RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 PLEKHG5O94827 1062 aa15.02■□□□□ -0
RDH11-210ENST00000557331 ABCA3Q99758 1704 aa15.01□□□□□ -0.01
RDH11-210ENST00000557331 EN1Q05925 392 aaPredicted RBP15.01□□□□□ -0.01
RDH11-210ENST00000557331 TRAK1Q9UPV9 953 aa15.01□□□□□ -0.01
RDH11-210ENST00000557331 PSDA5PKW4 1024 aaPredicted RBP15□□□□□ -0.01
RDH11-210ENST00000557331 PAK3O75914 559 aaPredicted RBP15□□□□□ -0.01
RDH11-210ENST00000557331 TULP4Q9NRJ4 1543 aa15□□□□□ -0.01
RDH11-210ENST00000557331 RGPD1P0DJD0 1748 aa15□□□□□ -0.01
RDH11-210ENST00000557331 SPATA31A1Q5TZJ5 1347 aa14.98□□□□□ -0.01
RDH11-210ENST00000557331 MINK1Q8N4C8 1332 aaPredicted RBP14.98□□□□□ -0.01
RDH11-210ENST00000557331 NRAPQ86VF7 1730 aa14.98□□□□□ -0.01
RDH11-210ENST00000557331 HIRIP3Q9BW71 556 aaPredicted RBP14.98□□□□□ -0.01
RDH11-210ENST00000557331 TRPM3Q9HCF6 1732 aaPredicted RBP14.97□□□□□ -0.01
RDH11-210ENST00000557331 ALS2Q96Q42 1657 aa14.97□□□□□ -0.01
RDH11-210ENST00000557331 BARGINQ6ZT62 677 aa14.97□□□□□ -0.01
RDH11-210ENST00000557331 ADGRB1O14514 1584 aa14.97□□□□□ -0.01
RDH11-210ENST00000557331 PRR36Q9H6K5 1346 aa14.96□□□□□ -0.01
RDH11-210ENST00000557331 EVA1CP58658 441 aa14.96□□□□□ -0.01
RDH11-210ENST00000557331 PDE3BQ13370 1112 aa14.96□□□□□ -0.01
RDH11-210ENST00000557331 R3HDM1Q15032 1099 aaKnown RBP14.96□□□□□ -0.01
RDH11-210ENST00000557331 NBPF8Q3BBV2 869 aa14.96□□□□□ -0.01
RDH11-210ENST00000557331 NBPF14Q5TI25 921 aa14.96□□□□□ -0.01
RDH11-210ENST00000557331 DCAF11Q8TEB1 546 aa14.96□□□□□ -0.01
RDH11-210ENST00000557331 ATP7BP35670 1465 aa14.95□□□□□ -0.02
RDH11-210ENST00000557331 NUDT16Q96DE0 195 aaKnown RBP14.95□□□□□ -0.02
RDH11-210ENST00000557331 CAMKK2Q96RR4 588 aa14.95□□□□□ -0.02
RDH11-210ENST00000557331 THRAP3Q9Y2W1 955 aaKnown RBP14.95□□□□□ -0.02
RDH11-210ENST00000557331 CCDC61Q9Y6R9 512 aa14.94□□□□□ -0.02
RDH11-210ENST00000557331 KIAA0232Q92628 1395 aa14.94□□□□□ -0.02
RDH11-210ENST00000557331 THSD7AQ9UPZ6 1657 aa14.93□□□□□ -0.02
RDH11-210ENST00000557331 DCAF8L1A6NGE4 600 aa14.93□□□□□ -0.02
RDH11-210ENST00000557331 TRIM37O94972 964 aa14.93□□□□□ -0.02
RDH11-210ENST00000557331 APBA3O96018 575 aa14.93□□□□□ -0.02
RDH11-210ENST00000557331 EZH2Q15910 746 aaKnown RBP14.93□□□□□ -0.02
RDH11-210ENST00000557331 KDM2AQ9Y2K7 1162 aa14.93□□□□□ -0.02
RDH11-210ENST00000557331 TCP11L2Q8N4U5 519 aa14.92□□□□□ -0.02
RDH11-210ENST00000557331 ITSN1Q15811 1721 aa14.92□□□□□ -0.02
RDH11-210ENST00000557331 POLR3AO14802 1390 aaPredicted RBP14.91□□□□□ -0.02
RDH11-210ENST00000557331 BRD4O60885 1362 aaPredicted RBP14.91□□□□□ -0.02
RDH11-210ENST00000557331 PLEKHG3A1L390 1219 aa14.91□□□□□ -0.02
RDH11-210ENST00000557331 FAM182BQ5T319 152 aa14.91□□□□□ -0.02
RDH11-210ENST00000557331 STRN4Q9NRL3 753 aa14.91□□□□□ -0.02
RDH11-210ENST00000557331 CPDO75976 1380 aa14.9□□□□□ -0.02
RDH11-210ENST00000557331 CDK19Q9BWU1 502 aa14.9□□□□□ -0.02
RDH11-210ENST00000557331 RAB3GAP2Q9H2M9 1393 aa14.89□□□□□ -0.03
RDH11-210ENST00000557331 ZC3H6P61129 1189 aaKnown RBP14.89□□□□□ -0.03
RDH11-210ENST00000557331 NLRP13Q86W25 1043 aa14.89□□□□□ -0.03
RDH11-210ENST00000557331 ABTB2Q8N961 1025 aa14.89□□□□□ -0.03
RDH11-210ENST00000557331 CHRNA2Q15822 529 aa14.88□□□□□ -0.03
RDH11-210ENST00000557331 SSH2Q76I76 1423 aa14.88□□□□□ -0.03
RDH11-210ENST00000557331 ACEP12821 1306 aa14.88□□□□□ -0.03
RDH11-210ENST00000557331 TNS1Q9HBL0 1735 aaKnown RBP14.87□□□□□ -0.03
RDH11-210ENST00000557331 CRYBG1Q9Y4K1 1723 aa14.87□□□□□ -0.03
RDH11-210ENST00000557331 SPON1Q9HCB6 807 aa14.87□□□□□ -0.03
RDH11-210ENST00000557331 USP35Q9P2H5 1018 aa14.87□□□□□ -0.03
RDH11-210ENST00000557331 PPP1R1BQ9UD71 204 aaPredicted RBP14.85□□□□□ -0.03
RDH11-210ENST00000557331 USP19O94966 1318 aa14.85□□□□□ -0.03
RDH11-210ENST00000557331 PLSCR1O15162 318 aa14.84□□□□□ -0.03
RDH11-210ENST00000557331 GCP02774 474 aa14.84□□□□□ -0.03
RDH11-210ENST00000557331 LARP1Q6PKG0 1096 aaKnown RBP14.84□□□□□ -0.03
RDH11-210ENST00000557331 CDCA7Q9BWT1 371 aaPredicted RBP14.84□□□□□ -0.03
RDH11-210ENST00000557331 KCNQ2O43526 872 aa14.83□□□□□ -0.04
RDH11-210ENST00000557331 YY1P25490 414 aa14.83□□□□□ -0.04
RDH11-210ENST00000557331 NUTM2GQ5VZR2 741 aa14.83□□□□□ -0.04
RDH11-210ENST00000557331 NINLQ9Y2I6 1382 aa14.83□□□□□ -0.04
RDH11-210ENST00000557331 PHRF1Q9P1Y6 1649 aaKnown RBP14.81□□□□□ -0.04
RDH11-210ENST00000557331 ARHGEF28Q8N1W1 1705 aaKnown RBP14.81□□□□□ -0.04
RDH11-210ENST00000557331 CAMTA1Q9Y6Y1 1673 aa14.81□□□□□ -0.04
RDH11-210ENST00000557331 SRPK2P78362 688 aaKnown RBP14.8□□□□□ -0.04
RDH11-210ENST00000557331 OVOS2A0A0G2JMS6 1433 aa14.8□□□□□ -0.04
RDH11-210ENST00000557331 OVOS2A0A0J9YW53 1432 aa14.8□□□□□ -0.04
RDH11-210ENST00000557331 CRB1P82279 1406 aa14.8□□□□□ -0.04
RDH11-210ENST00000557331 OVOS2Q6IE36 1432 aa14.8□□□□□ -0.04
RDH11-210ENST00000557331 DDB1Q16531 1140 aa14.79□□□□□ -0.04
RDH11-210ENST00000557331 AATKQ6ZMQ8 1374 aa14.79□□□□□ -0.04
RDH11-210ENST00000557331 BCL11BQ9C0K0 894 aaPredicted RBP14.79□□□□□ -0.04
RDH11-210ENST00000557331 KIAA1210Q9ULL0 1709 aa14.79□□□□□ -0.04
RDH11-210ENST00000557331 RREB1Q92766 1687 aa14.78□□□□□ -0.04
RDH11-210ENST00000557331 NRKQ7Z2Y5 1582 aa14.77□□□□□ -0.04
RDH11-210ENST00000557331 COL5A2P05997 1499 aaPredicted RBP14.77□□□□□ -0.04
RDH11-210ENST00000557331 BCL9O00512 1426 aa14.77□□□□□ -0.04
RDH11-210ENST00000557331 PPIP5K1Q6PFW1 1433 aa14.77□□□□□ -0.04
RDH11-210ENST00000557331 CENPJQ9HC77 1338 aaPredicted RBP14.77□□□□□ -0.04
RDH11-210ENST00000557331 NLRP6P59044 892 aa14.77□□□□□ -0.05
RDH11-210ENST00000557331 ZNF692Q9BU19 519 aaPredicted RBP14.77□□□□□ -0.05
RDH11-210ENST00000557331 TOPAZ1Q8N9V7 1692 aa14.77□□□□□ -0.05
RDH11-210ENST00000557331 LMO7Q8WWI1 1683 aa14.77□□□□□ -0.05
RDH11-210ENST00000557331 PARP4Q9UKK3 1724 aaKnown RBP14.76□□□□□ -0.05
RDH11-210ENST00000557331 KCNH5Q8NCM2 988 aa14.76□□□□□ -0.05
RDH11-210ENST00000557331 TOM1L2Q6ZVM7 507 aa14.75□□□□□ -0.05
RDH11-210ENST00000557331 RGPD3A6NKT7 1758 aaPredicted RBP14.75□□□□□ -0.05
RDH11-210ENST00000557331 RGPD4Q7Z3J3 1758 aa14.75□□□□□ -0.05
RDH11-210ENST00000557331 NUP188Q5SRE5 1749 aa14.75□□□□□ -0.05
RDH11-210ENST00000557331 WDR17Q8IZU2 1322 aa14.73□□□□□ -0.05
RDH11-210ENST00000557331 CABP1Q9NZU7 370 aa14.73□□□□□ -0.05
RDH11-210ENST00000557331 EVC2Q86UK5 1308 aa14.72□□□□□ -0.05
RDH11-210ENST00000557331 CABP2Q9NPB3 220 aa14.72□□□□□ -0.05
RDH11-210ENST00000557331 USP6P35125 1406 aa14.72□□□□□ -0.05
RDH11-210ENST00000557331 EXOC5O00471 708 aa14.71□□□□□ -0.05
RDH11-210ENST00000557331 NBPF1Q3BBV0 1214 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms