RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 EIF3AQ14152 1382 aaKnown RBP18.14■□□□□ 0.49
SNX6-209ENST00000557265 PRDM11Q9NQV5 511 aa18.13■□□□□ 0.49
SNX6-209ENST00000557265 ABCA3Q99758 1704 aa18.12■□□□□ 0.49
SNX6-209ENST00000557265 DCAF11Q8TEB1 546 aa18.12■□□□□ 0.49
SNX6-209ENST00000557265 ADGRB1O14514 1584 aa18.12■□□□□ 0.49
SNX6-209ENST00000557265 R3HDM1Q15032 1099 aaKnown RBP18.11■□□□□ 0.49
SNX6-209ENST00000557265 ADGRB2O60241 1585 aa18.11■□□□□ 0.49
SNX6-209ENST00000557265 LRP5O75197 1615 aa18.09■□□□□ 0.49
SNX6-209ENST00000557265 TULP4Q9NRJ4 1543 aa18.09■□□□□ 0.49
SNX6-209ENST00000557265 CHRNA2Q15822 529 aa18.09■□□□□ 0.49
SNX6-209ENST00000557265 TRPM3Q9HCF6 1732 aaPredicted RBP18.09■□□□□ 0.49
SNX6-209ENST00000557265 EZH2Q15910 746 aaKnown RBP18.08■□□□□ 0.48
SNX6-209ENST00000557265 STRN4Q9NRL3 753 aa18.08■□□□□ 0.48
SNX6-209ENST00000557265 COL14A1Q05707 1796 aaKnown RBP18.08■□□□□ 0.48
SNX6-209ENST00000557265 NRAPQ86VF7 1730 aa18.08■□□□□ 0.48
SNX6-209ENST00000557265 KIAA0232Q92628 1395 aa18.07■□□□□ 0.48
SNX6-209ENST00000557265 RAB3GAP2Q9H2M9 1393 aa18.07■□□□□ 0.48
SNX6-209ENST00000557265 SPATA31A1Q5TZJ5 1347 aa18.07■□□□□ 0.48
SNX6-209ENST00000557265 NUDT16Q96DE0 195 aaKnown RBP18.07■□□□□ 0.48
SNX6-209ENST00000557265 ALS2Q96Q42 1657 aa18.06■□□□□ 0.48
SNX6-209ENST00000557265 TRIM37O94972 964 aa18.06■□□□□ 0.48
SNX6-209ENST00000557265 ZC3H6P61129 1189 aaKnown RBP18.06■□□□□ 0.48
SNX6-209ENST00000557265 NUTM2GQ5VZR2 741 aa18.05■□□□□ 0.48
SNX6-209ENST00000557265 FAM196AQ6ZSG2 479 aa18.05■□□□□ 0.48
SNX6-209ENST00000557265 STAC3Q96MF2 364 aa18.05■□□□□ 0.48
SNX6-209ENST00000557265 CAMKK2Q96RR4 588 aa18.05■□□□□ 0.48
SNX6-209ENST00000557265 DISP2A7MBM2 1401 aa18.05■□□□□ 0.48
SNX6-209ENST00000557265 USP35Q9P2H5 1018 aa18.04■□□□□ 0.48
SNX6-209ENST00000557265 APBA3O96018 575 aa18.03■□□□□ 0.48
SNX6-209ENST00000557265 CDK19Q9BWU1 502 aa18.03■□□□□ 0.48
SNX6-209ENST00000557265 EVA1CP58658 441 aa18.02■□□□□ 0.48
SNX6-209ENST00000557265 NBPF8Q3BBV2 869 aa18.01■□□□□ 0.47
SNX6-209ENST00000557265 THSD7AQ9UPZ6 1657 aa18.01■□□□□ 0.47
SNX6-209ENST00000557265 PDE3BQ13370 1112 aa18■□□□□ 0.47
SNX6-209ENST00000557265 RGPD1P0DJD0 1748 aa18■□□□□ 0.47
SNX6-209ENST00000557265 ATP7BP35670 1465 aa18■□□□□ 0.47
SNX6-209ENST00000557265 ACEP12821 1306 aa17.99■□□□□ 0.47
SNX6-209ENST00000557265 BARGINQ6ZT62 677 aa17.99■□□□□ 0.47
SNX6-209ENST00000557265 CCDC61Q9Y6R9 512 aa17.99■□□□□ 0.47
SNX6-209ENST00000557265 LARP1Q6PKG0 1096 aaKnown RBP17.98■□□□□ 0.47
SNX6-209ENST00000557265 POLR3AO14802 1390 aaPredicted RBP17.97■□□□□ 0.47
SNX6-209ENST00000557265 ABTB2Q8N961 1025 aa17.97■□□□□ 0.47
SNX6-209ENST00000557265 CRYBG1Q9Y4K1 1723 aa17.97■□□□□ 0.47
SNX6-209ENST00000557265 SSH2Q76I76 1423 aa17.97■□□□□ 0.47
SNX6-209ENST00000557265 PARD3Q8TEW0 1356 aa17.96■□□□□ 0.47
SNX6-209ENST00000557265 PLEKHG3A1L390 1219 aa17.96■□□□□ 0.47
SNX6-209ENST00000557265 TCP11L2Q8N4U5 519 aa17.96■□□□□ 0.47
SNX6-209ENST00000557265 TNS1Q9HBL0 1735 aaKnown RBP17.94■□□□□ 0.46
SNX6-209ENST00000557265 NBPF14Q5TI25 921 aa17.93■□□□□ 0.46
SNX6-209ENST00000557265 GCP02774 474 aa17.92■□□□□ 0.46
SNX6-209ENST00000557265 CAMTA1Q9Y6Y1 1673 aa17.92■□□□□ 0.46
SNX6-209ENST00000557265 USP19O94966 1318 aa17.92■□□□□ 0.46
SNX6-209ENST00000557265 CPDO75976 1380 aa17.91■□□□□ 0.46
SNX6-209ENST00000557265 NLRP13Q86W25 1043 aa17.91■□□□□ 0.46
SNX6-209ENST00000557265 THRAP3Q9Y2W1 955 aaKnown RBP17.91■□□□□ 0.46
SNX6-209ENST00000557265 SRPK2P78362 688 aaKnown RBP17.9■□□□□ 0.46
SNX6-209ENST00000557265 NBPF1Q3BBV0 1214 aa17.9■□□□□ 0.46
SNX6-209ENST00000557265 PHRF1Q9P1Y6 1649 aaKnown RBP17.9■□□□□ 0.46
SNX6-209ENST00000557265 ARHGEF28Q8N1W1 1705 aaKnown RBP17.89■□□□□ 0.46
SNX6-209ENST00000557265 ITSN1Q15811 1721 aa17.89■□□□□ 0.45
SNX6-209ENST00000557265 CABP2Q9NPB3 220 aa17.88■□□□□ 0.45
SNX6-209ENST00000557265 ZBTB7CA1YPR0 619 aa17.87■□□□□ 0.45
SNX6-209ENST00000557265 NRKQ7Z2Y5 1582 aa17.87■□□□□ 0.45
SNX6-209ENST00000557265 SPON1Q9HCB6 807 aa17.86■□□□□ 0.45
SNX6-209ENST00000557265 PPIP5K1Q6PFW1 1433 aa17.86■□□□□ 0.45
SNX6-209ENST00000557265 C11orf95C9JLR9 678 aaPredicted RBP17.85■□□□□ 0.45
SNX6-209ENST00000557265 COL5A2P05997 1499 aaPredicted RBP17.85■□□□□ 0.45
SNX6-209ENST00000557265 YY1P25490 414 aa17.85■□□□□ 0.45
SNX6-209ENST00000557265 NLRP6P59044 892 aa17.85■□□□□ 0.45
SNX6-209ENST00000557265 PPP1R1BQ9UD71 204 aaPredicted RBP17.85■□□□□ 0.45
SNX6-209ENST00000557265 CENPJQ9HC77 1338 aaPredicted RBP17.84■□□□□ 0.45
SNX6-209ENST00000557265 KCNQ2O43526 872 aa17.84■□□□□ 0.45
SNX6-209ENST00000557265 CABP1Q9NZU7 370 aa17.84■□□□□ 0.45
SNX6-209ENST00000557265 TOPAZ1Q8N9V7 1692 aa17.83■□□□□ 0.45
SNX6-209ENST00000557265 LMO7Q8WWI1 1683 aa17.83■□□□□ 0.45
SNX6-209ENST00000557265 CRB1P82279 1406 aa17.83■□□□□ 0.45
SNX6-209ENST00000557265 BRD4O60885 1362 aaPredicted RBP17.82■□□□□ 0.44
SNX6-209ENST00000557265 AATKQ6ZMQ8 1374 aa17.81■□□□□ 0.44
SNX6-209ENST00000557265 PLSCR1O15162 318 aa17.81■□□□□ 0.44
SNX6-209ENST00000557265 DDB1Q16531 1140 aa17.81■□□□□ 0.44
SNX6-209ENST00000557265 TOM1L2Q6ZVM7 507 aa17.81■□□□□ 0.44
SNX6-209ENST00000557265 OVOS2A0A0G2JMS6 1433 aa17.81■□□□□ 0.44
SNX6-209ENST00000557265 OVOS2A0A0J9YW53 1432 aa17.81■□□□□ 0.44
SNX6-209ENST00000557265 OVOS2Q6IE36 1432 aa17.81■□□□□ 0.44
SNX6-209ENST00000557265 RREB1Q92766 1687 aa17.8■□□□□ 0.44
SNX6-209ENST00000557265 NUP188Q5SRE5 1749 aa17.79■□□□□ 0.44
SNX6-209ENST00000557265 DCAF8L1A6NGE4 600 aa17.79■□□□□ 0.44
SNX6-209ENST00000557265 PTF1AQ7RTS3 328 aa17.79■□□□□ 0.44
SNX6-209ENST00000557265 BCL11BQ9C0K0 894 aaPredicted RBP17.79■□□□□ 0.44
SNX6-209ENST00000557265 USP6P35125 1406 aa17.79■□□□□ 0.44
SNX6-209ENST00000557265 ANO8Q9HCE9 1232 aaPredicted RBP17.78■□□□□ 0.44
SNX6-209ENST00000557265 AXIN2Q9Y2T1 843 aa17.78■□□□□ 0.44
SNX6-209ENST00000557265 NINLQ9Y2I6 1382 aa17.77■□□□□ 0.43
SNX6-209ENST00000557265 PROM2Q8N271 834 aa17.76■□□□□ 0.43
SNX6-209ENST00000557265 MARCH10Q8NA82 808 aaPredicted RBP17.76■□□□□ 0.43
SNX6-209ENST00000557265 WDR17Q8IZU2 1322 aa17.75■□□□□ 0.43
SNX6-209ENST00000557265 CDCA7Q9BWT1 371 aaPredicted RBP17.75■□□□□ 0.43
SNX6-209ENST00000557265 PDGFDQ9GZP0 370 aaPredicted RBP17.75■□□□□ 0.43
SNX6-209ENST00000557265 PARP4Q9UKK3 1724 aaKnown RBP17.75■□□□□ 0.43
SNX6-209ENST00000557265 KIAA1210Q9ULL0 1709 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms