1684 aa21.14■□□□□ 0.97
SEC23A-214ENST00000557437 A0A0G2JS52 829 aa21.13■□□□□ 0.97
SEC23A-214ENST00000557437 MYT1Q01538 1121 aa21.13■□□□□ 0.97
SEC23A-214ENST00000557437 ARHGEF25Q86VW2 580 aa21.13■□□□□ 0.97
SEC23A-214ENST00000557437 KCNH5Q8NCM2 988 aa21.13■□□□□ 0.97
SEC23A-214ENST00000557437 NFAT5O94916 1531 aa21.13■□□□□ 0.97
SEC23A-214ENST00000557437 USP47Q96K76 1375 aa21.12■□□□□ 0.97
SEC23A-214ENST00000557437 TMC1Q8TDI8 760 aa21.12■□□□□ 0.97
SEC23A-214ENST00000557437 EDC4Q6P2E9 1401 aaKnown RBP21.12■□□□□ 0.97
SEC23A-214ENST00000557437 A0A1W2PP64 1363 aa21.11■□□□□ 0.97
SEC23A-214ENST00000557437 NINLQ9Y2I6 1382 aa21.11■□□□□ 0.97
SEC23A-214ENST00000557437 HDGFL2Q7Z4V5 671 aaPredicted RBP21.11■□□□□ 0.97
SEC23A-214ENST00000557437 TERF2IPQ9NYB0 399 aa21.1■□□□□ 0.97
SEC23A-214ENST00000557437 THRAP3Q9Y2W1 955 aaKnown RBP21.1■□□□□ 0.97
SEC23A-214ENST00000557437 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.09■□□□□ 0.97
SEC23A-214ENST00000557437 TCP11L2Q8N4U5 519 aa21.09■□□□□ 0.97
SEC23A-214ENST00000557437 AXIN2Q9Y2T1 843 aa21.09■□□□□ 0.97
SEC23A-214ENST00000557437 CRB1P82279 1406 aa21.09■□□□□ 0.97
SEC23A-214ENST00000557437 USP35Q9P2H5 1018 aa21.08■□□□□ 0.97
SEC23A-214ENST00000557437 ZRANB1Q9UGI0 708 aa21.08■□□□□ 0.97
SEC23A-214ENST00000557437 NME9Q86XW9 330 aa21.07■□□□□ 0.96
SEC23A-214ENST00000557437 ABCC6O95255 1503 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms