RNA–Protein interactions for RNA: ENST00000557344.5

APEX1-218, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-218ENST00000557344 FAM196AQ6ZSG2 479 aa15.02■□□□□ -0
APEX1-218ENST00000557344 TRPM3Q9HCF6 1732 aaPredicted RBP15.02□□□□□ -0.01
APEX1-218ENST00000557344 PARD3Q8TEW0 1356 aa15.01□□□□□ -0.01
APEX1-218ENST00000557344 GPRASP1Q5JY77 1395 aa15□□□□□ -0.01
APEX1-218ENST00000557344 ALS2Q96Q42 1657 aa15□□□□□ -0.01
APEX1-218ENST00000557344 SPATA31A1Q5TZJ5 1347 aa15□□□□□ -0.01
APEX1-218ENST00000557344 ACIN1Q9UKV3 1341 aaKnown RBP15□□□□□ -0.01
APEX1-218ENST00000557344 APBA3O96018 575 aa15□□□□□ -0.01
APEX1-218ENST00000557344 PRDM11Q9NQV5 511 aa15□□□□□ -0.01
APEX1-218ENST00000557344 POGKQ9P215 609 aa15□□□□□ -0.01
APEX1-218ENST00000557344 ADGRB2O60241 1585 aa14.99□□□□□ -0.01
APEX1-218ENST00000557344 MPHOSPH9Q99550 1183 aa14.99□□□□□ -0.01
APEX1-218ENST00000557344 DLC1Q96QB1 1528 aa14.97□□□□□ -0.01
APEX1-218ENST00000557344 PRR36Q9H6K5 1346 aa14.97□□□□□ -0.01
APEX1-218ENST00000557344 HIRIP3Q9BW71 556 aaPredicted RBP14.96□□□□□ -0.01
APEX1-218ENST00000557344 CRYBG1Q9Y4K1 1723 aa14.95□□□□□ -0.02
APEX1-218ENST00000557344 CHRNA2Q15822 529 aa14.95□□□□□ -0.02
APEX1-218ENST00000557344 NBPF8Q3BBV2 869 aa14.95□□□□□ -0.02
APEX1-218ENST00000557344 NBPF14Q5TI25 921 aa14.95□□□□□ -0.02
APEX1-218ENST00000557344 KIAA0232Q92628 1395 aa14.95□□□□□ -0.02
APEX1-218ENST00000557344 PAK3O75914 559 aaPredicted RBP14.94□□□□□ -0.02
APEX1-218ENST00000557344 NGDNQ8NEJ9 315 aaKnown RBP14.94□□□□□ -0.02
APEX1-218ENST00000557344 SPON1Q9HCB6 807 aa14.94□□□□□ -0.02
APEX1-218ENST00000557344 STRN4Q9NRL3 753 aa14.94□□□□□ -0.02
APEX1-218ENST00000557344 EIF3AQ14152 1382 aaKnown RBP14.94□□□□□ -0.02
APEX1-218ENST00000557344 RAB3GAP2Q9H2M9 1393 aa14.94□□□□□ -0.02
APEX1-218ENST00000557344 RREB1Q92766 1687 aa14.93□□□□□ -0.02
APEX1-218ENST00000557344 PDE3BQ13370 1112 aa14.93□□□□□ -0.02
APEX1-218ENST00000557344 BARGINQ6ZT62 677 aa14.93□□□□□ -0.02
APEX1-218ENST00000557344 MINK1Q8N4C8 1332 aaPredicted RBP14.92□□□□□ -0.02
APEX1-218ENST00000557344 TULP4Q9NRJ4 1543 aa14.92□□□□□ -0.02
APEX1-218ENST00000557344 WASLO00401 505 aaPredicted RBP14.92□□□□□ -0.02
APEX1-218ENST00000557344 KCNQ2O43526 872 aa14.92□□□□□ -0.02
APEX1-218ENST00000557344 USP35Q9P2H5 1018 aa14.92□□□□□ -0.02
APEX1-218ENST00000557344 PPP1R1BQ9UD71 204 aaPredicted RBP14.92□□□□□ -0.02
APEX1-218ENST00000557344 TRAK1Q9UPV9 953 aa14.92□□□□□ -0.02
APEX1-218ENST00000557344 NUP188Q5SRE5 1749 aa14.92□□□□□ -0.02
APEX1-218ENST00000557344 NINLQ9Y2I6 1382 aa14.91□□□□□ -0.02
APEX1-218ENST00000557344 DCAF8L1A6NGE4 600 aa14.91□□□□□ -0.02
APEX1-218ENST00000557344 ADGRB1O14514 1584 aa14.9□□□□□ -0.02
APEX1-218ENST00000557344 ZC3H6P61129 1189 aaKnown RBP14.9□□□□□ -0.02
APEX1-218ENST00000557344 EVA1CP58658 441 aa14.89□□□□□ -0.03
APEX1-218ENST00000557344 SSH2Q76I76 1423 aa14.89□□□□□ -0.03
APEX1-218ENST00000557344 TCP11L2Q8N4U5 519 aa14.88□□□□□ -0.03
APEX1-218ENST00000557344 NUTM2GQ5VZR2 741 aa14.87□□□□□ -0.03
APEX1-218ENST00000557344 LARP1Q6PKG0 1096 aaKnown RBP14.87□□□□□ -0.03
APEX1-218ENST00000557344 NUDT16Q96DE0 195 aaKnown RBP14.86□□□□□ -0.03
APEX1-218ENST00000557344 PHRF1Q9P1Y6 1649 aaKnown RBP14.85□□□□□ -0.03
APEX1-218ENST00000557344 CAMTA1Q9Y6Y1 1673 aa14.85□□□□□ -0.03
APEX1-218ENST00000557344 ATP7BP35670 1465 aa14.85□□□□□ -0.03
APEX1-218ENST00000557344 THRAP3Q9Y2W1 955 aaKnown RBP14.85□□□□□ -0.03
APEX1-218ENST00000557344 C11orf95C9JLR9 678 aaPredicted RBP14.84□□□□□ -0.03
APEX1-218ENST00000557344 CPDO75976 1380 aa14.83□□□□□ -0.04
APEX1-218ENST00000557344 PLSCR1O15162 318 aa14.82□□□□□ -0.04
APEX1-218ENST00000557344 ZNF784Q8NCA9 323 aaPredicted RBP14.82□□□□□ -0.04
APEX1-218ENST00000557344 POLR3AO14802 1390 aaPredicted RBP14.82□□□□□ -0.04
APEX1-218ENST00000557344 ANO8Q9HCE9 1232 aaPredicted RBP14.81□□□□□ -0.04
APEX1-218ENST00000557344 ACEP12821 1306 aa14.81□□□□□ -0.04
APEX1-218ENST00000557344 LMO7Q8WWI1 1683 aa14.81□□□□□ -0.04
APEX1-218ENST00000557344 ABTB2Q8N961 1025 aa14.8□□□□□ -0.04
APEX1-218ENST00000557344 KDM2AQ9Y2K7 1162 aa14.8□□□□□ -0.04
APEX1-218ENST00000557344 USP19O94966 1318 aa14.8□□□□□ -0.04
APEX1-218ENST00000557344 NRKQ7Z2Y5 1582 aa14.8□□□□□ -0.04
APEX1-218ENST00000557344 ITSN1Q15811 1721 aa14.8□□□□□ -0.04
APEX1-218ENST00000557344 OVOS2A0A0G2JMS6 1433 aa14.79□□□□□ -0.04
APEX1-218ENST00000557344 OVOS2A0A0J9YW53 1432 aa14.79□□□□□ -0.04
APEX1-218ENST00000557344 PLEKHG3A1L390 1219 aa14.79□□□□□ -0.04
APEX1-218ENST00000557344 OVOS2Q6IE36 1432 aa14.79□□□□□ -0.04
APEX1-218ENST00000557344 CDK19Q9BWU1 502 aa14.79□□□□□ -0.04
APEX1-218ENST00000557344 PDGFDQ9GZP0 370 aaPredicted RBP14.79□□□□□ -0.04
APEX1-218ENST00000557344 PARP4Q9UKK3 1724 aaKnown RBP14.79□□□□□ -0.04
APEX1-218ENST00000557344 CCDC61Q9Y6R9 512 aa14.79□□□□□ -0.04
APEX1-218ENST00000557344 GCP02774 474 aa14.78□□□□□ -0.04
APEX1-218ENST00000557344 PTGER2P43116 358 aa14.78□□□□□ -0.04
APEX1-218ENST00000557344 DCAF11Q8TEB1 546 aa14.78□□□□□ -0.04
APEX1-218ENST00000557344 RGPD3A6NKT7 1758 aaPredicted RBP14.78□□□□□ -0.04
APEX1-218ENST00000557344 RGPD4Q7Z3J3 1758 aa14.78□□□□□ -0.04
APEX1-218ENST00000557344 CASZ1Q86V15 1759 aa14.78□□□□□ -0.04
APEX1-218ENST00000557344 PEAK1Q9H792 1746 aa14.78□□□□□ -0.04
APEX1-218ENST00000557344 COL5A2P05997 1499 aaPredicted RBP14.77□□□□□ -0.04
APEX1-218ENST00000557344 ZBTB7AO95365 584 aa14.77□□□□□ -0.05
APEX1-218ENST00000557344 PTF1AQ7RTS3 328 aa14.77□□□□□ -0.05
APEX1-218ENST00000557344 PROM2Q8N271 834 aa14.77□□□□□ -0.05
APEX1-218ENST00000557344 STAC3Q96MF2 364 aa14.77□□□□□ -0.05
APEX1-218ENST00000557344 BCL11BQ9C0K0 894 aaPredicted RBP14.77□□□□□ -0.05
APEX1-218ENST00000557344 CRB1P82279 1406 aa14.76□□□□□ -0.05
APEX1-218ENST00000557344 NLRP13Q86W25 1043 aa14.76□□□□□ -0.05
APEX1-218ENST00000557344 ARHGEF28Q8N1W1 1705 aaKnown RBP14.75□□□□□ -0.05
APEX1-218ENST00000557344 SBF2Q86WG5 1849 aa14.74□□□□□ -0.05
APEX1-218ENST00000557344 DDB1Q16531 1140 aa14.74□□□□□ -0.05
APEX1-218ENST00000557344 SYT17Q9BSW7 474 aa14.74□□□□□ -0.05
APEX1-218ENST00000557344 ATF5Q9Y2D1 282 aaPredicted RBP14.74□□□□□ -0.05
APEX1-218ENST00000557344 TOPAZ1Q8N9V7 1692 aa14.74□□□□□ -0.05
APEX1-218ENST00000557344 SENP3-EIF4A1A0A087X0R7 540 aa14.73□□□□□ -0.05
APEX1-218ENST00000557344 FHDC1Q9C0D6 1143 aaPredicted RBP14.73□□□□□ -0.05
APEX1-218ENST00000557344 MYOM1P52179 1685 aa14.73□□□□□ -0.05
APEX1-218ENST00000557344 C1QTNF8P60827 252 aa14.72□□□□□ -0.05
APEX1-218ENST00000557344 BCL9O00512 1426 aa14.72□□□□□ -0.05
APEX1-218ENST00000557344 AATKQ6ZMQ8 1374 aa14.72□□□□□ -0.05
APEX1-218ENST00000557344 LRRC37A3O60309 1634 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms